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The map label for this gene is 45358577

Identifier: 45358577

GI number: 45358577

Start: 1001423

End: 1002490

Strand: Direct

Name: 45358577

Synonym: MMP1014

Alternate gene names: NA

Gene position: 1001423-1002490 (Clockwise)

Preceding gene: 45358576

Following gene: 45358578

Centisome position: 60.29

GC content: 33.43

Gene sequence:

>1068_bases
ATGTCTATGGCTGATTATTTAAAAAATATCCGTGAAAAACATCTTAAAAAACGAAAAGAAAGAAATCCCGATTATCCGAT
TGCAGTTTGGATTCAAAACGATGTTTTTCGCGATAAAACGTTTGGACAAAGCTTTACAATAATTTTAAGAACAAAGGGCT
GTAAATGGGCATACGATAGCGGAGGGTGCACGATGTGCAGCTACCTAATGGACGCATCCCCTGCCGAAATTACTTCTGAA
AACTTAAAAAACCAGTTCGATTCTGCAGTTGAAAAATATAAAGATCAACTCAATAAAAATATGTCAATAAAACTCTTCAC
TTCAGGCAGTTTTTTGGATACTTTTGAAATCCCGCTTGAAACAAGAGAATACATCTTTAAAAGAATCGAAGAAATGGGTG
CAAAAGAAGTTGCAATTGAATCGAGAGCTGAATTTGTAACTCCTGAAAACATGGAATCGATAAAAAATATTCTTTCCTGC
AACATTGAAATTGGTGTTGGAATCGAAAGTTTAAATGAAAAAATAAGAAATGTTGCAATCCACAAAGGAGTTCCAACAAA
AGCAATTGAAAACGCATTTTCCGTTGCAGAAGAATATGATGTAGGGATAAAAGCCTATATTTTGATAAAACCGCCATTTA
TTTCAGAAAAAGAAGCAATCGCTGATGCGATAGATACTGCAAACAAATGTATAGAAATGGGCTGCAGTAGAATTTCTTTC
TGTCCTGCATCAATTCACAAAGGAACTTTAATTGAAACACTCTGGAAAAAAAATCAGTACAGACCGCCATTTTTATGGAG
TATTTTAGAAATTTTAAAAGAAGTAAAATCTAAAAATCCTGATGCTCTGGTAATGTGCGATACTGCAGGGGTTTCTTCAA
AAAGAGGAGCGCATAATAATATTGACTGCACCTGCAACGATAAAATAAAAGATATATTTAATGACTTTACAGTTACTCAA
AAAATTGAAAAACTTGATATCGAATGCGACTGTAAAAAAGAGTGGATTGAGTACATGGAATACGAACAGAAAAATATTGT
ACCGCTTGGAGATGAAAAATTAATTTAA

Upstream 100 bases:

>100_bases
CTTGGAGTTTATTCACTAAATGAACTTGAAAATTAATTAAACCCCGATTATTTTATTTTAAATTTTTTATTAACTTATTT
TCTTATTTTGAGGAGATATT

Downstream 100 bases:

>100_bases
TTTATTTTTTTTAAATATTCTTTTGTGTTATTTTCCCATTTTTGATTTGCTGTTTTATATAAGGTTTAAATAATTTAAAT
GCCATATGATTCTAAAGATA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 354

Protein sequence:

>355_residues
MSMADYLKNIREKHLKKRKERNPDYPIAVWIQNDVFRDKTFGQSFTIILRTKGCKWAYDSGGCTMCSYLMDASPAEITSE
NLKNQFDSAVEKYKDQLNKNMSIKLFTSGSFLDTFEIPLETREYIFKRIEEMGAKEVAIESRAEFVTPENMESIKNILSC
NIEIGVGIESLNEKIRNVAIHKGVPTKAIENAFSVAEEYDVGIKAYILIKPPFISEKEAIADAIDTANKCIEMGCSRISF
CPASIHKGTLIETLWKKNQYRPPFLWSILEILKEVKSKNPDALVMCDTAGVSSKRGAHNNIDCTCNDKIKDIFNDFTVTQ
KIEKLDIECDCKKEWIEYMEYEQKNIVPLGDEKLI

