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The map label for this gene is 45358618

Identifier: 45358618

GI number: 45358618

Start: 1046236

End: 1046541

Strand: Direct

Name: 45358618

Synonym: MMP1055

Alternate gene names: NA

Gene position: 1046236-1046541 (Clockwise)

Preceding gene: 45358615

Following gene: 45358619

Centisome position: 62.98

GC content: 26.47

Gene sequence:

>306_bases
TTGATTGAGAAAATGGTCAAAGAATCAGAAAAAGGAATTTTAATTGATATCGAAGTTACTACAAACGCTAAAAAAAATGA
AATTGGAAAAATTAACGAATGGCGTAAAAGAATAGAAATAAGAATTAAAGAACAGCCTATCGAAGGCAAAGCAAACAAGG
CAATTATAAAATTTTTAAAGGGCATTTTTAAAAGTGAAATACTGATAAATTCGGGAACAACCTCATCACAAAAAACAGTA
CTTATACCAGATAAAACAAAAGATGATGTTGTAACAATTTTAAAAAAGGAAATTAAATCAATTTAA

Upstream 100 bases:

>100_bases
TATAATATATTTATTAGTAATCGATATCCTATATTATACTCGTGTATAATACCTTAGTATTTTTAATAGAAATTCGAATA
TTATTTAAGATGGTGGTATT

Downstream 100 bases:

>100_bases
TCTTACCAATTAAAGTGATAGCATGGAAGACGACATTAATTACACCCTTGCAGCGTATAGGATCTGCACTCCTGAAGAAA
CTTTTGAAAAAATAGAACCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 101

Protein sequence:

>101_residues
MIEKMVKESEKGILIDIEVTTNAKKNEIGKINEWRKRIEIRIKEQPIEGKANKAIIKFLKGIFKSEILINSGTTSSQKTV
LIPDKTKDDVVTILKKEIKSI

Sequences:

>Translated_101_residues
MIEKMVKESEKGILIDIEVTTNAKKNEIGKINEWRKRIEIRIKEQPIEGKANKAIIKFLKGIFKSEILINSGTTSSQKTV
LIPDKTKDDVVTILKKEIKSI
>Mature_101_residues
MIEKMVKESEKGILIDIEVTTNAKKNEIGKINEWRKRIEIRIKEQPIEGKANKAIIKFLKGIFKSEILINSGTTSSQKTV
LIPDKTKDDVVTILKKEIKSI

Specific function: Unknown

COG id: COG1872

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0235 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y1055_METMP (Q6LYD6)

Other databases:

- EMBL:   BX950229
- RefSeq:   NP_988175.1
- HSSP:   O26734
- ProteinModelPortal:   Q6LYD6
- SMR:   Q6LYD6
- GeneID:   2762782
- GenomeReviews:   BX950229_GR
- KEGG:   mmp:MMP1055
- NMPDR:   fig|267377.1.peg.1055
- HOGENOM:   HBG472132
- OMA:   AKKNEIG
- ProtClustDB:   CLSK876267
- BioCyc:   MMAR267377:MMP1055-MONOMER
- HAMAP:   MF_00634
- InterPro:   IPR005228
- InterPro:   IPR003746
- Gene3D:   G3DSA:3.30.1200.10
- TIGRFAMs:   TIGR00251

Pfam domain/function: PF02594 DUF167; SSF69786 DUF167

EC number: NA

Molecular weight: Translated: 11507; Mature: 11507

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEKMVKESEKGILIDIEVTTNAKKNEIGKINEWRKRIEIRIKEQPIEGKANKAIIKFLK
CCHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHEEEEECCCCCCCCHHHHHHHHH
GIFKSEILINSGTTSSQKTVLIPDKTKDDVVTILKKEIKSI
HHHHHCEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIEKMVKESEKGILIDIEVTTNAKKNEIGKINEWRKRIEIRIKEQPIEGKANKAIIKFLK
CCHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHEEEEECCCCCCCCHHHHHHHHH
GIFKSEILINSGTTSSQKTVLIPDKTKDDVVTILKKEIKSI
HHHHHCEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA