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The map label for this gene is 45357938

Identifier: 45357938

GI number: 45357938

Start: 371172

End: 372545

Strand: Direct

Name: 45357938

Synonym: MMP0375

Alternate gene names: NA

Gene position: 371172-372545 (Clockwise)

Preceding gene: 45357936

Following gene: 45357944

Centisome position: 22.34

GC content: 32.53

Gene sequence:

>1374_bases
GTGACGAGAAATGCAAATAAGAATAATAAGGAATGCGAAAAGTGTTGGATTTTTGATTTAAATCAATTTAAAATGATTAC
CAATTCAATATTGGAAGAAAATACATTAGTTCTTGAAATAAACCAAAATTATGAAGTAAGCGTTTTAATGGATTACGACG
TGTTTCTTGAAAACGGCATTTTAACTTTCAAAGATTTTGTAAATGATAATTCTAAATCTGCTCAGGTGCTTACAGGTTCA
TTAAAAACAGGAATATTGAATAAAATGTCTCAGAGCATTTCAGAAGGACTTTTAAATAAAACTACAAACCGGAGAACTTA
CTATATCACGGAACCAACGCCTTTAATAGGGCACACTGCATTTGGGCTGATTGATCGGGGAACAAACGTAATTCAAGTAA
GGGGGCTTAGTGGCTGTAATATAAATTGTCCATTCTGTTCTGTTGATGAAGGAATTCACTCAAAATCAAGAAAAAACGAC
TACTATGTTGATAAGGATTATTTAGTTTCGGAATACGAAAAAATTGCAGATTTTAAAGGGTATAAAAAGCTTGAAGCACA
CCTCGACGGACAGGGGGAGCCTTCTCTCTATTATCCCCTTCCAGACTTAGTCCAAAATTTAAACGAGATAAATTCAAAAA
ACAATGGAATAGTTTCAATTCAAACAAACGGAGTTCATTTAACCGAAAAACTGATCGATGATTTAGAAGTTGCAGGACTT
CACAGAATTAATCTTTCAATCAATGCAATGGATGAAAAATTTTCAAAAGGGCTTTCAGGAAGCAAAAATTACGATATTGA
AAAAATTATGAAAATTGCAGAGTACATAAAAAATTCAAAAATTCACCTGTTAATTGCACCACTTCTACTTCCAAATTACA
ATGACGAGGAATTTAAAAAAGTTCTCGATTTTGCAGTTGAATTGGAGCAAAAAAATCCACAAAATACAATAAATCCAATA
ACAAACAAGAAAAATCCGATTGTAGGTCCACAATTATGTTTAACTTACCAATTTGGAAGAAAAATTCCAAAAATGAGAGT
TTGGGATTTTCCAAAGTTTTACAATCTTTTGGATGTTTATCATAAAGAATATCTTAAAGATGGAATAAACGTGGATTTAG
AGGTTCCCTTGCACGGATTTTTCGGAAGCCACGGCAGGAAAAGACTCCCATGTCCTTTTAAATTAAATGAAACGATTTCA
GTAACTGTTTTAATGGATGGACGGGTTAATGGCGAAGTTATCGGTGCATCAAAAAACAGGGTAATCCAGATAATCGACTG
TAAAACTGACATAAATAAATTAATTGGAAAAAGGGTAAAAGTAAAAGTTCTCCGTGTAAAAGACAACGTTATTGTTGGTT
CAATGGTAAAATAG

Upstream 100 bases:

>100_bases
CGAGTATTTTTATCATAAAATCACTTTTTAACTAATTAAATATAGTTATATTATATGGATACTTACTATTTTTACATATT
TAAAAATCTCCGGTGTAAAT

Downstream 100 bases:

>100_bases
GTCCTGAAATTTTCAAAGGAATGGAAAAAATAAAGCAACTCTCAGTAACCCTGTATTCATCATTTCTTTAATTTGCAACT
AATACAACAAATTAGAGTCA

Product: radical SAM domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 456

Protein sequence:

>457_residues
MTRNANKNNKECEKCWIFDLNQFKMITNSILEENTLVLEINQNYEVSVLMDYDVFLENGILTFKDFVNDNSKSAQVLTGS
LKTGILNKMSQSISEGLLNKTTNRRTYYITEPTPLIGHTAFGLIDRGTNVIQVRGLSGCNINCPFCSVDEGIHSKSRKND
YYVDKDYLVSEYEKIADFKGYKKLEAHLDGQGEPSLYYPLPDLVQNLNEINSKNNGIVSIQTNGVHLTEKLIDDLEVAGL
HRINLSINAMDEKFSKGLSGSKNYDIEKIMKIAEYIKNSKIHLLIAPLLLPNYNDEEFKKVLDFAVELEQKNPQNTINPI
TNKKNPIVGPQLCLTYQFGRKIPKMRVWDFPKFYNLLDVYHKEYLKDGINVDLEVPLHGFFGSHGRKRLPCPFKLNETIS
VTVLMDGRVNGEVIGASKNRVIQIIDCKTDINKLIGKRVKVKVLRVKDNVIVGSMVK

Sequences:

