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The map label for this gene is 45358757

Identifier: 45358757

GI number: 45358757

Start: 1180541

End: 1182589

Strand: Direct

Name: 45358757

Synonym: MMP1194

Alternate gene names: NA

Gene position: 1180541-1182589 (Clockwise)

Preceding gene: 45358756

Following gene: 45358758

Centisome position: 71.07

GC content: 39.43

Gene sequence:

>2049_bases
ATGAAAAAAATATATACGGTATTATTAGTATTTGCACTTGTTTCCTGTTTAAGTATTGTATCTGCAGACTCTATTCCTCA
ATTTCCTCATACATTTTATGGGGATGTAACAATAAATGAACTTCCCGCAACGGGAACACTGAAAGTACTTGTCAATGGAG
TAGAAAGTGAACAAGTGCAGGTTACGGATGGTGAATTTGGTAAAGGATTGTTTGATGCCAAATTAGTTGTTAATGGTGCT
TCAGGGGATCAGATTACCTTTTCATTTGAATCAGAAGGTTATACATTAGATTCAGATTATAAAATATATCTTATAGATTC
GGAACAGTATGTTTCAGAAATCGACTTTGTATCTGGAGGATACACTGAAATATTATTAGAATTCACCGGAACGGGAGACG
GTGGAGATACCGGTGACACAGGGGATACTGGAGATACCGGTGACACAGGGGATACTGGAGATACCGGTGACACAGGGGAT
ACTGGAGATACCGGTGACACAGGGGATACTGGAGATACCGGTGACACAGGGGATACTGGAGATACCGGTGACACAGGGGA
TACTGGAAATGGTGAAGAATTGCCACTTAATCCAGGTGTATTCTATGGATTAGTTTATTTAGATGAATCCTTAGCATCAA
GTACCTTGAATTTGTATGTTGATGGAGTACTTCAAGATTCTATTGGAATTGAAAATGGAGTCTTTGGAGGAGAAGGAGCT
CTCGATGATAAATTGATTGCAACCGGATACGATGGTAACAGTAACGTGGTTACGTTTTCATTAGTTTCTGGAGGAGAAAC
TTACTCCAGCTTTACTGCAGAATTGTCTGATGCTACTTATGAAGATGAACTCCCATACATTGAAGGAGTGCATTATGTGG
TACTTACGTTCTCAGAAACTGCTGATACTGGAAATGGTGAAGAATTGCCACTTAATCCTGATGTATTCTATGGATTAGTT
TATTTAGATGAATCCTTAGCATCAAGTACCTTGAATTTGTATGTTGATGGAGTACTTCAAGATTCTATTGGAATTGAAAA
TGGAGTCTTTGGAGGAGAAGGAGCTCTCGATGATAAATTGATTGCAACCGGATACGATGGTAACAGTAACGTGGTTACGT
TTTCATTAGTTTCTGGAGGAGAAACTTACTCCAGCTTTACTGCAGAATTGTCTGATGCTACGTATGAAGATGAACTTCCT
TACATTGAAGGAGTGCATTATGTGGTACTTACGTTCTCAGAAATTGCTGATACAGGGGATACTGGAGACAGTGGAGATAC
GGGTAATATAAACAGTAGTGAACAATTACCACTTAATCCTGACATATTCTACGGAATGGTATATTTAGATGAAGCCCTAG
CATCAAGTACATTGAATTTGTATGTTGATGGGGCACTCCAAAATTCAATTGGAATTGAAAATGGAGTATTTGGAGGAGAA
GGACCTCTTGATAATAAATTGATTGCAACCGGATACGATGGTAACAGTAACGTGGTTACGTTTTCATTAGTTTCTGGAGG
AGAAACTTACTCCAGCTTTACTGCAGAATTGTCTGATGCTACGTATGAAGATGAACTTCCGTACATTGAAGGAGTGCATT
ATGTGGTACTTACGTTCTCAGAAACTGCTGATACAGGGGATACTGGAGATACTAGCGATTCTGGAAGTAGCAGTGGAGGC
GGAGGTGGCGGATCTAGCAGAAGCAGTTCGTCAAGCTCTTCGTCAATTATAAGCAGTTCAGATTCATCAGAAACTCCTGT
TACAACAAGTGTTCCTAAAACTTCAAGTTCAGGAACATCAACTGATTCATCATCAAATACTGTTGAATCTTCAGAAAATG
TTGGACCAGATACCACACAAGATTCACCTGATGACACACTAGACTATGGATCAGACAGTAATGAAACTGGAGTTGTATTA
CAACAGGAAAGTCCACTCGGTGGAATAAATATGTACCTTGCACTGGCTGCAATATTATTAATATTAATTGCACTGGCTGC
AGCTTGGTACCAATCAAAAGAAAAACCAGAAGTTGTGCCTCAGCAGTAA

Upstream 100 bases:

>100_bases
ACTGGGCATATTCAGACTCAGAATGCAACTTTGCAGGACAGTAAATACTAATAATGGCTGAAAATTAAAATTCAGCCATC
CTCTTCTTTGGGGTGTAAAA

Downstream 100 bases:

