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The map label for this gene is yifB [C]

Identifier: 45358033

GI number: 45358033

Start: 465802

End: 467826

Strand: Direct

Name: yifB [C]

Synonym: MMP0470

Alternate gene names: 45358033

Gene position: 465802-467826 (Clockwise)

Preceding gene: 45358032

Following gene: 45358034

Centisome position: 28.04

GC content: 38.52

Gene sequence:

>2025_bases
TTGGATGATAAAAAAATAGCCGATTTAAGGCCTAAAATTACCGATTATCTAAAAGAAAACTACTCTGAAGATATGTTAAA
AGAATCCGAAAGAGTTGCAGTCGATTTAAACGGCATGTATCATTACGGAATGTTTGAATTCATCGAATTTATAGAAAGTG
ATCCTAAAGAAGCGATAAATCTTTTAAAGGAATGCTACTATGACGCTTATCATGTTTACAAAGGCGAAAGGGCGGACTGT
ACCGTAACGATCAAGAACTTGCCGTTAATGATTAATAAAAATTCAAGAGGAAACGAGAGAACAATTGAAGACATCAAGGG
AAAAACACACGGAAAACTCGTTGAAATCGAAGGAATAATCGTAATGGCAACTAAAATCAAGTTAGCCCTAAAAGAAGCAG
TCCATATCTGTACAGCTTGTGGGGAAAAACGAAGAACCAAAATAGAACGGCCCTTTCAGGCTAATTTTGATCCGGTGTGC
CCGAAATGTGCGCAGAACATGACACTTCTTGAAGATGAATCAGAGTACGTTGATTTTCAGGAACTAAAAATTCAACAGCC
ATTAGATTTAATGGAAGACCCCGAAGAGCCCCCAAAATTCATAAGTGTTTTACTTGAAGATACTCAGGGAATCTACTGCG
GACGGGTAAAAGTTACTGGAATTCCAATAAAAAACCAGAAAAACAAAAATATCCCGCTTCACGACCTTTTAATCCTCGGA
TACAACTGCGAACCCATAAGTGAGAAGCTTGATGTTTCATTCAACGATGAAGAAATCGAGCAGTTTGAAACACTAGCAAA
AAACAAAGACGTATTAAAAATCCTTTCAAGAAGAATTGCGCCCCAAATCAAAGGAAACGATATAATAAAACAGTCAATTG
TTTTGCAACAGGTCAGAGGCGTTAAAAAGGGAAGAAAGAGAGCAGACAGCCACATTTTATTGATAACCGATCCAGGAACT
GGAAAGAGTGACGTTTTAAGATTTATTTCTGGAATTCCAGGAAATGTTTACAGCTCGATTTCAACTGCTTCAGGTGTGGG
CCTGACTGCAGGGGTGGTCCAGGAAAGGACTGAAATCGGGGACAGTACGTGGGTCATAAAGCCAGGTGTTTTAGTAAAAG
CAAACGGCGGAACGGCATGTCTTGATGAATTGACGGTTGAAAGAAGCGTTTTATCTTACATTTTAGAAGCAATGGAATCC
CAGACAATTCACATAAGCAAAGGTGGATTAAACACGAAACTTCCAGCGGGTTGTTCAATTTTGGCCGCCTGTAATCCAAA
ATACGGTCGATATAACGAACACGTTGCAGTAATTGAACAGATTAATATTCCAGCTCCATTATTAAGTCGGTTTGATTTAA
TATTCCCGATAAAAGACACGCCAAATAGAAATCGAGACAGCGACATTGCATATCACATTTTAGACACACACATTGCACTC
ATGGACAAGTCAAAAAATGAAGAAATCGGTTTATTTTCTGAAACAATCGGTGAACTAAAAGTAGACTTTGACTTTTTCTG
TAAATACATAGCATACGCAAGGCAGAAAACCCCGAAATTTACAAAAGAGTCTAAAGAGGTAATCCATGACTTTTATTTGA
ATTTAAGAAAGACTTCTGTTCAAATTACAGCAAGACAGCTCGAAGCACTTGTCCGACTTTCAGAAGCTCACGCGAAAGTC
AGGCTAAAGTCAGAAGTGGAACCTGAAGATGCGAAGTTTGCAATCTACTTGATGATTGAATCATTAAAAGAGGTTGCATA
TGACCATGAAACCGATTCATTTGACATTGACAAGATTTTTGGAACGTCAAGAAATGAACGATCGAAATTAAACATAATTT
TCGACATTATAAGGCGTTCCTCCAAGGTGGCTTATGGTGGAACGGTTTCCCGCGGAGATTTACTCACTGAAGCACAGCTC
GAAGGAATTCCTGAACTTGAAGTAATCGACCTAATAGGCAAGTTAAAGGTTATCGGTGACATTTACGAACCAAAAATCGG
TTTTTATAAAGATGCGAGGGCGTAA

