| Definition | Methanococcus maripaludis S2 chromosome, complete genome. |
|---|---|
| Accession | NC_005791 |
| Length | 1,661,137 |
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The map label for this gene is recG [H]
Identifier: 45358023
GI number: 45358023
Start: 456701
End: 458044
Strand: Direct
Name: recG [H]
Synonym: MMP0460
Alternate gene names: 45358023
Gene position: 456701-458044 (Clockwise)
Preceding gene: 45358022
Following gene: 45358029
Centisome position: 27.49
GC content: 30.58
Gene sequence:
>1344_bases GTGACCAAACTTACAAAAAAACAAGTAACTGATTTAATAAATACTGGGGAAGGTTATACTTTAGAATTTAAAGAATCGCT TAATGCATCATTAGCTAAAGAAATATGTGCTTTTGCGAATTCTGATGGTGGCCATATTTTATTGGGTGTCACTGATTCAG GCGATATAACTGGATATCCATTGAGTAATCAAGACGATGCAAGAATAACGGATATCGCTCGAAACATGGACCCTAGTTTT TCAGTAAATCTTGAAAAAGTAGATAATGTTGTAGTAATAACTGTACCAAAAGGCGAAAATAAGCCCTATTCTACTGGCGG ATTATATTATGTTAGGAATGGATCACAATCTCAAAAATTAAAACGTGAAGAAGTAATTGAACTTTTTAAATACAATGGAT TAATCTCTTTTGAAGAAATACCAAATAAAGAATTTGATTTAAAGAAAGATCTTAATAATTCAGCGCTTAATAATTTTATA ACTGCGTCTGGAATTACAAATAAGTTAAAAAAAGAAGATTTATTGAATAATTTATATCTATTAAAAGATGGATTTCTTAA AAATGCTGGTGTGTTATATTTTTGTAATAATTCCACTAAATTTTTTAGAAATGCACATATAACTTGTGTACTCTACGAAG GCACCAGTAAATCAAATATTTTAGATAGAAAGGATTTTTCAAAAGATATTTATTCCAATTTTAATGATTCATTTGATTAC ATCTGTTCAAAACTTAATACGGAATATATAATTGGCAAAGAGCGAGTTGAAAGACTGGAACTTCCAAAAGAGGCCATTAG GGAAGCTTTGGTAAATTCTATTGCCCATAGAGATTATTTTTCTTCAGGCCATATTCAGGTAGATATATTCCAGGATAAAC TTGAAATTTCAAATCCAGGGGGACTAGTTTTAGGTCTTTCATATTCTGAACTTGGTAAAAGAAGTATTCCTCGTAATCCT TTACTTGCAGATTTAATGCTTAGATCAAAACTTGTTGAAAGGGTGGGTTCTGGAATAATTCGGATTAGGGAATCCATGGA AAGCTACGGGTTAAACTGTGAATTTAATGTTTCTGAAAATTATTTTTCAACAGTATTGGGGCGTAAAAAAGGCTTTAAAT TCCCAGTTAGTTTTTCAAGCACTAATGCAGTTAGCAGATCCGATAAAATTATTGCATTAATAATGGAAAATCCAGAAATA ACAATTTTAGAAATTAGTAAGTTACTTAATTTAAGTCATAGTACTGTTAGAAATGAAATAAAAGTATTAAAAGAAAACGG AATAGTTAAACGAGTAGGTCCTACAAAGGGGGGCCATTGGGAAGTAGTTGATACTAAGAAGTAA
Upstream 100 bases:
>100_bases AAGATAAATTAATTTTTAGGACCTATTTTTTCAATTTTCACATGGAAACCTATTAAAAAATGAAATAACAATTAAGATAT ATTGACAAATAGGGGATACT
Downstream 100 bases:
>100_bases CTTAGAAATACCTTAGAAATACCTTAGAAATACCTTAGAAATACCTTAGAAATACCTTAGAAATACCTTAGAAATACCTT AGAAATACCTTAGATTAACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MTKLTKKQVTDLINTGEGYTLEFKESLNASLAKEICAFANSDGGHILLGVTDSGDITGYPLSNQDDARITDIARNMDPSF SVNLEKVDNVVVITVPKGENKPYSTGGLYYVRNGSQSQKLKREEVIELFKYNGLISFEEIPNKEFDLKKDLNNSALNNFI TASGITNKLKKEDLLNNLYLLKDGFLKNAGVLYFCNNSTKFFRNAHITCVLYEGTSKSNILDRKDFSKDIYSNFNDSFDY ICSKLNTEYIIGKERVERLELPKEAIREALVNSIAHRDYFSSGHIQVDIFQDKLEISNPGGLVLGLSYSELGKRSIPRNP LLADLMLRSKLVERVGSGIIRIRESMESYGLNCEFNVSENYFSTVLGRKKGFKFPVSFSSTNAVSRSDKIIALIMENPEI TILEISKLLNLSHSTVRNEIKVLKENGIVKRVGPTKGGHWEVVDTKK
Sequences:
>Translated_447_residues MTKLTKKQVTDLINTGEGYTLEFKESLNASLAKEICAFANSDGGHILLGVTDSGDITGYPLSNQDDARITDIARNMDPSF SVNLEKVDNVVVITVPKGENKPYSTGGLYYVRNGSQSQKLKREEVIELFKYNGLISFEEIPNKEFDLKKDLNNSALNNFI TASGITNKLKKEDLLNNLYLLKDGFLKNAGVLYFCNNSTKFFRNAHITCVLYEGTSKSNILDRKDFSKDIYSNFNDSFDY ICSKLNTEYIIGKERVERLELPKEAIREALVNSIAHRDYFSSGHIQVDIFQDKLEISNPGGLVLGLSYSELGKRSIPRNP LLADLMLRSKLVERVGSGIIRIRESMESYGLNCEFNVSENYFSTVLGRKKGFKFPVSFSSTNAVSRSDKIIALIMENPEI TILEISKLLNLSHSTVRNEIKVLKENGIVKRVGPTKGGHWEVVDTKK >Mature_446_residues TKLTKKQVTDLINTGEGYTLEFKESLNASLAKEICAFANSDGGHILLGVTDSGDITGYPLSNQDDARITDIARNMDPSFS VNLEKVDNVVVITVPKGENKPYSTGGLYYVRNGSQSQKLKREEVIELFKYNGLISFEEIPNKEFDLKKDLNNSALNNFIT ASGITNKLKKEDLLNNLYLLKDGFLKNAGVLYFCNNSTKFFRNAHITCVLYEGTSKSNILDRKDFSKDIYSNFNDSFDYI CSKLNTEYIIGKERVERLELPKEAIREALVNSIAHRDYFSSGHIQVDIFQDKLEISNPGGLVLGLSYSELGKRSIPRNPL LADLMLRSKLVERVGSGIIRIRESMESYGLNCEFNVSENYFSTVLGRKKGFKFPVSFSSTNAVSRSDKIIALIMENPEIT ILEISKLLNLSHSTVRNEIKVLKENGIVKRVGPTKGGHWEVVDTKK
Specific function: Critical role in recombination and DNA repair. Help process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3' to 5' polarity. RecG unwind branched dup
COG id: COG2865
COG function: function code K; Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase ATP-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR014021 - InterPro: IPR016027 - InterPro: IPR004365 [H]
Pfam domain/function: PF00270 DEAD; PF01336 tRNA_anti [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 50199; Mature: 50068
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLTKKQVTDLINTGEGYTLEFKESLNASLAKEICAFANSDGGHILLGVTDSGDITGYP CCCCCHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHHHCCCCCCEEEEEEECCCCEECCC LSNQDDARITDIARNMDPSFSVNLEKVDNVVVITVPKGENKPYSTGGLYYVRNGSQSQKL CCCCCCCHHHHHHHCCCCCCEEEHHHHCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHH KREEVIELFKYNGLISFEEIPNKEFDLKKDLNNSALNNFITASGITNKLKKEDLLNNLYL HHHHHHHHHHHCCEEEHHHCCCCCCCHHHCCCHHHHHHEEECCCHHHHHHHHHHHHCEEE LKDGFLKNAGVLYFCNNSTKFFRNAHITCVLYEGTSKSNILDRKDFSKDIYSNFNDSFDY EECCCCCCCCEEEEECCCCEEEECCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHH ICSKLNTEYIIGKERVERLELPKEAIREALVNSIAHRDYFSSGHIQVDIFQDKLEISNPG HHHHCCCEEEECHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECEEEECCCC GLVLGLSYSELGKRSIPRNPLLADLMLRSKLVERVGSGIIRIRESMESYGLNCEFNVSEN CEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCHH YFSTVLGRKKGFKFPVSFSSTNAVSRSDKIIALIMENPEITILEISKLLNLSHSTVRNEI HHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEHHHHHCCHHHHHHHHH KVLKENGIVKRVGPTKGGHWEVVDTKK HHHHCCCEEEECCCCCCCEEEEEECCC >Mature Secondary Structure TKLTKKQVTDLINTGEGYTLEFKESLNASLAKEICAFANSDGGHILLGVTDSGDITGYP CCCCHHHHHHHHHCCCCEEEEEHHHCCHHHHHHHHHHCCCCCCEEEEEEECCCCEECCC LSNQDDARITDIARNMDPSFSVNLEKVDNVVVITVPKGENKPYSTGGLYYVRNGSQSQKL CCCCCCCHHHHHHHCCCCCCEEEHHHHCCEEEEEECCCCCCCCCCCCEEEEECCCHHHHH KREEVIELFKYNGLISFEEIPNKEFDLKKDLNNSALNNFITASGITNKLKKEDLLNNLYL HHHHHHHHHHHCCEEEHHHCCCCCCCHHHCCCHHHHHHEEECCCHHHHHHHHHHHHCEEE LKDGFLKNAGVLYFCNNSTKFFRNAHITCVLYEGTSKSNILDRKDFSKDIYSNFNDSFDY EECCCCCCCCEEEEECCCCEEEECCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCHHH ICSKLNTEYIIGKERVERLELPKEAIREALVNSIAHRDYFSSGHIQVDIFQDKLEISNPG HHHHCCCEEEECHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECEEEECCCC GLVLGLSYSELGKRSIPRNPLLADLMLRSKLVERVGSGIIRIRESMESYGLNCEFNVSEN CEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCEEEECCHH YFSTVLGRKKGFKFPVSFSSTNAVSRSDKIIALIMENPEITILEISKLLNLSHSTVRNEI HHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEECCCCEEEEEHHHHHCCHHHHHHHHH KVLKENGIVKRVGPTKGGHWEVVDTKK HHHHCCCEEEECCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9603897 [H]