>Translated_457_residues
MTRNANKNNKECEKCWIFDLNQFKMITNSILEENTLVLEINQNYEVSVLMDYDVFLENGILTFKDFVNDNSKSAQVLTGS
LKTGILNKMSQSISEGLLNKTTNRRTYYITEPTPLIGHTAFGLIDRGTNVIQVRGLSGCNINCPFCSVDEGIHSKSRKND
YYVDKDYLVSEYEKIADFKGYKKLEAHLDGQGEPSLYYPLPDLVQNLNEINSKNNGIVSIQTNGVHLTEKLIDDLEVAGL
HRINLSINAMDEKFSKGLSGSKNYDIEKIMKIAEYIKNSKIHLLIAPLLLPNYNDEEFKKVLDFAVELEQKNPQNTINPI
TNKKNPIVGPQLCLTYQFGRKIPKMRVWDFPKFYNLLDVYHKEYLKDGINVDLEVPLHGFFGSHGRKRLPCPFKLNETIS
VTVLMDGRVNGEVIGASKNRVIQIIDCKTDINKLIGKRVKVKVLRVKDNVIVGSMVK
>Mature_456_residues
TRNANKNNKECEKCWIFDLNQFKMITNSILEENTLVLEINQNYEVSVLMDYDVFLENGILTFKDFVNDNSKSAQVLTGSL
KTGILNKMSQSISEGLLNKTTNRRTYYITEPTPLIGHTAFGLIDRGTNVIQVRGLSGCNINCPFCSVDEGIHSKSRKNDY
YVDKDYLVSEYEKIADFKGYKKLEAHLDGQGEPSLYYPLPDLVQNLNEINSKNNGIVSIQTNGVHLTEKLIDDLEVAGLH
RINLSINAMDEKFSKGLSGSKNYDIEKIMKIAEYIKNSKIHLLIAPLLLPNYNDEEFKKVLDFAVELEQKNPQNTINPIT
NKKNPIVGPQLCLTYQFGRKIPKMRVWDFPKFYNLLDVYHKEYLKDGINVDLEVPLHGFFGSHGRKRLPCPFKLNETISV
TVLMDGRVNGEVIGASKNRVIQIIDCKTDINKLIGKRVKVKVLRVKDNVIVGSMVK

Specific function: Unknown

COG id: COG2100

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR007197
- InterPro:   IPR002792 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 51966; Mature: 51834

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRNANKNNKECEKCWIFDLNQFKMITNSILEENTLVLEINQNYEVSVLMDYDVFLENGI
CCCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCEEEEEECCCEEEEEEEEEEEHHHCCC
LTFKDFVNDNSKSAQVLTGSLKTGILNKMSQSISEGLLNKTTNRRTYYITEPTPLIGHTA
EEEHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHH
FGLIDRGTNVIQVRGLSGCNINCPFCSVDEGIHSKSRKNDYYVDKDYLVSEYEKIADFKG
HHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCC
YKKLEAHLDGQGEPSLYYPLPDLVQNLNEINSKNNGIVSIQTNGVHLTEKLIDDLEVAGL
CHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCCEEEEEECCEEHHHHHHHHHHHCCE
HRINLSINAMDEKFSKGLSGSKNYDIEKIMKIAEYIKNSKIHLLIAPLLLPNYNDEEFKK
EEEEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHH
VLDFAVELEQKNPQNTINPITNKKNPIVGPQLCLTYQFGRKIPKMRVWDFPKFYNLLDVY
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHEEEEHHHCCCCCCEECCCHHHHHHHHHH
HKEYLKDGINVDLEVPLHGFFGSHGRKRLPCPFKLNETISVTVLMDGRVNGEVIGASKNR
HHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEECCCEEEEEEEECCCCCCEEEECCCCC
VIQIIDCKTDINKLIGKRVKVKVLRVKDNVIVGSMVK
EEEEEECCHHHHHHCCCCEEEEEEEEECCEEECCCCC
>Mature Secondary Structure 
TRNANKNNKECEKCWIFDLNQFKMITNSILEENTLVLEINQNYEVSVLMDYDVFLENGI
CCCCCCCCCCCCEEEEEECHHHHHHHHHHHCCCEEEEEECCCEEEEEEEEEEEHHHCCC
LTFKDFVNDNSKSAQVLTGSLKTGILNKMSQSISEGLLNKTTNRRTYYITEPTPLIGHTA
EEEHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHH
FGLIDRGTNVIQVRGLSGCNINCPFCSVDEGIHSKSRKNDYYVDKDYLVSEYEKIADFKG
HHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHHHCCC
YKKLEAHLDGQGEPSLYYPLPDLVQNLNEINSKNNGIVSIQTNGVHLTEKLIDDLEVAGL
CHHHHHHCCCCCCCCEEECCHHHHHHHHHHCCCCCCEEEEEECCEEHHHHHHHHHHHCCE
HRINLSINAMDEKFSKGLSGSKNYDIEKIMKIAEYIKNSKIHLLIAPLLLPNYNDEEFKK
EEEEEEEECCHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHH
VLDFAVELEQKNPQNTINPITNKKNPIVGPQLCLTYQFGRKIPKMRVWDFPKFYNLLDVY
HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHEEEEHHHCCCCCCEECCCHHHHHHHHHH
HKEYLKDGINVDLEVPLHGFFGSHGRKRLPCPFKLNETISVTVLMDGRVNGEVIGASKNR
HHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEECCCEEEEEEEECCCCCCEEEECCCCC
VIQIIDCKTDINKLIGKRVKVKVLRVKDNVIVGSMVK
EEEEEECCHHHHHHCCCCEEEEEEEEECCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]