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The map label for this gene is atpC [H]

Identifier: 45358605

GI number: 45358605

Start: 1035217

End: 1036392

Strand: Direct

Name: atpC [H]

Synonym: MMP1042

Alternate gene names: 45358605

Gene position: 1035217-1036392 (Clockwise)

Preceding gene: 45358604

Following gene: 45358606

Centisome position: 62.32

GC content: 34.52

Gene sequence:

>1176_bases
ATGGTAGATGCTTTAACACAGTTAATGGAATTAGCAGGAATGCCTACTGACATATTCATGACTTTATTTGTACTTGCAGG
AATCGCTATATTCTTGGTTATTATGATCTTCCTGATAAGATACTTGTCAGAAACTGCTCCATTTGCTTACGTTAATGCAA
GAGTAAGAAGTATGGAGTCCAGGTTATTGAAAGACCATAAAATAAATGAATTAATCGAATCTGCAGGAACTACAGAGTTA
ATTGGATTCTTGGAAGATACGGACTACGGGCCATACTTATCCGAAGTTTTAGGACAAAGTGAAGACCCAGTAGTTGTTGA
AAAGGCATTGGATATTCATTTAGCACACGTTTACCAAACACTTGCAAATATCTCCCCTGATGGAGCAAGGAAAATATTAA
AATTGCTTGAAAAGAAATTCGATGTTAAAAACATCAAAACACTTCTTAGAGCAAAATATGTTGGTTTGGATGCTGAAGAA
ACTTTCAAATTATTGATTCCACTTGGAACAATTCCTGAAAGCAAATTAAGAGAATTAAGTGAAACTAAAGAAATTGAAGA
AATCGTAAGTGCTTTAGATGGAACTGGTTATTCAGGCGTACTTTCAGAAGGTTTGACAGAATACGAGCAAAACGGCAAAT
TAACTACCCTTGAAATGTCACTCGATAAATTAATCCTTGAAAACCTCTGGAAAAACGTAAGTGTTGATGGTACCGAAAAA
GACTTGTTCAAAGAATTTATCGGAACAATGATTGACATTGAAAACTTGAAAATCATCCTCAAAGCAAAAGCTGACGGATT
ATCATCTGAAGTTATTTCAAAATATACAACAAGCAAAGGATACGAACTTGCTTCTTGGAAATTAAAAGAGCTTGCTGATG
TAGAATCAATCGAAGGAGTTATCAGTTCACTTGACGGTACAAAATATGCACCGATTGTAACTGAAAACCTCGAAGAATTC
GAAAAAGTTAAGTCAGTTTATGTATTTGAAAAAGCTCTTGACAGTTACCTAGTTCAAATGGGTAAAAAATTATCACTCAG
ACAGCCATTTGGAATAGGCCCGATAATTGGACTTATTACCTCAAAAGAACTTGAGATAAGAAATTTGAAAATTATCATTA
AAGGTAAAATTGAAGGCCTGTCTGCAAGTGAAATCAGGGAGATACTGGTATCTTAA

Upstream 100 bases:

>100_bases
CAAACAAAAGTATCTGACAACAGCCTCGAAGCAACATTTGAAAGGAATTTAGATTCAGTCAGAGCTAAAATTGCTGAAAT
GTTGTTCTAAGGTGATTTAG

Downstream 100 bases:

>100_bases
AAACGATTATAAAGTGATATTATGAGAATCGGTGTAGTTGGAGATCCTGATGTAGTAGCTGGGTTCAGACTTGCTGGACT
TACAGATGTCTACGAAGTTA

Product: V-type ATP synthase subunit C

Products: ADP; phosphate; H+

Alternate protein names: V-ATPase subunit C [H]

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MVDALTQLMELAGMPTDIFMTLFVLAGIAIFLVIMIFLIRYLSETAPFAYVNARVRSMESRLLKDHKINELIESAGTTEL
IGFLEDTDYGPYLSEVLGQSEDPVVVEKALDIHLAHVYQTLANISPDGARKILKLLEKKFDVKNIKTLLRAKYVGLDAEE
TFKLLIPLGTIPESKLRELSETKEIEEIVSALDGTGYSGVLSEGLTEYEQNGKLTTLEMSLDKLILENLWKNVSVDGTEK
DLFKEFIGTMIDIENLKIILKAKADGLSSEVISKYTTSKGYELASWKLKELADVESIEGVISSLDGTKYAPIVTENLEEF
EKVKSVYVFEKALDSYLVQMGKKLSLRQPFGIGPIIGLITSKELEIRNLKIIIKGKIEGLSASEIREILVS