Upstream 100 bases:

>100_bases
GAAGATCAGGTCCACGAAGCCTTAAAAAATGGTCTTGAAGTTCGATATTCACAAGATATCGGCGAATTTTATTCGATAAA
TTGTAGCGAGGGGTTATAAC

Downstream 100 bases:

>100_bases
ACCATGAACGAAAAGCTTCATTTAAATTTAATCGAAGAAATCGACGCGATAGCTGTAAGATATTTTCTTCACCAGATACA
GAACCTGGAAAGCGTTGATG

Product: MCE family-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 674; Mature: 674

Protein sequence:

>674_residues
MDDKKIADLRPKITDYLKENYSEDMLKESERVAVDLNGMYHYGMFEFIEFIESDPKEAINLLKECYYDAYHVYKGERADC
TVTIKNLPLMINKNSRGNERTIEDIKGKTHGKLVEIEGIIVMATKIKLALKEAVHICTACGEKRRTKIERPFQANFDPVC
PKCAQNMTLLEDESEYVDFQELKIQQPLDLMEDPEEPPKFISVLLEDTQGIYCGRVKVTGIPIKNQKNKNIPLHDLLILG
YNCEPISEKLDVSFNDEEIEQFETLAKNKDVLKILSRRIAPQIKGNDIIKQSIVLQQVRGVKKGRKRADSHILLITDPGT
GKSDVLRFISGIPGNVYSSISTASGVGLTAGVVQERTEIGDSTWVIKPGVLVKANGGTACLDELTVERSVLSYILEAMES
QTIHISKGGLNTKLPAGCSILAACNPKYGRYNEHVAVIEQINIPAPLLSRFDLIFPIKDTPNRNRDSDIAYHILDTHIAL
MDKSKNEEIGLFSETIGELKVDFDFFCKYIAYARQKTPKFTKESKEVIHDFYLNLRKTSVQITARQLEALVRLSEAHAKV
RLKSEVEPEDAKFAIYLMIESLKEVAYDHETDSFDIDKIFGTSRNERSKLNIIFDIIRRSSKVAYGGTVSRGDLLTEAQL
EGIPELEVIDLIGKLKVIGDIYEPKIGFYKDARA

Sequences:

>Translated_674_residues
MDDKKIADLRPKITDYLKENYSEDMLKESERVAVDLNGMYHYGMFEFIEFIESDPKEAINLLKECYYDAYHVYKGERADC
TVTIKNLPLMINKNSRGNERTIEDIKGKTHGKLVEIEGIIVMATKIKLALKEAVHICTACGEKRRTKIERPFQANFDPVC
PKCAQNMTLLEDESEYVDFQELKIQQPLDLMEDPEEPPKFISVLLEDTQGIYCGRVKVTGIPIKNQKNKNIPLHDLLILG
YNCEPISEKLDVSFNDEEIEQFETLAKNKDVLKILSRRIAPQIKGNDIIKQSIVLQQVRGVKKGRKRADSHILLITDPGT
GKSDVLRFISGIPGNVYSSISTASGVGLTAGVVQERTEIGDSTWVIKPGVLVKANGGTACLDELTVERSVLSYILEAMES
QTIHISKGGLNTKLPAGCSILAACNPKYGRYNEHVAVIEQINIPAPLLSRFDLIFPIKDTPNRNRDSDIAYHILDTHIAL
MDKSKNEEIGLFSETIGELKVDFDFFCKYIAYARQKTPKFTKESKEVIHDFYLNLRKTSVQITARQLEALVRLSEAHAKV
RLKSEVEPEDAKFAIYLMIESLKEVAYDHETDSFDIDKIFGTSRNERSKLNIIFDIIRRSSKVAYGGTVSRGDLLTEAQL
EGIPELEVIDLIGKLKVIGDIYEPKIGFYKDARA
>Mature_674_residues
MDDKKIADLRPKITDYLKENYSEDMLKESERVAVDLNGMYHYGMFEFIEFIESDPKEAINLLKECYYDAYHVYKGERADC
TVTIKNLPLMINKNSRGNERTIEDIKGKTHGKLVEIEGIIVMATKIKLALKEAVHICTACGEKRRTKIERPFQANFDPVC
PKCAQNMTLLEDESEYVDFQELKIQQPLDLMEDPEEPPKFISVLLEDTQGIYCGRVKVTGIPIKNQKNKNIPLHDLLILG
YNCEPISEKLDVSFNDEEIEQFETLAKNKDVLKILSRRIAPQIKGNDIIKQSIVLQQVRGVKKGRKRADSHILLITDPGT
GKSDVLRFISGIPGNVYSSISTASGVGLTAGVVQERTEIGDSTWVIKPGVLVKANGGTACLDELTVERSVLSYILEAMES
QTIHISKGGLNTKLPAGCSILAACNPKYGRYNEHVAVIEQINIPAPLLSRFDLIFPIKDTPNRNRDSDIAYHILDTHIAL
MDKSKNEEIGLFSETIGELKVDFDFFCKYIAYARQKTPKFTKESKEVIHDFYLNLRKTSVQITARQLEALVRLSEAHAKV
RLKSEVEPEDAKFAIYLMIESLKEVAYDHETDSFDIDKIFGTSRNERSKLNIIFDIIRRSSKVAYGGTVSRGDLLTEAQL
EGIPELEVIDLIGKLKVIGDIYEPKIGFYKDARA

Specific function: Unknown

COG id: COG1241

COG function: function code L; Predicted ATPase involved in replication control, Cdc46/Mcm family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MCM domain [H]

Homologues:

Organism=Homo sapiens, GI33469919, Length=540, Percent_Identity=31.8518518518519, Blast_Score=208, Evalue=1e-53,
Organism=Homo sapiens, GI33469917, Length=540, Percent_Identity=31.8518518518519, Blast_Score=208, Evalue=1e-53,
Organism=Homo sapiens, GI33469968, Length=606, Percent_Identity=31.8481848184819, Blast_Score=207, Evalue=2e-53,
Organism=Homo sapiens, GI23510448, Length=648, Percent_Identity=27.3148148148148, Blast_Score=196, Evalue=5e-50,
Organism=Homo sapiens, GI33469922, Length=557, Percent_Identity=32.6750448833034, Blast_Score=186, Evalue=5e-47,
Organism=Homo sapiens, GI33356547, Length=615, Percent_Identity=26.9918699186992, Blast_Score=183, Evalue=5e-46,
Organism=Homo sapiens, GI7427519, Length=372, Percent_Identity=34.1397849462366, Blast_Score=177, Evalue=4e-44,
Organism=Homo sapiens, GI19923727, Length=587, Percent_Identity=28.1090289608177, Blast_Score=175, Evalue=1e-43,
Organism=Homo sapiens, GI33469924, Length=578, Percent_Identity=28.0276816608997, Blast_Score=173, Evalue=6e-43,
Organism=Homo sapiens, GI6631095, Length=539, Percent_Identity=28.9424860853432, Blast_Score=170, Evalue=4e-42,
Organism=Homo sapiens, GI310115110, Length=242, Percent_Identity=33.4710743801653, Blast_Score=109, Evalue=9e-24,
Organism=Homo sapiens, GI310128402, Length=242, Percent_Identity=33.4710743801653, Blast_Score=109, Evalue=1e-23,
Organism=Homo sapiens, GI310119838, Length=242, Percent_Identity=33.4710743801653, Blast_Score=109, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI17508417, Length=583, Percent_Identity=30.7032590051458, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI71997752, Length=646, Percent_Identity=27.7089783281734, Blast_Score=199, Evalue=4e-51,
Organism=Caenorhabditis elegans, GI17562700, Length=543, Percent_Identity=29.2817679558011, Blast_Score=191, Evalue=7e-49,
Organism=Caenorhabditis elegans, GI17554306, Length=553, Percent_Identity=29.4755877034358, Blast_Score=190, Evalue=2e-48,
Organism=Caenorhabditis elegans, GI17562702, Length=510, Percent_Identity=29.4117647058824, Blast_Score=181, Evalue=2e-45,
Organism=Caenorhabditis elegans, GI71997563, Length=289, Percent_Identity=36.3321799307958, Blast_Score=154, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI71997571, Length=345, Percent_Identity=33.3333333333333, Blast_Score=154, Evalue=2e-37,
Organism=Saccharomyces cerevisiae, GI6325276, Length=542, Percent_Identity=30.8118081180812, Blast_Score=218, Evalue=3e-57,
Organism=Saccharomyces cerevisiae, GI6321237, Length=351, Percent_Identity=36.4672364672365, Blast_Score=192, Evalue=2e-49,
Organism=Saccharomyces cerevisiae, GI6319679, Length=592, Percent_Identity=31.0810810810811, Blast_Score=189, Evalue=1e-48,
Organism=Saccharomyces cerevisiae, GI6323304, Length=460, Percent_Identity=32.1739130434783, Blast_Score=178, Evalue=2e-45,
Organism=Saccharomyces cerevisiae, GI6319448, Length=550, Percent_Identity=26.5454545454545, Blast_Score=167, Evalue=4e-42,
Organism=Saccharomyces cerevisiae, GI6320803, Length=399, Percent_Identity=31.328320802005, Blast_Score=155, Evalue=2e-38,
Organism=Drosophila melanogaster, GI17137242, Length=530, Percent_Identity=32.8301886792453, Blast_Score=218, Evalue=1e-56,
Organism=Drosophila melanogaster, GI24645774, Length=711, Percent_Identity=28.2700421940928, Blast_Score=199, Evalue=5e-51,
Organism=Drosophila melanogaster, GI24639835, Length=542, Percent_Identity=30.6273062730627, Blast_Score=188, Evalue=1e-47,
Organism=Drosophila melanogaster, GI17137132, Length=558, Percent_Identity=27.9569892473118, Blast_Score=182, Evalue=6e-46,
Organism=Drosophila melanogaster, GI17530827, Length=575, Percent_Identity=28, Blast_Score=172, Evalue=8e-43,
Organism=Drosophila melanogaster, GI17647617, Length=539, Percent_Identity=30.6122448979592, Blast_Score=171, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24647251, Length=391, Percent_Identity=24.5524296675192, Blast_Score=110, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001208
- InterPro:   IPR018525
- InterPro:   IPR008047
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF00493 MCM [H]

