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The map label for this gene is 45357870

Identifier: 45357870

GI number: 45357870

Start: 305126

End: 305815

Strand: Direct

Name: 45357870

Synonym: MMP0307

Alternate gene names: NA

Gene position: 305126-305815 (Clockwise)

Preceding gene: 45357865

Following gene: 45357871

Centisome position: 18.37

GC content: 27.54

Gene sequence:

>690_bases
ATGAATGACGACATATATGATGAAATGGTTCGAGAAAGGGGACGCGAATATTTTTTAAAAAACATGGTAAAATACTGTGT
AAAACGAGGGAATACCCTTCATGGAACGGTTTATGGTAGTGATAAGTATATAACAAAGGTGGATTTAAAAACAAAAACTG
GAATTTGTACTTGTCCTTATCAATACAACTGTAAACACGCATATGCTCTTTTAGAGTCATATAAATCTGGAAAATATGTC
GATGGGGATGAATTATTTTTAAATTTTTCAAAACTTGATAAATTGGAAATTTTAAAAATTTTTGAAAGTATCATTGAAAA
ACACAATTTATGGGATGAATTTATAACGGAGGATAAAACCCTTCTTGATACTGCAAAAAACATGTTAGAACTTACAAAAA
TAGAAAAAAAGAATGTATTTACATTTACTTCGTTTTTAAGAAATCAATTTTTAAAAAATGCAGGAAATGAAGAACTTCTT
TTGATAATTCCTGATGTAATAAAATATATTCAAGAGCGAAAAAAACTTGAAGAAATATTATTTTTAATAGTCGATGAGCT
TTTTGAGCGAGGAAAAACTGATAAAGATACTTTAAAGAAATTAATCGAACTTTCAAGAAAATATCGTGAATTGTGGATGG
TAAAAGATAACATCCTTGATTATGAGTACTTTGAACTCTTGGAATATTAA

Upstream 100 bases:

>100_bases
CTATCGAAACTTCTTTTTCAAGATTCATATTTTCCCTCCACCAAATACACATATAAATTTGAATTTGAATATATTTAACA
TTGCTAGATTCCGTGATAAC

Downstream 100 bases:

>100_bases
TTTTCAGAATATTTTAAGCTTTATTAGAATAATTAATAAATATATTTATATAATCTGCCTAAAAATATAAATTGTAGCAG
ATTAGCGCTTTGATAAAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 229

Protein sequence:

>229_residues
MNDDIYDEMVRERGREYFLKNMVKYCVKRGNTLHGTVYGSDKYITKVDLKTKTGICTCPYQYNCKHAYALLESYKSGKYV
DGDELFLNFSKLDKLEILKIFESIIEKHNLWDEFITEDKTLLDTAKNMLELTKIEKKNVFTFTSFLRNQFLKNAGNEELL
LIIPDVIKYIQERKKLEEILFLIVDELFERGKTDKDTLKKLIELSRKYRELWMVKDNILDYEYFELLEY

Sequences:

>Translated_229_residues
MNDDIYDEMVRERGREYFLKNMVKYCVKRGNTLHGTVYGSDKYITKVDLKTKTGICTCPYQYNCKHAYALLESYKSGKYV
DGDELFLNFSKLDKLEILKIFESIIEKHNLWDEFITEDKTLLDTAKNMLELTKIEKKNVFTFTSFLRNQFLKNAGNEELL
LIIPDVIKYIQERKKLEEILFLIVDELFERGKTDKDTLKKLIELSRKYRELWMVKDNILDYEYFELLEY
>Mature_229_residues
MNDDIYDEMVRERGREYFLKNMVKYCVKRGNTLHGTVYGSDKYITKVDLKTKTGICTCPYQYNCKHAYALLESYKSGKYV
DGDELFLNFSKLDKLEILKIFESIIEKHNLWDEFITEDKTLLDTAKNMLELTKIEKKNVFTFTSFLRNQFLKNAGNEELL
LIIPDVIKYIQERKKLEEILFLIVDELFERGKTDKDTLKKLIELSRKYRELWMVKDNILDYEYFELLEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SWIM-type zinc finger [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007527 [H]

Pfam domain/function: PF04434 SWIM [H]

EC number: NA

Molecular weight: Translated: 27456; Mature: 27456

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: PS50966 ZF_SWIM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDDIYDEMVRERGREYFLKNMVKYCVKRGNTLHGTVYGSDKYITKVDLKTKTGICTCPY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCCEEECCC
QYNCKHAYALLESYKSGKYVDGDELFLNFSKLDKLEILKIFESIIEKHNLWDEFITEDKT
CCCHHHHHHHHHHHCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHH
LLDTAKNMLELTKIEKKNVFTFTSFLRNQFLKNAGNEELLLIIPDVIKYIQERKKLEEIL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHH
FLIVDELFERGKTDKDTLKKLIELSRKYRELWMVKDNILDYEYFELLEY
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
>Mature Secondary Structure
MNDDIYDEMVRERGREYFLKNMVKYCVKRGNTLHGTVYGSDKYITKVDLKTKTGICTCPY
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCCCEEECCC
QYNCKHAYALLESYKSGKYVDGDELFLNFSKLDKLEILKIFESIIEKHNLWDEFITEDKT
CCCHHHHHHHHHHHCCCCCCCCHHHEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCHH
LLDTAKNMLELTKIEKKNVFTFTSFLRNQFLKNAGNEELLLIIPDVIKYIQERKKLEEIL
HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHHHH
FLIVDELFERGKTDKDTLKKLIELSRKYRELWMVKDNILDYEYFELLEY
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]