| Definition | Methanococcus maripaludis S2 chromosome, complete genome. |
|---|---|
| Accession | NC_005791 |
| Length | 1,661,137 |
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The map label for this gene is modD [H]
Identifier: 45358079
GI number: 45358079
Start: 521710
End: 522561
Strand: Direct
Name: modD [H]
Synonym: MMP0516
Alternate gene names: 45358079
Gene position: 521710-522561 (Clockwise)
Preceding gene: 45358078
Following gene: 45358089
Centisome position: 31.41
GC content: 34.51
Gene sequence:
>852_bases ATGTCATTTTATATTCCTGATTATGAACTTGAAAAAATAATTGAAGAGGATATAAATCCCCTTGATTTAACCTCGCAGAT AATGAAACTGGATCGATTTAATGCAAAACTTGCATACAAAGCACGACACGATATGGTTTTGTGCTGTACTGAAGAAGCTG AGAGAATATGTAAAATACTCGGGCTGGAAGTAATTTCTTATAAACGCACTGGATCTTATGTAAAAGAAGGCGAAGTATTT TTTGAAGCAAAAGGGAGGGCTGACAATGTTCACCTTGCATGGAAAAGCGTTTTAAGGCTTCTTGAAGGATACTGCGGGAT GGCTACGAGAACTTACGAGTTTGTGACCTTAGCAAGAAAGTATAACGAAAACACAAATGTTGTAACCACTCGAAAAAATC TTGCAGGAACTAAAAAACCGACAATAAAAGCAATAGTTGCAGGCGGAGCATATCCTCACAGACTCGGTCTTTCTGAAACT ATATTGATATTTGATGAACATCTGGCTTTTGTTGATGGTGATGAAGAACTAAAATGTGTTTTAAAAGAAATGAAAGCAAA TGCTTTAGAAAAAAAGATAGGAATAGAAGTAGATAATTTTGAAACGGGTATAAAATACGTTAAAATGGGTTTTGATTATA TTCAGCTCGATAAAGTTGATTCCAAAACCGTTGAAAAGTTCGTAAAAGCCGCAAAAGAAATAAATCCAAACATTACGATA GTTGCAGCAGGTGGAATTACCATTCAAAATATAGAAGAATATGCTAAAACCGGTGCTGAAGTTATTGTTACTTCCGCCCT TTATTTTGGAAAAGCTGCGGATATAAAAACAATAATTGAAAAAATAGACTAA
Upstream 100 bases:
>100_bases AAAAAGATTTTATATGCTGGTGAATTAAATGTTAAATCAAGTGATTTGGTGTTTGGTTTAAGTAATATTTAATTTAAAAA AACCTAAAAAGAGGTTTAAT
Downstream 100 bases:
>100_bases GTATAACGAATTAAACTAAATTATAATTTAATATTCATTTTTGTACAGAATCCCGTCGTGTCCTGTAACAATATTTTTAT TAAGGCTTTTTATTTTTCTT
Product: quinolinate phosphoribosyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSFYIPDYELEKIIEEDINPLDLTSQIMKLDRFNAKLAYKARHDMVLCCTEEAERICKILGLEVISYKRTGSYVKEGEVF FEAKGRADNVHLAWKSVLRLLEGYCGMATRTYEFVTLARKYNENTNVVTTRKNLAGTKKPTIKAIVAGGAYPHRLGLSET ILIFDEHLAFVDGDEELKCVLKEMKANALEKKIGIEVDNFETGIKYVKMGFDYIQLDKVDSKTVEKFVKAAKEINPNITI VAAGGITIQNIEEYAKTGAEVIVTSALYFGKAADIKTIIEKID
Sequences:
>Translated_283_residues MSFYIPDYELEKIIEEDINPLDLTSQIMKLDRFNAKLAYKARHDMVLCCTEEAERICKILGLEVISYKRTGSYVKEGEVF FEAKGRADNVHLAWKSVLRLLEGYCGMATRTYEFVTLARKYNENTNVVTTRKNLAGTKKPTIKAIVAGGAYPHRLGLSET ILIFDEHLAFVDGDEELKCVLKEMKANALEKKIGIEVDNFETGIKYVKMGFDYIQLDKVDSKTVEKFVKAAKEINPNITI VAAGGITIQNIEEYAKTGAEVIVTSALYFGKAADIKTIIEKID >Mature_282_residues SFYIPDYELEKIIEEDINPLDLTSQIMKLDRFNAKLAYKARHDMVLCCTEEAERICKILGLEVISYKRTGSYVKEGEVFF EAKGRADNVHLAWKSVLRLLEGYCGMATRTYEFVTLARKYNENTNVVTTRKNLAGTKKPTIKAIVAGGAYPHRLGLSETI LIFDEHLAFVDGDEELKCVLKEMKANALEKKIGIEVDNFETGIKYVKMGFDYIQLDKVDSKTVEKFVKAAKEINPNITIV AAGGITIQNIEEYAKTGAEVIVTSALYFGKAADIKTIIEKID
Specific function: NAD biosynthesis; aspartate to NaMN; third (last) step. [C]
COG id: COG0157
COG function: function code H; Nicotinate-nucleotide pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadC/modD family [H]
Homologues:
Organism=Escherichia coli, GI1786299, Length=237, Percent_Identity=24.8945147679325, Blast_Score=64, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6321162, Length=272, Percent_Identity=23.1617647058824, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006242 - InterPro: IPR002638 - InterPro: IPR022412 [H]
Pfam domain/function: PF01729 QRPTase_C; PF02749 QRPTase_N [H]
EC number: 2.4.2.-
Molecular weight: Translated: 31846; Mature: 31715
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFYIPDYELEKIIEEDINPLDLTSQIMKLDRFNAKLAYKARHDMVLCCTEEAERICKIL CCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEEECHHHHHHHHHH GLEVISYKRTGSYVKEGEVFFEAKGRADNVHLAWKSVLRLLEGYCGMATRTYEFVTLARK HHHHEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH YNENTNVVTTRKNLAGTKKPTIKAIVAGGAYPHRLGLSETILIFDEHLAFVDGDEELKCV HCCCCCEEEECHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCEEEECCCHHHHHH LKEMKANALEKKIGIEVDNFETGIKYVKMGFDYIQLDKVDSKTVEKFVKAAKEINPNITI HHHHHHHHHHHHHCCEECCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCEEE VAAGGITIQNIEEYAKTGAEVIVTSALYFGKAADIKTIIEKID EEECCEEHHHHHHHHHCCHHEEEHHHHHHCCCCHHHHHHHHCC >Mature Secondary Structure SFYIPDYELEKIIEEDINPLDLTSQIMKLDRFNAKLAYKARHDMVLCCTEEAERICKIL CCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEECCCCEEEEECHHHHHHHHHH GLEVISYKRTGSYVKEGEVFFEAKGRADNVHLAWKSVLRLLEGYCGMATRTYEFVTLARK HHHHEEEECCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH YNENTNVVTTRKNLAGTKKPTIKAIVAGGAYPHRLGLSETILIFDEHLAFVDGDEELKCV HCCCCCEEEECHHCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEECCEEEECCCHHHHHH LKEMKANALEKKIGIEVDNFETGIKYVKMGFDYIQLDKVDSKTVEKFVKAAKEINPNITI HHHHHHHHHHHHHCCEECCHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCCEEE VAAGGITIQNIEEYAKTGAEVIVTSALYFGKAADIKTIIEKID EEECCEEHHHHHHHHHCCHHEEEHHHHHHCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11248100 [H]