Sequences:

>Translated_391_residues
MVDALTQLMELAGMPTDIFMTLFVLAGIAIFLVIMIFLIRYLSETAPFAYVNARVRSMESRLLKDHKINELIESAGTTEL
IGFLEDTDYGPYLSEVLGQSEDPVVVEKALDIHLAHVYQTLANISPDGARKILKLLEKKFDVKNIKTLLRAKYVGLDAEE
TFKLLIPLGTIPESKLRELSETKEIEEIVSALDGTGYSGVLSEGLTEYEQNGKLTTLEMSLDKLILENLWKNVSVDGTEK
DLFKEFIGTMIDIENLKIILKAKADGLSSEVISKYTTSKGYELASWKLKELADVESIEGVISSLDGTKYAPIVTENLEEF
EKVKSVYVFEKALDSYLVQMGKKLSLRQPFGIGPIIGLITSKELEIRNLKIIIKGKIEGLSASEIREILVS
>Mature_391_residues
MVDALTQLMELAGMPTDIFMTLFVLAGIAIFLVIMIFLIRYLSETAPFAYVNARVRSMESRLLKDHKINELIESAGTTEL
IGFLEDTDYGPYLSEVLGQSEDPVVVEKALDIHLAHVYQTLANISPDGARKILKLLEKKFDVKNIKTLLRAKYVGLDAEE
TFKLLIPLGTIPESKLRELSETKEIEEIVSALDGTGYSGVLSEGLTEYEQNGKLTTLEMSLDKLILENLWKNVSVDGTEK
DLFKEFIGTMIDIENLKIILKAKADGLSSEVISKYTTSKGYELASWKLKELADVESIEGVISSLDGTKYAPIVTENLEEF
EKVKSVYVFEKALDSYLVQMGKKLSLRQPFGIGPIIGLITSKELEIRNLKIIIKGKIEGLSASEIREILVS

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]

COG id: COG1527

COG function: function code C; Archaeal/vacuolar-type H+-ATPase subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the V-ATPase V0D/AC39 subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014272
- InterPro:   IPR002843 [H]

Pfam domain/function: PF01992 vATP-synt_AC39 [H]

EC number: 3.6.3.14

Molecular weight: Translated: 43569; Mature: 43569

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVDALTQLMELAGMPTDIFMTLFVLAGIAIFLVIMIFLIRYLSETAPFAYVNARVRSMES
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RLLKDHKINELIESAGTTELIGFLEDTDYGPYLSEVLGQSEDPVVVEKALDIHLAHVYQT
HHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LANISPDGARKILKLLEKKFDVKNIKTLLRAKYVGLDAEETFKLLIPLGTIPESKLRELS
HHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHEEECCCCCHHHHHHHH
ETKEIEEIVSALDGTGYSGVLSEGLTEYEQNGKLTTLEMSLDKLILENLWKNVSVDGTEK
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCHH
DLFKEFIGTMIDIENLKIILKAKADGLSSEVISKYTTSKGYELASWKLKELADVESIEGV
HHHHHHHHHHEECCCCEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
ISSLDGTKYAPIVTENLEEFEKVKSVYVFEKALDSYLVQMGKKLSLRQPFGIGPIIGLIT
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHC
SKELEIRNLKIIIKGKIEGLSASEIREILVS
CCCEEEEEEEEEEEECCCCCCHHHHHHHHCC
>Mature Secondary Structure
MVDALTQLMELAGMPTDIFMTLFVLAGIAIFLVIMIFLIRYLSETAPFAYVNARVRSMES
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
RLLKDHKINELIESAGTTELIGFLEDTDYGPYLSEVLGQSEDPVVVEKALDIHLAHVYQT
HHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH
LANISPDGARKILKLLEKKFDVKNIKTLLRAKYVGLDAEETFKLLIPLGTIPESKLRELS
HHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHEEECCCCCHHHHHHHH
ETKEIEEIVSALDGTGYSGVLSEGLTEYEQNGKLTTLEMSLDKLILENLWKNVSVDGTEK
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCHH
DLFKEFIGTMIDIENLKIILKAKADGLSSEVISKYTTSKGYELASWKLKELADVESIEGV
HHHHHHHHHHEECCCCEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
ISSLDGTKYAPIVTENLEEFEKVKSVYVFEKALDSYLVQMGKKLSLRQPFGIGPIIGLIT
HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHC
SKELEIRNLKIIIKGKIEGLSASEIREILVS
CCCEEEEEEEEEEEECCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]