>100_bases
CTTCTTTATATTTTACTTTTTTTGTGAAAGTTTTTTAAAACAGTAATTAAAACAGAAATATGGGTTTCGTTTTTGAAATT
TTTATATTATTTTCGGGATA

Product: triple helix repeat-containing collagen

Products: NA

Alternate protein names: Surface Protein Anchor Region; Surface Protein

Number of amino acids: Translated: 682; Mature: 682

Protein sequence:

>682_residues
MKKIYTVLLVFALVSCLSIVSADSIPQFPHTFYGDVTINELPATGTLKVLVNGVESEQVQVTDGEFGKGLFDAKLVVNGA
SGDQITFSFESEGYTLDSDYKIYLIDSEQYVSEIDFVSGGYTEILLEFTGTGDGGDTGDTGDTGDTGDTGDTGDTGDTGD
TGDTGDTGDTGDTGDTGDTGDTGDTGDTGNGEELPLNPGVFYGLVYLDESLASSTLNLYVDGVLQDSIGIENGVFGGEGA
LDDKLIATGYDGNSNVVTFSLVSGGETYSSFTAELSDATYEDELPYIEGVHYVVLTFSETADTGNGEELPLNPDVFYGLV
YLDESLASSTLNLYVDGVLQDSIGIENGVFGGEGALDDKLIATGYDGNSNVVTFSLVSGGETYSSFTAELSDATYEDELP
YIEGVHYVVLTFSEIADTGDTGDSGDTGNINSSEQLPLNPDIFYGMVYLDEALASSTLNLYVDGALQNSIGIENGVFGGE
GPLDNKLIATGYDGNSNVVTFSLVSGGETYSSFTAELSDATYEDELPYIEGVHYVVLTFSETADTGDTGDTSDSGSSSGG
GGGGSSRSSSSSSSSIISSSDSSETPVTTSVPKTSSSGTSTDSSSNTVESSENVGPDTTQDSPDDTLDYGSDSNETGVVL
QQESPLGGINMYLALAAILLILIALAAAWYQSKEKPEVVPQQ

Sequences:

>Translated_682_residues
MKKIYTVLLVFALVSCLSIVSADSIPQFPHTFYGDVTINELPATGTLKVLVNGVESEQVQVTDGEFGKGLFDAKLVVNGA
SGDQITFSFESEGYTLDSDYKIYLIDSEQYVSEIDFVSGGYTEILLEFTGTGDGGDTGDTGDTGDTGDTGDTGDTGDTGD
TGDTGDTGDTGDTGDTGDTGDTGDTGDTGNGEELPLNPGVFYGLVYLDESLASSTLNLYVDGVLQDSIGIENGVFGGEGA
LDDKLIATGYDGNSNVVTFSLVSGGETYSSFTAELSDATYEDELPYIEGVHYVVLTFSETADTGNGEELPLNPDVFYGLV
YLDESLASSTLNLYVDGVLQDSIGIENGVFGGEGALDDKLIATGYDGNSNVVTFSLVSGGETYSSFTAELSDATYEDELP
YIEGVHYVVLTFSEIADTGDTGDSGDTGNINSSEQLPLNPDIFYGMVYLDEALASSTLNLYVDGALQNSIGIENGVFGGE
GPLDNKLIATGYDGNSNVVTFSLVSGGETYSSFTAELSDATYEDELPYIEGVHYVVLTFSETADTGDTGDTSDSGSSSGG
GGGGSSRSSSSSSSSIISSSDSSETPVTTSVPKTSSSGTSTDSSSNTVESSENVGPDTTQDSPDDTLDYGSDSNETGVVL
QQESPLGGINMYLALAAILLILIALAAAWYQSKEKPEVVPQQ
>Mature_682_residues
MKKIYTVLLVFALVSCLSIVSADSIPQFPHTFYGDVTINELPATGTLKVLVNGVESEQVQVTDGEFGKGLFDAKLVVNGA
SGDQITFSFESEGYTLDSDYKIYLIDSEQYVSEIDFVSGGYTEILLEFTGTGDGGDTGDTGDTGDTGDTGDTGDTGDTGD
TGDTGDTGDTGDTGDTGDTGDTGDTGDTGNGEELPLNPGVFYGLVYLDESLASSTLNLYVDGVLQDSIGIENGVFGGEGA
LDDKLIATGYDGNSNVVTFSLVSGGETYSSFTAELSDATYEDELPYIEGVHYVVLTFSETADTGNGEELPLNPDVFYGLV
YLDESLASSTLNLYVDGVLQDSIGIENGVFGGEGALDDKLIATGYDGNSNVVTFSLVSGGETYSSFTAELSDATYEDELP
YIEGVHYVVLTFSEIADTGDTGDSGDTGNINSSEQLPLNPDIFYGMVYLDEALASSTLNLYVDGALQNSIGIENGVFGGE
GPLDNKLIATGYDGNSNVVTFSLVSGGETYSSFTAELSDATYEDELPYIEGVHYVVLTFSETADTGDTGDTSDSGSSSGG
GGGGSSRSSSSSSSSIISSSDSSETPVTTSVPKTSSSGTSTDSSSNTVESSENVGPDTTQDSPDDTLDYGSDSNETGVVL
QQESPLGGINMYLALAAILLILIALAAAWYQSKEKPEVVPQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70799; Mature: 70799

