| Definition | Methanococcus maripaludis S2 chromosome, complete genome. |
|---|---|
| Accession | NC_005791 |
| Length | 1,661,137 |
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The map label for this gene is bm3R1 [H]
Identifier: 45358354
GI number: 45358354
Start: 784022
End: 784600
Strand: Direct
Name: bm3R1 [H]
Synonym: MMP0791
Alternate gene names: 45358354
Gene position: 784022-784600 (Clockwise)
Preceding gene: 45358353
Following gene: 45358355
Centisome position: 47.2
GC content: 36.1
Gene sequence:
>579_bases ATGAAAGCAAATATTGAAGACAAAAGAAAAGCTATAATGGACGCCGCTTTGAAACTTTTCACTGAACGCGGGTTTCACGG TACATCTACAGCCCAGATTTCAAAAGAAGCAGGTGTAGCTACTGGTACACTCTTCCATTATTTCCCAACAAAAGAAGACC TTATAAACAACCTGTATTTTGAGGTAAAAGCGGATTTAAGCCGGACAATGGTCAAAGACCTCGAACCACAGGTTAACTTT AAAGACAGGTTGAAAAAAATATGGGATAATTTAGTTAGATGGGGCTTAGATAACCATAAAGAGTTTCTTTTTGTCGGACA ATTTTGCAATTCGCCTTACATATCGAATTTTACGCGTGAAGAAGTAATGAAAGAGTACTTTACCATTCATAAACTCATTG AAGACGGAGTAACCGCTGGAACTGTCAAGAAATTACCTTTGGAACTGGTTATTGCAATGTTTTACCAAAACAGCAGGACA GTAGTGCAAGTAATTTCAAGCTATGGTTTATCTAAAGATAAAAATAAAATAATTGATGAGGGTTTTGAAGTTATATGGGC AGGACTTTCTAAAAACTAA
Upstream 100 bases:
>100_bases AACCCTTAACTCATCAAAATGTATTACTGACTAATCAGTCAAGTTTATATAGCAAAACAACAGTATATTTAATTGACTAA TCAGTCAGGATGAGATATAT
Downstream 100 bases:
>100_bases TTTTTAATTAACACATGGCTGATTAATCAATCTCTAAAATTTACCGATTATTTAGTATAATCTTAGCAATTAACTTAAAA CCAAAATCTGAGGGTGAAAA
Product: TetR family transcriptional regulator Member
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MKANIEDKRKAIMDAALKLFTERGFHGTSTAQISKEAGVATGTLFHYFPTKEDLINNLYFEVKADLSRTMVKDLEPQVNF KDRLKKIWDNLVRWGLDNHKEFLFVGQFCNSPYISNFTREEVMKEYFTIHKLIEDGVTAGTVKKLPLELVIAMFYQNSRT VVQVISSYGLSKDKNKIIDEGFEVIWAGLSKN
Sequences:
>Translated_192_residues MKANIEDKRKAIMDAALKLFTERGFHGTSTAQISKEAGVATGTLFHYFPTKEDLINNLYFEVKADLSRTMVKDLEPQVNF KDRLKKIWDNLVRWGLDNHKEFLFVGQFCNSPYISNFTREEVMKEYFTIHKLIEDGVTAGTVKKLPLELVIAMFYQNSRT VVQVISSYGLSKDKNKIIDEGFEVIWAGLSKN >Mature_192_residues MKANIEDKRKAIMDAALKLFTERGFHGTSTAQISKEAGVATGTLFHYFPTKEDLINNLYFEVKADLSRTMVKDLEPQVNF KDRLKKIWDNLVRWGLDNHKEFLFVGQFCNSPYISNFTREEVMKEYFTIHKLIEDGVTAGTVKKLPLELVIAMFYQNSRT VVQVISSYGLSKDKNKIIDEGFEVIWAGLSKN
Specific function: Negatively controls the expression of the cytochrome p450BM-3 gene at the transcriptional level [H]
COG id: COG1309
COG function: function code K; Transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009057 - InterPro: IPR015893 - InterPro: IPR011075 - InterPro: IPR001647 [H]
Pfam domain/function: PF00440 TetR_N [H]
EC number: NA
Molecular weight: Translated: 22068; Mature: 22068
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKANIEDKRKAIMDAALKLFTERGFHGTSTAQISKEAGVATGTLFHYFPTKEDLINNLYF CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHEEECCCHHHHHHHHHH EVKADLSRTMVKDLEPQVNFKDRLKKIWDNLVRWGLDNHKEFLFVGQFCNSPYISNFTRE HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCCCCCCHHHH EVMKEYFTIHKLIEDGVTAGTVKKLPLELVIAMFYQNSRTVVQVISSYGLSKDKNKIIDE HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHH GFEVIWAGLSKN HHHHHHHCCCCC >Mature Secondary Structure MKANIEDKRKAIMDAALKLFTERGFHGTSTAQISKEAGVATGTLFHYFPTKEDLINNLYF CCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHHEEECCCHHHHHHHHHH EVKADLSRTMVKDLEPQVNFKDRLKKIWDNLVRWGLDNHKEFLFVGQFCNSPYISNFTRE HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHCCCCCCCHHHH EVMKEYFTIHKLIEDGVTAGTVKKLPLELVIAMFYQNSRTVVQVISSYGLSKDKNKIIDE HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHH GFEVIWAGLSKN HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1544926; 2544578; 8428974 [H]