Click here to switch to the map view.

The map label for this gene is 45358282

Identifier: 45358282

GI number: 45358282

Start: 711623

End: 712030

Strand: Direct

Name: 45358282

Synonym: MMP0719

Alternate gene names: NA

Gene position: 711623-712030 (Clockwise)

Preceding gene: 45358281

Following gene: 161621699

Centisome position: 42.84

GC content: 30.88

Gene sequence:

>408_bases
ATGGCTAACGTAGAAAGGATAAGCCTTTCTTTTCCAAAATTTTTACTTTCTGAACTGGATTCTATTGTAGAATCTAAAAA
TTATTCCAGCAGGAGCGAACTCATTCGTGACGCAGTAAGAAAGTATGTAATTGAAAATAACGCGCTAAATCCTGGAAAAA
CTGTAAATGGGATGATTACAGTTGTTTACAGTCCATCAAAAGATGCGATGGAAGAAATGAGCCATATTTATTTTGATTAC
GAGAATATAATAAAATCAATGAACCAGTCTTATGTAAAAACTGCATGCGAAAAGAACAAAAAACTCGAAATTTTTGTAAT
CGAAGGTGAATCTGATATAGTTTCTGAATTCTATCAGAAAATACAAAACATAAGTGGGAAAATCTACGATAACATTATTA
TTTTTTAA

Upstream 100 bases:

>100_bases
TTCATGGCTGTTCGATATCAGGAAAATGATGACAAAGCTTGGTATGTATTAATTCCAAGATAACTTTTTTAATGTTAATT
ATTTATCTATCGGTGAAATA

Downstream 100 bases:

>100_bases
CAAATACTTTTTTATGTTCAATATTACTAAATTATTTAATAGTAATAATAATTATATCACAAACCATTTAAAAACGGTCA
AAAATTTATTTATATCCTAA

Product: transcriptional regluator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 134

Protein sequence:

>135_residues
MANVERISLSFPKFLLSELDSIVESKNYSSRSELIRDAVRKYVIENNALNPGKTVNGMITVVYSPSKDAMEEMSHIYFDY
ENIIKSMNQSYVKTACEKNKKLEIFVIEGESDIVSEFYQKIQNISGKIYDNIIIF

Sequences:

>Translated_135_residues
MANVERISLSFPKFLLSELDSIVESKNYSSRSELIRDAVRKYVIENNALNPGKTVNGMITVVYSPSKDAMEEMSHIYFDY
ENIIKSMNQSYVKTACEKNKKLEIFVIEGESDIVSEFYQKIQNISGKIYDNIIIF
>Mature_134_residues
ANVERISLSFPKFLLSELDSIVESKNYSSRSELIRDAVRKYVIENNALNPGKTVNGMITVVYSPSKDAMEEMSHIYFDYE
NIIKSMNQSYVKTACEKNKKLEIFVIEGESDIVSEFYQKIQNISGKIYDNIIIF

Specific function: Unknown

COG id: COG0864

COG function: function code K; Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transcriptional regulatory CopG/NikR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013321
- InterPro:   IPR002145
- InterPro:   IPR010985
- InterPro:   IPR014864 [H]

Pfam domain/function: PF08753 NikR_C; PF01402 RHH_1 [H]

EC number: NA

Molecular weight: Translated: 15553; Mature: 15422

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANVERISLSFPKFLLSELDSIVESKNYSSRSELIRDAVRKYVIENNALNPGKTVNGMIT
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
VVYSPSKDAMEEMSHIYFDYENIIKSMNQSYVKTACEKNKKLEIFVIEGESDIVSEFYQK
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHH
IQNISGKIYDNIIIF
HHHCCCCHHCCEEEC
>Mature Secondary Structure 
ANVERISLSFPKFLLSELDSIVESKNYSSRSELIRDAVRKYVIENNALNPGKTVNGMIT
CCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEE
VVYSPSKDAMEEMSHIYFDYENIIKSMNQSYVKTACEKNKKLEIFVIEGESDIVSEFYQK
EEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHH
IQNISGKIYDNIIIF
HHHCCCCHHCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]