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The map label for this gene is 45358458

Identifier: 45358458

GI number: 45358458

Start: 888224

End: 888832

Strand: Direct

Name: 45358458

Synonym: MMP0895

Alternate gene names: NA

Gene position: 888224-888832 (Clockwise)

Preceding gene: 45358457

Following gene: 45358459

Centisome position: 53.47

GC content: 30.05

Gene sequence:

>609_bases
TTGAAAGGATTGAACATGAGGAACAATTACGGCATTCAAAAATGGCACAGTCACGGAGCACTGCTCTGTAATTCTGAAAA
ATATGCTGAAGCACTCGAGTGCTATGATAAAATACTTTCATACTATCCAGACGATTTTTTAGCAGTGTTTGGAAAAGGAA
TGGTTTTTTTAAAACTTAAAGAATACGAAAAAGCGCTTCAATGTTTTAACAGCGTTTTAAACATGAATCCATCATACATT
CCTGCAATAAAAAATAAAAAACAAGTAGAAGAAAAGTTAAAAAAGCAGGAAAGCGAAAATTATAATAAATTTTCAAAATT
GGGTGTTGAAAACTACAAACAGGGAAATTTTGAGAAGTCCCTTAGCTATTTTGAAAAAGCTTTTGAAATAAATCCCTATT
CAGAAACTTTGAGAAAAAATATTGAAACTACACGCCTTAAATTAAAAGAAATTCTTCCAATAAGATGGAATAACAAAGGT
GTCGAATACTACAAGGTTAAAAACTATCAAAAAGCACTCGAATGCTTTGAAAAAGCTGTTAAATTAAATCCTAAATTTGA
ATCTGCGTTGAAAAATAAGACAATGGTTCAAAAGTTAATTAAGAATTGA

Upstream 100 bases:

>100_bases
AATATCTCTTTTTTAAATTAAATTCTCTACCTACACAATAGCTATTTATTTTCAAACTTCATTATTCATTATATCAAAAG
ATTTGGACTGTTTTTAACTT

Downstream 100 bases:

>100_bases
GTTTATTTTGTTTGTGATTTCATGATTAAAAACTTAAAAAAAGATGGAATTGTAAAAGACAGTGCATACATGATATTTTC
AAATATGTATTCTAAATTTG

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Family; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Domain-Containing Protein; TPR Domain-Containing Protein; Tetratricopeptide Protein; Tetratricopeptide TPR_2 Repeat Protein; Serine/Threonine Kinase; O-Linked GlcNAc Transferase; O-Linked N-Acetylglucosamine Transferase

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MKGLNMRNNYGIQKWHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLNMNPSYI
PAIKNKKQVEEKLKKQESENYNKFSKLGVENYKQGNFEKSLSYFEKAFEINPYSETLRKNIETTRLKLKEILPIRWNNKG
VEYYKVKNYQKALECFEKAVKLNPKFESALKNKTMVQKLIKN

Sequences:

>Translated_202_residues
MKGLNMRNNYGIQKWHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLNMNPSYI
PAIKNKKQVEEKLKKQESENYNKFSKLGVENYKQGNFEKSLSYFEKAFEINPYSETLRKNIETTRLKLKEILPIRWNNKG
VEYYKVKNYQKALECFEKAVKLNPKFESALKNKTMVQKLIKN
>Mature_202_residues
MKGLNMRNNYGIQKWHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLKEYEKALQCFNSVLNMNPSYI
PAIKNKKQVEEKLKKQESENYNKFSKLGVENYKQGNFEKSLSYFEKAFEINPYSETLRKNIETTRLKLKEILPIRWNNKG
VEYYKVKNYQKALECFEKAVKLNPKFESALKNKTMVQKLIKN

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23850; Mature: 23850

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGLNMRNNYGIQKWHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLK
CCCCCCCCCCCCHHHHCCCCEEECCHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEHH
EYEKALQCFNSVLNMNPSYIPAIKNKKQVEEKLKKQESENYNKFSKLGVENYKQGNFEKS
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHH
LSYFEKAFEINPYSETLRKNIETTRLKLKEILPIRWNNKGVEYYKVKNYQKALECFEKAV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEHHHHHHHHHHHHHHH
KLNPKFESALKNKTMVQKLIKN
CCCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKGLNMRNNYGIQKWHSHGALLCNSEKYAEALECYDKILSYYPDDFLAVFGKGMVFLKLK
CCCCCCCCCCCCHHHHCCCCEEECCHHHHHHHHHHHHHHHHCCHHHHHHHCCCEEEEEHH
EYEKALQCFNSVLNMNPSYIPAIKNKKQVEEKLKKQESENYNKFSKLGVENYKQGNFEKS
HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCHHHH
LSYFEKAFEINPYSETLRKNIETTRLKLKEILPIRWNNKGVEYYKVKNYQKALECFEKAV
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEHHHHHHHHHHHHHHH
KLNPKFESALKNKTMVQKLIKN
CCCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA