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The map label for this gene is rbo

Identifier: 45358720

GI number: 45358720

Start: 1144654

End: 1145010

Strand: Direct

Name: rbo

Synonym: MMP1157

Alternate gene names: NA

Gene position: 1144654-1145010 (Clockwise)

Preceding gene: 45358719

Following gene: 45358721

Centisome position: 68.91

GC content: 35.29

Gene sequence:

>357_bases
ATGAGCTGTGTAAGTGCTCAAACACTTAAAGAAGGAACTGATTTTGAAAAAAAACACGTTCCAATGATAGAATGTAAAAA
TTCAGTTAAACCCGATGAAATCTACGAAGTAAAAATTCATACTGCAGGAGTAGAACATCCAATGGAAGACGGACACTTCA
TCCAGTTTATTGAACTAAATGTAGAAGAGTACCCTCTTTTAAGAGTTCAGCTAACACAGCACTCCAAACCCGATGTTGTG
GTAAATATAAAAGCTCCAAATGAAGAACATAAAGGTCGAACGATTAAACTCGTTGCGACAATGTTTTGCAACCTTCATGG
GCTTTGGAAATACGAAAAAGAAGTAATAATTGAATAA

Upstream 100 bases:

>100_bases
GAAATAGTTGATGCATTGCGGGTTGTATTATTAACTTCAGGAATGCCTGCATTTACAAAAGCTATGAAAGTAGTTAGCAA
ATTATAAATGGGGAGATATA

Downstream 100 bases:

>100_bases
AAACCAAATTTGGTGAGTTAATGATTACTACAAACCATCCTCTTGGCGAAGCGCTAAAAGATATTGAAAATTTCAAATTA
GCATTGGCTGATTACTTTAA

Product: desulfoferrodoxin, ferrous iron-binding site

Products: NA

Alternate protein names: SOR [H]

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MSCVSAQTLKEGTDFEKKHVPMIECKNSVKPDEIYEVKIHTAGVEHPMEDGHFIQFIELNVEEYPLLRVQLTQHSKPDVV
VNIKAPNEEHKGRTIKLVATMFCNLHGLWKYEKEVIIE

Sequences:

>Translated_118_residues
MSCVSAQTLKEGTDFEKKHVPMIECKNSVKPDEIYEVKIHTAGVEHPMEDGHFIQFIELNVEEYPLLRVQLTQHSKPDVV
VNIKAPNEEHKGRTIKLVATMFCNLHGLWKYEKEVIIE
>Mature_117_residues
SCVSAQTLKEGTDFEKKHVPMIECKNSVKPDEIYEVKIHTAGVEHPMEDGHFIQFIELNVEEYPLLRVQLTQHSKPDVVV
NIKAPNEEHKGRTIKLVATMFCNLHGLWKYEKEVIIE

Specific function: Uses electrons from reduced NADP, by way of rubredoxin and an oxidoreductase, to catalyze the reduction of superoxide to hydrogen peroxide [H]

COG id: COG2033

COG function: function code C; Desulfoferrodoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the desulfoferrodoxin family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002742 [H]

Pfam domain/function: PF01880 Desulfoferrodox [H]

EC number: =1.15.1.2 [H]

Molecular weight: Translated: 13628; Mature: 13497

Theoretical pI: Translated: 6.14; Mature: 6.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCVSAQTLKEGTDFEKKHVPMIECKNSVKPDEIYEVKIHTAGVEHPMEDGHFIQFIELN
CCCCCCCHHHCCCCCCHHCCCCEEECCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEC
VEEYPLLRVQLTQHSKPDVVVNIKAPNEEHKGRTIKLVATMFCNLHGLWKYEKEVIIE
CCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEHHHHCCCCCEEECEEEECC
>Mature Secondary Structure 
SCVSAQTLKEGTDFEKKHVPMIECKNSVKPDEIYEVKIHTAGVEHPMEDGHFIQFIELN
CCCCCCHHHCCCCCCHHCCCCEEECCCCCCCEEEEEEEEECCCCCCCCCCCEEEEEEEC
VEEYPLLRVQLTQHSKPDVVVNIKAPNEEHKGRTIKLVATMFCNLHGLWKYEKEVIIE
CCCCCEEEEEECCCCCCCEEEEEECCCCCCCCCEEEEEEHHHHCCCCCEEECEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]