EC number: NA

Molecular weight: Translated: 76097; Mature: 76097

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: PS50051 MCM_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDKKIADLRPKITDYLKENYSEDMLKESERVAVDLNGMYHYGMFEFIEFIESDPKEAIN
CCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCEEEEECCEEHHHHHHHHHHHHCCHHHHHH
LLKECYYDAYHVYKGERADCTVTIKNLPLMINKNSRGNERTIEDIKGKTHGKLVEIEGII
HHHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCCCHHHHHCCCCCCCEEEECCEE
VMATKIKLALKEAVHICTACGEKRRTKIERPFQANFDPVCPKCAQNMTLLEDESEYVDFQ
EEEHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHCCCEEEECCCHHCCHH
ELKIQQPLDLMEDPEEPPKFISVLLEDTQGIYCGRVKVTGIPIKNQKNKNIPLHDLLILG
HHCCCCCCHHHCCCCCCHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCHHHEEEEE
YNCEPISEKLDVSFNDEEIEQFETLAKNKDVLKILSRRIAPQIKGNDIIKQSIVLQQVRG
CCCCCCCHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
VKKGRKRADSHILLITDPGTGKSDVLRFISGIPGNVYSSISTASGVGLTAGVVQERTEIG
HHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHCC
DSTWVIKPGVLVKANGGTACLDELTVERSVLSYILEAMESQTIHISKGGLNTKLPAGCSI
CCEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEE
LAACNPKYGRYNEHVAVIEQINIPAPLLSRFDLIFPIKDTPNRNRDSDIAYHILDTHIAL
EEECCCCCCCCCCCEEEEEECCCCHHHHHCCCEEEECCCCCCCCCCCCCEEEHHHHHHEE
MDKSKNEEIGLFSETIGELKVDFDFFCKYIAYARQKTPKFTKESKEVIHDFYLNLRKTSV
EECCCCCCCCHHHHHHHHEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
QITARQLEALVRLSEAHAKVRLKSEVEPEDAKFAIYLMIESLKEVAYDHETDSFDIDKIF
HHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCHHHHH
GTSRNERSKLNIIFDIIRRSSKVAYGGTVSRGDLLTEAQLEGIPELEVIDLIGKLKVIGD
CCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHH
IYEPKIGFYKDARA
HCCCCCCCCCCCCC
>Mature Secondary Structure
MDDKKIADLRPKITDYLKENYSEDMLKESERVAVDLNGMYHYGMFEFIEFIESDPKEAIN
CCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCEEEEECCEEHHHHHHHHHHHHCCHHHHHH
LLKECYYDAYHVYKGERADCTVTIKNLPLMINKNSRGNERTIEDIKGKTHGKLVEIEGII
HHHHHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCCCCCHHHHHCCCCCCCEEEECCEE
VMATKIKLALKEAVHICTACGEKRRTKIERPFQANFDPVCPKCAQNMTLLEDESEYVDFQ
EEEHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCHHHHCCCEEEECCCHHCCHH
ELKIQQPLDLMEDPEEPPKFISVLLEDTQGIYCGRVKVTGIPIKNQKNKNIPLHDLLILG
HHCCCCCCHHHCCCCCCHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCCCCCHHHEEEEE
YNCEPISEKLDVSFNDEEIEQFETLAKNKDVLKILSRRIAPQIKGNDIIKQSIVLQQVRG
CCCCCCCHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHH
VKKGRKRADSHILLITDPGTGKSDVLRFISGIPGNVYSSISTASGVGLTAGVVQERTEIG
HHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHCC
DSTWVIKPGVLVKANGGTACLDELTVERSVLSYILEAMESQTIHISKGGLNTKLPAGCSI
CCEEEEECCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCEE
LAACNPKYGRYNEHVAVIEQINIPAPLLSRFDLIFPIKDTPNRNRDSDIAYHILDTHIAL
EEECCCCCCCCCCCEEEEEECCCCHHHHHCCCEEEECCCCCCCCCCCCCEEEHHHHHHEE
MDKSKNEEIGLFSETIGELKVDFDFFCKYIAYARQKTPKFTKESKEVIHDFYLNLRKTSV
EECCCCCCCCHHHHHHHHEEECHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
QITARQLEALVRLSEAHAKVRLKSEVEPEDAKFAIYLMIESLKEVAYDHETDSFDIDKIF
HHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEHHHHHHHHHHHCCCCCCCCCHHHHH
GTSRNERSKLNIIFDIIRRSSKVAYGGTVSRGDLLTEAQLEGIPELEVIDLIGKLKVIGD
CCCCCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCHHHHCCCCCHHHHHHHHHHHHHHH
IYEPKIGFYKDARA
HCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]