Sequences:

>Translated_355_residues
MSMADYLKNIREKHLKKRKERNPDYPIAVWIQNDVFRDKTFGQSFTIILRTKGCKWAYDSGGCTMCSYLMDASPAEITSE
NLKNQFDSAVEKYKDQLNKNMSIKLFTSGSFLDTFEIPLETREYIFKRIEEMGAKEVAIESRAEFVTPENMESIKNILSC
NIEIGVGIESLNEKIRNVAIHKGVPTKAIENAFSVAEEYDVGIKAYILIKPPFISEKEAIADAIDTANKCIEMGCSRISF
CPASIHKGTLIETLWKKNQYRPPFLWSILEILKEVKSKNPDALVMCDTAGVSSKRGAHNNIDCTCNDKIKDIFNDFTVTQ
KIEKLDIECDCKKEWIEYMEYEQKNIVPLGDEKLI
>Mature_354_residues
SMADYLKNIREKHLKKRKERNPDYPIAVWIQNDVFRDKTFGQSFTIILRTKGCKWAYDSGGCTMCSYLMDASPAEITSEN
LKNQFDSAVEKYKDQLNKNMSIKLFTSGSFLDTFEIPLETREYIFKRIEEMGAKEVAIESRAEFVTPENMESIKNILSCN
IEIGVGIESLNEKIRNVAIHKGVPTKAIENAFSVAEEYDVGIKAYILIKPPFISEKEAIADAIDTANKCIEMGCSRISFC
PASIHKGTLIETLWKKNQYRPPFLWSILEILKEVKSKNPDALVMCDTAGVSSKRGAHNNIDCTCNDKIKDIFNDFTVTQK
IEKLDIECDCKKEWIEYMEYEQKNIVPLGDEKLI

Specific function: Unknown

COG id: COG1244

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005909
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 40575; Mature: 40444

Theoretical pI: Translated: 5.60; Mature: 5.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMADYLKNIREKHLKKRKERNPDYPIAVWIQNDVFRDKTFGQSFTIILRTKGCKWAYDS
CCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCEEECC
GGCTMCSYLMDASPAEITSENLKNQFDSAVEKYKDQLNKNMSIKLFTSGSFLDTFEIPLE
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCHH
TREYIFKRIEEMGAKEVAIESRAEFVTPENMESIKNILSCNIEIGVGIESLNEKIRNVAI
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCHHHHHHHHHHHHH
HKGVPTKAIENAFSVAEEYDVGIKAYILIKPPFISEKEAIADAIDTANKCIEMGCSRISF
CCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHCC
CPASIHKGTLIETLWKKNQYRPPFLWSILEILKEVKSKNPDALVMCDTAGVSSKRGAHNN
CCHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
IDCTCNDKIKDIFNDFTVTQKIEKLDIECDCKKEWIEYMEYEQKNIVPLGDEKLI
CCEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SMADYLKNIREKHLKKRKERNPDYPIAVWIQNDVFRDKTFGQSFTIILRTKGCKWAYDS
CHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCEEEEEEEECCCCEEECC
GGCTMCSYLMDASPAEITSENLKNQFDSAVEKYKDQLNKNMSIKLFTSGSFLDTFEIPLE
CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEEECCHH
TREYIFKRIEEMGAKEVAIESRAEFVTPENMESIKNILSCNIEIGVGIESLNEKIRNVAI
HHHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCHHHHHHHHHHHHH
HKGVPTKAIENAFSVAEEYDVGIKAYILIKPPFISEKEAIADAIDTANKCIEMGCSRISF
CCCCCHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCHHHCC
CPASIHKGTLIETLWKKNQYRPPFLWSILEILKEVKSKNPDALVMCDTAGVSSKRGAHNN
CCHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
IDCTCNDKIKDIFNDFTVTQKIEKLDIECDCKKEWIEYMEYEQKNIVPLGDEKLI
CCEEECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]