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The map label for this gene is yjiM [C]

Identifier: 45358399

GI number: 45358399

Start: 831187

End: 832368

Strand: Direct

Name: yjiM [C]

Synonym: MMP0836

Alternate gene names: 45358399

Gene position: 831187-832368 (Clockwise)

Preceding gene: 45358396

Following gene: 45358401

Centisome position: 50.04

GC content: 32.32

Gene sequence:

>1182_bases
ATGAAAAATAATTTAAATAATATCTTAGAAGATAGTTTAAACTATAAAATCGGTGAAACTTTGGACGAATTAAAAAGCAT
CAAAAAACTCGATGAGATTTTTTCAAAAAGAAAAGATCAATTATATCGAGAAAAAGACGAAGGAAAAAAAGTATATGGTA
GATTTTGTGTATTTGTACCTACCGAAATTATATGTGCGGCTGATGCAATTCCTGTTGGACTTTGTGGTGGAAAAGAGTCA
ACCATTCCATCAGCAGAAGAGGATTTACCAAGAAATATCTGTCCATTAATTAAATCTTCATATGGATTTAAGAAAGATAA
AGCCTGCCCTTATTTTGAAGCTTCAGACGTCATTGTTGGCGAAACTACGTGTGATGGAAAGAAAAAGATGTTTGAACACA
TGGCAGAACTGTCAGAAATGTACGTTATGCATCTTCCCCACTTTAAAGATGAAAGATCATATGAATTATGGCTCAAAGAA
GTTTATGACTTCAAAGATTACGTAGAAAAATTTACTGGAAACAAGATTACTGAAGAAAAATTAAAAGAAGCAATTGATGA
AGAAAATGAAGAAAGAATGTTATCCCACAAGCTTTACGAATTAAGATCCCAAATCCCAACGCCAATAACTGGAAAAGATG
CATTAAAAATATTCCAAAGGTCATTTTTACTCGATATAAAAGATAGACTCGCAATTTTAAAAGAAGTAATATCTGAACTC
GAAGAAAGAGTTAAAAATGGCGAAGGATACACTGGAAAAAGAATCTTGGTTGCAGGATGCCCGATGGTTGCAGGAAATAC
CAAAATTGTGGACATTATCGAAGAAGTTGGCGGACTTGTAGTCGGTGAAGAAACATGTACTGGAACCAGAAAATTTGATA
ATTTAGTTAATGGATACACAATTGACGATCTTGCAGAAAGATACTTTAAAATCAACTGTGCATCTGCATTTAAAAACGAC
AGCAGAATTGAAAGAATTAAAGAACTTGTAAAAGAACAAAATGCTGACGGTGTTGTTTATTATACCTTACAATACTGCCA
CACATTTAATGTCGAAGGAGCATTAATTGAAAAAGAACTTAAAAATTTAGGAATTCCAATAATTAGAATAGAAACAGACT
ATTCAGAAAGCGATAAAGAACAGATAAAAACGAGACTTGAAGCGTTTGTTGAAATGATTTAA

Upstream 100 bases:

>100_bases
TGGATTATTTAATTACCTATATATATTGATAATGGTATTAGATTTTAGCAGTTATTTTATATTTAATAGATATTCTAATA
GATATCAAACTCAATAAATA

Downstream 100 bases:

>100_bases
ATTATTTTATTTTTTTATAAAAGTGATTCTTTTGCCAACTTATCTGCAATTTCGTTATTTTTATCTCCCGAATGTGCCTT
AACTTTTACAAATTCAATAT

Product: 2-hydroxyglutaryl-CoA dehydratase subunit D-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MKNNLNNILEDSLNYKIGETLDELKSIKKLDEIFSKRKDQLYREKDEGKKVYGRFCVFVPTEIICAADAIPVGLCGGKES
TIPSAEEDLPRNICPLIKSSYGFKKDKACPYFEASDVIVGETTCDGKKKMFEHMAELSEMYVMHLPHFKDERSYELWLKE
VYDFKDYVEKFTGNKITEEKLKEAIDEENEERMLSHKLYELRSQIPTPITGKDALKIFQRSFLLDIKDRLAILKEVISEL
EERVKNGEGYTGKRILVAGCPMVAGNTKIVDIIEEVGGLVVGEETCTGTRKFDNLVNGYTIDDLAERYFKINCASAFKND
SRIERIKELVKEQNADGVVYYTLQYCHTFNVEGALIEKELKNLGIPIIRIETDYSESDKEQIKTRLEAFVEMI

Sequences:

>Translated_393_residues
MKNNLNNILEDSLNYKIGETLDELKSIKKLDEIFSKRKDQLYREKDEGKKVYGRFCVFVPTEIICAADAIPVGLCGGKES
TIPSAEEDLPRNICPLIKSSYGFKKDKACPYFEASDVIVGETTCDGKKKMFEHMAELSEMYVMHLPHFKDERSYELWLKE
VYDFKDYVEKFTGNKITEEKLKEAIDEENEERMLSHKLYELRSQIPTPITGKDALKIFQRSFLLDIKDRLAILKEVISEL
EERVKNGEGYTGKRILVAGCPMVAGNTKIVDIIEEVGGLVVGEETCTGTRKFDNLVNGYTIDDLAERYFKINCASAFKND
SRIERIKELVKEQNADGVVYYTLQYCHTFNVEGALIEKELKNLGIPIIRIETDYSESDKEQIKTRLEAFVEMI
>Mature_393_residues
MKNNLNNILEDSLNYKIGETLDELKSIKKLDEIFSKRKDQLYREKDEGKKVYGRFCVFVPTEIICAADAIPVGLCGGKES
TIPSAEEDLPRNICPLIKSSYGFKKDKACPYFEASDVIVGETTCDGKKKMFEHMAELSEMYVMHLPHFKDERSYELWLKE
VYDFKDYVEKFTGNKITEEKLKEAIDEENEERMLSHKLYELRSQIPTPITGKDALKIFQRSFLLDIKDRLAILKEVISEL
EERVKNGEGYTGKRILVAGCPMVAGNTKIVDIIEEVGGLVVGEETCTGTRKFDNLVNGYTIDDLAERYFKINCASAFKND
SRIERIKELVKEQNADGVVYYTLQYCHTFNVEGALIEKELKNLGIPIIRIETDYSESDKEQIKTRLEAFVEMI

Specific function: Unknown

COG id: COG1775

COG function: function code E; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjiM [H]

Homologues:

Organism=Escherichia coli, GI87082427, Length=355, Percent_Identity=42.5352112676056, Blast_Score=283, Evalue=2e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010327 [H]

Pfam domain/function: PF06050 HGD-D [H]

EC number: NA

Molecular weight: Translated: 45102; Mature: 45102

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNNLNNILEDSLNYKIGETLDELKSIKKLDEIFSKRKDQLYREKDEGKKVYGRFCVFVP
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECC
TEIICAADAIPVGLCGGKESTIPSAEEDLPRNICPLIKSSYGFKKDKACPYFEASDVIVG
HHHHHHCCCCCEEECCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
ETTCDGKKKMFEHMAELSEMYVMHLPHFKDERSYELWLKEVYDFKDYVEKFTGNKITEEK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LKEAIDEENEERMLSHKLYELRSQIPTPITGKDALKIFQRSFLLDIKDRLAILKEVISEL
HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EERVKNGEGYTGKRILVAGCPMVAGNTKIVDIIEEVGGLVVGEETCTGTRKFDNLVNGYT
HHHHHCCCCCCCCEEEEECCCEECCCCHHHHHHHHHCCEEECCHHCCCHHHHHHHHCCCC
IDDLAERYFKINCASAFKNDSRIERIKELVKEQNADGVVYYTLQYCHTFNVEGALIEKEL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCHHHHHHHH
KNLGIPIIRIETDYSESDKEQIKTRLEAFVEMI
HHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNNLNNILEDSLNYKIGETLDELKSIKKLDEIFSKRKDQLYREKDEGKKVYGRFCVFVP
CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEECC
TEIICAADAIPVGLCGGKESTIPSAEEDLPRNICPLIKSSYGFKKDKACPYFEASDVIVG
HHHHHHCCCCCEEECCCCCCCCCCCHHHCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
ETTCDGKKKMFEHMAELSEMYVMHLPHFKDERSYELWLKEVYDFKDYVEKFTGNKITEEK
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHH
LKEAIDEENEERMLSHKLYELRSQIPTPITGKDALKIFQRSFLLDIKDRLAILKEVISEL
HHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EERVKNGEGYTGKRILVAGCPMVAGNTKIVDIIEEVGGLVVGEETCTGTRKFDNLVNGYT
HHHHHCCCCCCCCEEEEECCCEECCCCHHHHHHHHHCCEEECCHHCCCHHHHHHHHCCCC
IDDLAERYFKINCASAFKNDSRIERIKELVKEQNADGVVYYTLQYCHTFNVEGALIEKEL
HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCCCHHHHHHHH
KNLGIPIIRIETDYSESDKEQIKTRLEAFVEMI
HHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]