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The map label for this gene is 45358680

Identifier: 45358680

GI number: 45358680

Start: 1107188

End: 1107676

Strand: Direct

Name: 45358680

Synonym: MMP1117

Alternate gene names: NA

Gene position: 1107188-1107676 (Clockwise)

Preceding gene: 45358679

Following gene: 45358682

Centisome position: 66.65

GC content: 30.67

Gene sequence:

>489_bases
ATGAAACTTGATATTAAAAAAGACTTAAAAAACATTGCATGGCACTGTACAATGTGCGGTGGATGCTGTGACTCACCAAG
CGTTTCCAAAAAAGATGTTGCAAATATTGCAGGATTTCTAAAAATTCCATTTGACGAAGTTGTTAAAAAATACCTCGTAA
ACTTTGATGGAATGACGGGAAGGCTTAAAACCTCAAAAGAAAAGTGTATATTCTTAGATGAAAATAATAAATGTAAAATT
TATAGAGTTAGGCCAATTATCTGTAGATTAAGACCATATTCTGTTCAAATTAAAGATCAAAACCTTGTTTTAACATACGA
TGGCTGGTTTTTGGAAAACTGTAAAGGTCTGTTTATGGGGGATTTAGACCCTGATGAAGAATATTATAAACACGCAGAAA
CCGTTTTAAAATACCTTGGAGAAGAAGAAAATACTCCTGAAGAATTTTTTGAAAAAGCTAAAAAAAGATTGAAAAAATCT
AAAAAATAA

Upstream 100 bases:

>100_bases
AAAAGTACATGAATACTTTTAATTTTAATTAACCCTATTTTTTAATTTTTAGGATATTAAAAAAATTTAAAAATTTAAAT
CAAAAGAAAACGTGAATTTT

Downstream 100 bases:

>100_bases
TAATTTAGCAGAACGTTCTGTTTGAAACAGGGATGCAAAGTGTCTTTTTACAGTGTGGACACTCAACTGTTACTTTATCC
AGTTCATAATTTTCTGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MKLDIKKDLKNIAWHCTMCGGCCDSPSVSKKDVANIAGFLKIPFDEVVKKYLVNFDGMTGRLKTSKEKCIFLDENNKCKI
YRVRPIICRLRPYSVQIKDQNLVLTYDGWFLENCKGLFMGDLDPDEEYYKHAETVLKYLGEEENTPEEFFEKAKKRLKKS
KK

Sequences:

>Translated_162_residues
MKLDIKKDLKNIAWHCTMCGGCCDSPSVSKKDVANIAGFLKIPFDEVVKKYLVNFDGMTGRLKTSKEKCIFLDENNKCKI
YRVRPIICRLRPYSVQIKDQNLVLTYDGWFLENCKGLFMGDLDPDEEYYKHAETVLKYLGEEENTPEEFFEKAKKRLKKS
KK
>Mature_162_residues
MKLDIKKDLKNIAWHCTMCGGCCDSPSVSKKDVANIAGFLKIPFDEVVKKYLVNFDGMTGRLKTSKEKCIFLDENNKCKI
YRVRPIICRLRPYSVQIKDQNLVLTYDGWFLENCKGLFMGDLDPDEEYYKHAETVLKYLGEEENTPEEFFEKAKKRLKKS
KK

Specific function: Unknown

COG id: COG0727

COG function: function code R; Predicted Fe-S-cluster oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To H.pylori HP0274 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005358 [H]

Pfam domain/function: PF03692 UPF0153 [H]

EC number: NA

Molecular weight: Translated: 18893; Mature: 18893

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDIKKDLKNIAWHCTMCGGCCDSPSVSKKDVANIAGFLKIPFDEVVKKYLVNFDGMTG
CCCCHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHEECCHHHHHHHHHHCCCCCCC
RLKTSKEKCIFLDENNKCKIYRVRPIICRLRPYSVQIKDQNLVLTYDGWFLENCKGLFMG
CEECCCCCEEEEECCCCEEEEEECEEEEEECCCEEEEECCEEEEEECCEEECCCCEEEEC
DLDPDEEYYKHAETVLKYLGEEENTPEEFFEKAKKRLKKSKK
CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLDIKKDLKNIAWHCTMCGGCCDSPSVSKKDVANIAGFLKIPFDEVVKKYLVNFDGMTG
CCCCHHHHHHHHHEEEEECCCCCCCCCCCHHHHHHHHHHEECCHHHHHHHHHHCCCCCCC
RLKTSKEKCIFLDENNKCKIYRVRPIICRLRPYSVQIKDQNLVLTYDGWFLENCKGLFMG
CEECCCCCEEEEECCCCEEEEEECEEEEEECCCEEEEECCEEEEEECCEEECCCCEEEEC
DLDPDEEYYKHAETVLKYLGEEENTPEEFFEKAKKRLKKSKK
CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]