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The map label for this gene is 45358755

Identifier: 45358755

GI number: 45358755

Start: 1174250

End: 1175365

Strand: Direct

Name: 45358755

Synonym: MMP1192

Alternate gene names: NA

Gene position: 1174250-1175365 (Clockwise)

Preceding gene: 45358754

Following gene: 45358756

Centisome position: 70.69

GC content: 29.21

Gene sequence:

>1116_bases
ATGGATTTATCAAATTTAAATGAAAAAGATATGGCTCTGGGCTGTAAATACTGCATAAAGGGAGAAAAACTGGTGTTATA
TATCACAGGACTCTGTGAAGAATCCTGCTACTACTGCCCGCTTTCAGAAAAAAGGAAAAAAAAGGATGTAATTTTTGCAA
ATGAAAAGCAGATTAATTCAATTGAAGAAGCAGTTGAAGAAGCACGTCTTTGTGGAAGTAAAGGTGTAGGAATAACTGGT
GGAAATCCGCTTTTAAGAATTGAAAGAACTGTTGAATATTTAAAAGCTTTAAAGGAAGAATTTGGAAGTGATTTCCACGC
ACATCTCTACACAACACCAAAATTTGTTAGTGAAAAAAATTTAAAACTTTTAAAAGATGCAGGCCTTGATGAAATCAGAC
TTCATTCTTCAAAATTATTCAATGATTTTGAAAATTTCGATAAACTGGACTTTTTAGAAAAATTGAAACTCTGTAAAAAC
TACATTAAAGATGTTGGAGTTGAAATTCCTGGAATTCCAAATTTTGAAAAAGAAATTTTAGATCTAGCTTTTGAAATTGA
TAAAATCGGCGTAAAATTCTTAAATATCAATGAACTTGAGTATTCTGAAACCAACTACCAATCTTTAATTGATAGAGGAT
TTTCTGAAAAAGATGATACAACATCCAGAATTTCGGGAAGCTTTGAAACTGCAAAATATATAATCGATAATTTTAAAGGA
AAATTGATAATTCATTTCTGCCCTTCTTCATTAAAAGACAGTGTTCAGATGAAAAACCGGCTTATAAATCGTGCGAGAAA
CGTTGCAAAGCCTTATGAAGAAATTACAGAAGAAGGCCTTTTATTAAAAGGAACTATTAATTTTAAGGATTTAAAGGACG
TTTCAGAAGTACTTGAAGTATTAAAAGAAAATGACGTAGAATTTGAGCTGTTAAATGACAGATTATTATTAAATCCAGAA
ATTTTAGAAGATTTAATAGATCATTTAAAAGAAAACAACTTTGATTTTAAATTCAGTGCATATATATCTGAATATTACCC
AACATCTGATAAATTAGAAGTTGAAAGAATCCCACTTGTTACAAAAAAGCCTAATTTAAAATTAAAGAAAAAATAA

Upstream 100 bases:

>100_bases
ATAAATATAAATACTAAATTTTAATATCTATTTTTTAAAATATATTTCGTGTTTTGTCAGAATTTACAAAATTAAAATTA
CCGTTTTTTAAGGTGCTTTT

Downstream 100 bases:

>100_bases
GCATTTATTAATTTAATAAAAATTAATTAATAGATTATTATTTAAAAAACCCGAATTTATTTGATTTTACTTAATTTTTT
CGAAAAAATTTTGGTTTTCA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MDLSNLNEKDMALGCKYCIKGEKLVLYITGLCEESCYYCPLSEKRKKKDVIFANEKQINSIEEAVEEARLCGSKGVGITG
GNPLLRIERTVEYLKALKEEFGSDFHAHLYTTPKFVSEKNLKLLKDAGLDEIRLHSSKLFNDFENFDKLDFLEKLKLCKN
YIKDVGVEIPGIPNFEKEILDLAFEIDKIGVKFLNINELEYSETNYQSLIDRGFSEKDDTTSRISGSFETAKYIIDNFKG
KLIIHFCPSSLKDSVQMKNRLINRARNVAKPYEEITEEGLLLKGTINFKDLKDVSEVLEVLKENDVEFELLNDRLLLNPE
ILEDLIDHLKENNFDFKFSAYISEYYPTSDKLEVERIPLVTKKPNLKLKKK

Sequences:

>Translated_371_residues
MDLSNLNEKDMALGCKYCIKGEKLVLYITGLCEESCYYCPLSEKRKKKDVIFANEKQINSIEEAVEEARLCGSKGVGITG
GNPLLRIERTVEYLKALKEEFGSDFHAHLYTTPKFVSEKNLKLLKDAGLDEIRLHSSKLFNDFENFDKLDFLEKLKLCKN
YIKDVGVEIPGIPNFEKEILDLAFEIDKIGVKFLNINELEYSETNYQSLIDRGFSEKDDTTSRISGSFETAKYIIDNFKG
KLIIHFCPSSLKDSVQMKNRLINRARNVAKPYEEITEEGLLLKGTINFKDLKDVSEVLEVLKENDVEFELLNDRLLLNPE
ILEDLIDHLKENNFDFKFSAYISEYYPTSDKLEVERIPLVTKKPNLKLKKK
>Mature_371_residues
MDLSNLNEKDMALGCKYCIKGEKLVLYITGLCEESCYYCPLSEKRKKKDVIFANEKQINSIEEAVEEARLCGSKGVGITG
GNPLLRIERTVEYLKALKEEFGSDFHAHLYTTPKFVSEKNLKLLKDAGLDEIRLHSSKLFNDFENFDKLDFLEKLKLCKN
YIKDVGVEIPGIPNFEKEILDLAFEIDKIGVKFLNINELEYSETNYQSLIDRGFSEKDDTTSRISGSFETAKYIIDNFKG
KLIIHFCPSSLKDSVQMKNRLINRARNVAKPYEEITEEGLLLKGTINFKDLKDVSEVLEVLKENDVEFELLNDRLLLNPE
ILEDLIDHLKENNFDFKFSAYISEYYPTSDKLEVERIPLVTKKPNLKLKKK

Specific function: Unknown

COG id: COG2108

COG function: function code R; Uncharacterized conserved protein related to pyruvate formate-lyase activating enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the organic radical-activating enzymes family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR006638
- InterPro:   IPR001989
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 42793; Mature: 42793

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLSNLNEKDMALGCKYCIKGEKLVLYITGLCEESCYYCPLSEKRKKKDVIFANEKQINS
CCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCEECCCCHHHCCCCEEEECHHHHHH
IEEAVEEARLCGSKGVGITGGNPLLRIERTVEYLKALKEEFGSDFHAHLYTTPKFVSEKN
HHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCEEEEEECCCHHHCCCC
LKLLKDAGLDEIRLHSSKLFNDFENFDKLDFLEKLKLCKNYIKDVGVEIPGIPNFEKEIL
HHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
DLAFEIDKIGVKFLNINELEYSETNYQSLIDRGFSEKDDTTSRISGSFETAKYIIDNFKG
HHHHHHHHHCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHCCCC
KLIIHFCPSSLKDSVQMKNRLINRARNVAKPYEEITEEGLLLKGTINFKDLKDVSEVLEV
CEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEECCCHHHHHHHHHHHHH
LKENDVEFELLNDRLLLNPEILEDLIDHLKENNFDFKFSAYISEYYPTSDKLEVERIPLV
HHHCCCEEEEECCEEEECHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCEEEEECCEE
TKKPNLKLKKK
ECCCCCCCCCC
>Mature Secondary Structure
MDLSNLNEKDMALGCKYCIKGEKLVLYITGLCEESCYYCPLSEKRKKKDVIFANEKQINS
CCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCEECCCCHHHCCCCEEEECHHHHHH
IEEAVEEARLCGSKGVGITGGNPLLRIERTVEYLKALKEEFGSDFHAHLYTTPKFVSEKN
HHHHHHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHCCCEEEEEECCCHHHCCCC
LKLLKDAGLDEIRLHSSKLFNDFENFDKLDFLEKLKLCKNYIKDVGVEIPGIPNFEKEIL
HHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
DLAFEIDKIGVKFLNINELEYSETNYQSLIDRGFSEKDDTTSRISGSFETAKYIIDNFKG
HHHHHHHHHCEEEEEECCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCHHHHHHHHHCCCC
KLIIHFCPSSLKDSVQMKNRLINRARNVAKPYEEITEEGLLLKGTINFKDLKDVSEVLEV
CEEEEECCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCEEEEECCCHHHHHHHHHHHHH
LKENDVEFELLNDRLLLNPEILEDLIDHLKENNFDFKFSAYISEYYPTSDKLEVERIPLV
HHHCCCEEEEECCEEEECHHHHHHHHHHHHCCCCCEEEEEHHHHHCCCCCCEEEEECCEE
TKKPNLKLKKK
ECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]