Theoretical pI: Translated: 3.22; Mature: 3.22

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIYTVLLVFALVSCLSIVSADSIPQFPHTFYGDVTINELPATGTLKVLVNGVESEQVQ
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCEEEECCCCCCEEEEEEECCCCCEEE
VTDGEFGKGLFDAKLVVNGASGDQITFSFESEGYTLDSDYKIYLIDSEQYVSEIDFVSGG
EECCCCCCCEEEEEEEEECCCCCEEEEEECCCCEEECCCCEEEEECCHHHHHHHHHCCCC
YTEILLEFTGTGDGGDTGDTGDTGDTGDTGDTGDTGDTGDTGDTGDTGDTGDTGDTGDTG
CEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DTGDTGDTGNGEELPLNPGVFYGLVYLDESLASSTLNLYVDGVLQDSIGIENGVFGGEGA
CCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCC
LDDKLIATGYDGNSNVVTFSLVSGGETYSSFTAELSDATYEDELPYIEGVHYVVLTFSET
CCCCEEEECCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECC
ADTGNGEELPLNPDVFYGLVYLDESLASSTLNLYVDGVLQDSIGIENGVFGGEGALDDKL
CCCCCCCCCCCCCCCEEEEEEECHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCE
IATGYDGNSNVVTFSLVSGGETYSSFTAELSDATYEDELPYIEGVHYVVLTFSEIADTGD
EEECCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCHHCCCEEEEEEEHHHHCCCC
TGDSGDTGNINSSEQLPLNPDIFYGMVYLDEALASSTLNLYVDGALQNSIGIENGVFGGE
CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCEEEEEEECCHHCCCCCCCCCCCCC
GPLDNKLIATGYDGNSNVVTFSLVSGGETYSSFTAELSDATYEDELPYIEGVHYVVLTFS
CCCCCCEEEECCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEE
ETADTGDTGDTSDSGSSSGGGGGGSSRSSSSSSSSIISSSDSSETPVTTSVPKTSSSGTS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEECCCCCCCCCCC
TDSSSNTVESSENVGPDTTQDSPDDTLDYGSDSNETGVVLQQESPLGGINMYLALAAILL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
ILIALAAAWYQSKEKPEVVPQQ
HHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MKKIYTVLLVFALVSCLSIVSADSIPQFPHTFYGDVTINELPATGTLKVLVNGVESEQVQ
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCEEEECCCCCCEEEEEEECCCCCEEE
VTDGEFGKGLFDAKLVVNGASGDQITFSFESEGYTLDSDYKIYLIDSEQYVSEIDFVSGG
EECCCCCCCEEEEEEEEECCCCCEEEEEECCCCEEECCCCEEEEECCHHHHHHHHHCCCC
YTEILLEFTGTGDGGDTGDTGDTGDTGDTGDTGDTGDTGDTGDTGDTGDTGDTGDTGDTG
CEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DTGDTGDTGNGEELPLNPGVFYGLVYLDESLASSTLNLYVDGVLQDSIGIENGVFGGEGA
CCCCCCCCCCCCCCCCCCCCEEEEEEECHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCC
LDDKLIATGYDGNSNVVTFSLVSGGETYSSFTAELSDATYEDELPYIEGVHYVVLTFSET
CCCCEEEECCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECC
ADTGNGEELPLNPDVFYGLVYLDESLASSTLNLYVDGVLQDSIGIENGVFGGEGALDDKL
CCCCCCCCCCCCCCCEEEEEEECHHHHCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCE
IATGYDGNSNVVTFSLVSGGETYSSFTAELSDATYEDELPYIEGVHYVVLTFSEIADTGD
EEECCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCHHCCCEEEEEEEHHHHCCCC
TGDSGDTGNINSSEQLPLNPDIFYGMVYLDEALASSTLNLYVDGALQNSIGIENGVFGGE
CCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHHHCCEEEEEEECCHHCCCCCCCCCCCCC
GPLDNKLIATGYDGNSNVVTFSLVSGGETYSSFTAELSDATYEDELPYIEGVHYVVLTFS
CCCCCCEEEECCCCCCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEE
ETADTGDTGDTSDSGSSSGGGGGGSSRSSSSSSSSIISSSDSSETPVTTSVPKTSSSGTS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEECCCCCCCCCCC
TDSSSNTVESSENVGPDTTQDSPDDTLDYGSDSNETGVVLQQESPLGGINMYLALAAILL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
ILIALAAAWYQSKEKPEVVPQQ
HHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA