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The map label for this gene is vhcD [H]

Identifier: 45358384

GI number: 45358384

Start: 815353

End: 815775

Strand: Direct

Name: vhcD [H]

Synonym: MMP0821

Alternate gene names: 45358384

Gene position: 815353-815775 (Clockwise)

Preceding gene: 45358376

Following gene: 45358385

Centisome position: 49.08

GC content: 40.9

Gene sequence:

>423_bases
TTGTCTGAAGAATGGGAGCCAAAGATAGTCGGCTTTTGTTGCAACTGGTGTACCTATGGTGGTGCAGATACAGCAGGAGT
TGGTAGAATGCAGTACCCTCCAAGCATAAGAATAATACGGGTGATGTGTTCAGGAAGGATTGAACCATCATTTATATTAA
AAGCTTTTAAAGAAGGTGCAGACGGTGTTTTTATAGGCGGATGCCACCTTGGAGATTGCCACTACGATGCAGGAAATTAC
AAATGGCAAAGAAGAGTCATGATGCTCTACGACATGCTTGATGAACTTGGAATTGGCAGGGAAAGAGTTCTCCACGAATG
GATTTCAGCTTCAGAAGGTGAAAAATTCCAGACTAAAATGAACGAAATTTACGACAGAATAAAAGCTTTAGGTCCGTGCA
CCTTGAATGAAAATCTTAAATAA

Upstream 100 bases:

>100_bases
TTGTCTAATTTATATATTAATAATTGTTATACTCACATCAATTAGATAAACTATTGTAGGTATTAGTTTACCAAATATCT
AATAACAATGAGGTGAAATT

Downstream 100 bases:

>100_bases
CTATTAAGGTGGTTTTATGGTAAAAATAGCTACAACATGGCTTGCATGCTGTTCCGGATGTCACATAAGTCTTGTAGATT
TACATGAAGATTTATTGAAA

Product: coenzyme F420-non-reducing hydrogenase subunit delta

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MSEEWEPKIVGFCCNWCTYGGADTAGVGRMQYPPSIRIIRVMCSGRIEPSFILKAFKEGADGVFIGGCHLGDCHYDAGNY
KWQRRVMMLYDMLDELGIGRERVLHEWISASEGEKFQTKMNEIYDRIKALGPCTLNENLK

Sequences:

>Translated_140_residues
MSEEWEPKIVGFCCNWCTYGGADTAGVGRMQYPPSIRIIRVMCSGRIEPSFILKAFKEGADGVFIGGCHLGDCHYDAGNY
KWQRRVMMLYDMLDELGIGRERVLHEWISASEGEKFQTKMNEIYDRIKALGPCTLNENLK
>Mature_139_residues
SEEWEPKIVGFCCNWCTYGGADTAGVGRMQYPPSIRIIRVMCSGRIEPSFILKAFKEGADGVFIGGCHLGDCHYDAGNYK
WQRRVMMLYDMLDELGIGRERVLHEWISASEGEKFQTKMNEIYDRIKALGPCTLNENLK

Specific function: Unknown

COG id: COG1908

COG function: function code C; Coenzyme F420-reducing hydrogenase, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mvhD/vhuD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003813 [H]

Pfam domain/function: PF02662 FlpD [H]

EC number: NA

Molecular weight: Translated: 15952; Mature: 15820

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
10.0 %Cys+Met (Translated Protein)
5.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
9.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEEWEPKIVGFCCNWCTYGGADTAGVGRMQYPPSIRIIRVMCSGRIEPSFILKAFKEGA
CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCC
DGVFIGGCHLGDCHYDAGNYKWQRRVMMLYDMLDELGIGRERVLHEWISASEGEKFQTKM
CEEEECCEECCCCEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHH
NEIYDRIKALGPCTLNENLK
HHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
SEEWEPKIVGFCCNWCTYGGADTAGVGRMQYPPSIRIIRVMCSGRIEPSFILKAFKEGA
CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCC
DGVFIGGCHLGDCHYDAGNYKWQRRVMMLYDMLDELGIGRERVLHEWISASEGEKFQTKM
CEEEECCEECCCCEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHH
NEIYDRIKALGPCTLNENLK
HHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1603063 [H]