Click here to switch to the map view.

The map label for this gene is yadS [H]

Identifier: 45357934

GI number: 45357934

Start: 368523

End: 369152

Strand: Direct

Name: yadS [H]

Synonym: MMP0371

Alternate gene names: 45357934

Gene position: 368523-369152 (Clockwise)

Preceding gene: 45357933

Following gene: 45357936

Centisome position: 22.18

GC content: 33.97

Gene sequence:

>630_bases
ATGATTACAGAAAACATATTTTTTATAATGAATATCATCGGACTTTTAGCATTTGCAGTTGTGGGTGCATTAAAAGGAAT
TAAAAAAGGCTTAGATTTACTTGGAATAATAGTTCTTGGGATTATGACTGCACTTGGGGGCGGAATTACAAGAGATTTAC
TTGTAAATACAATTCCTTATGCATTAAGATCTCCAAACGATATGGGTGTTGCATTAATTGGCGTATGGTGTGCAATAGTA
ATTTTCAAGGTTTTTAATGAGGATGTAAGTAACAAATACATCATACAAATTCCTGATGCAGTGGGCCTTTCTGCGTTTAC
AACAACGGGTGCAATGATTGCATATAACTTTGACGTGTCATTTTTTGGAATAATTATACTTGCAACGTTAACTGGTGTTG
GTGGGGGAATAATAAGCGACATATTGTTACAAAAAACACCTTCTGCATTAACTGAAGACTTTTATGCGAGCTGTTCGATA
ATTGGGGCAATTGCATTTTATCTGGCAATTCTTTCGAATTTAAGTCTTGAGATGAGTGCAGTTATTTGTAGTATCGTTGT
TTTAATGATTAGAATTGTTGCAATTCTTTGTAAATGGAGCCTTCCAAAATTTTACAGCGAACAAAAATAG

Upstream 100 bases:

>100_bases
TTTCAATCTCATCAAGTGCGGAGTTTAATTTCACGTACATTAAAAATATATAACTGCAATGCTTTGAGTGTATTTATCAT
TTAAAACACGTGGAAAAAAC

Downstream 100 bases:

>100_bases
AATCTATAAAACATCTAAATTTTTTTTAAAAATCAAAAAAAGAGAAATGGTTTGGTAAATATTTAATTTTGATGCAAATT
TATTCTGGTTTTTCCATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MITENIFFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYALRSPNDMGVALIGVWCAIV
IFKVFNEDVSNKYIIQIPDAVGLSAFTTTGAMIAYNFDVSFFGIIILATLTGVGGGIISDILLQKTPSALTEDFYASCSI
IGAIAFYLAILSNLSLEMSAVICSIVVLMIRIVAILCKWSLPKFYSEQK

Sequences:

>Translated_209_residues
MITENIFFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYALRSPNDMGVALIGVWCAIV
IFKVFNEDVSNKYIIQIPDAVGLSAFTTTGAMIAYNFDVSFFGIIILATLTGVGGGIISDILLQKTPSALTEDFYASCSI
IGAIAFYLAILSNLSLEMSAVICSIVVLMIRIVAILCKWSLPKFYSEQK
>Mature_209_residues
MITENIFFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPYALRSPNDMGVALIGVWCAIV
IFKVFNEDVSNKYIIQIPDAVGLSAFTTTGAMIAYNFDVSFFGIIILATLTGVGGGIISDILLQKTPSALTEDFYASCSI
IGAIAFYLAILSNLSLEMSAVICSIVVLMIRIVAILCKWSLPKFYSEQK

Specific function: Unknown

COG id: COG2860

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0126 family [H]

Homologues:

Organism=Escherichia coli, GI1786352, Length=204, Percent_Identity=32.3529411764706, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI87082304, Length=183, Percent_Identity=26.775956284153, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005115 [H]

Pfam domain/function: PF03458 UPF0126 [H]

EC number: NA

Molecular weight: Translated: 22353; Mature: 22353

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITENIFFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ALRSPNDMGVALIGVWCAIVIFKVFNEDVSNKYIIQIPDAVGLSAFTTTGAMIAYNFDVS
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCEEEEEECCHH
FFGIIILATLTGVGGGIISDILLQKTPSALTEDFYASCSIIGAIAFYLAILSNLSLEMSA
HHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VICSIVVLMIRIVAILCKWSLPKFYSEQK
HHHHHHHHHHHHHHHHHHCCCCHHCCCCC
>Mature Secondary Structure
MITENIFFIMNIIGLLAFAVVGALKGIKKGLDLLGIIVLGIMTALGGGITRDLLVNTIPY
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
ALRSPNDMGVALIGVWCAIVIFKVFNEDVSNKYIIQIPDAVGLSAFTTTGAMIAYNFDVS
HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHCCEEEEEECCHH
FFGIIILATLTGVGGGIISDILLQKTPSALTEDFYASCSIIGAIAFYLAILSNLSLEMSA
HHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
VICSIVVLMIRIVAILCKWSLPKFYSEQK
HHHHHHHHHHHHHHHHHHCCCCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA