Definition Methanococcus maripaludis S2 chromosome, complete genome.
Accession NC_005791
Length 1,661,137

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The map label for this gene is yjeF [C]

Identifier: 45357817

GI number: 45357817

Start: 255837

End: 257360

Strand: Direct

Name: yjeF [C]

Synonym: MMP0254

Alternate gene names: 45357817

Gene position: 255837-257360 (Clockwise)

Preceding gene: 45357815

Following gene: 45357818

Centisome position: 15.4

GC content: 29.66

Gene sequence:

>1524_bases
ATGAAAGACATCAAATGCTTCCAGAAAACAGGAAATATTTTAAAATTTGAAGAGCTAAGAGCAAAACTTAAGATTAATGA
TAAAAACGACGTATCTCCTTTAGAAATAAAGGTGATTGACGAAAATTCAGAGCAGTATGGAATCTCAAAAGAAACATTAA
TGGAAAATGCTGGAAGGGCCGTTTATGAAGAAATTGTTAATTTAAACGTTGATTTTTCAAAAACGTATTTATTCTGTGGT
ACTGGAAATAATGGTGGAGACGGTTTCGTTATTGCAAGACACTTAGCGAATAATTTTGCTACATTTGTCGTATTGATTGG
AAATGAAAGAAAAATAAAAACTTCTGAAACTCAAAGAAACTTTAATACTGTAAAAAATATGGAATTTTTTGGAAATTTGG
ATTATGCGAATATTTTGGACGATGAACGTGCAGTGGAGCTATTAAAAACGATTGAAAAGGAACTTGAAAATAAACAAAAT
GATCATATTTTGATAATTGATGCAATGCTTGGGACAGGAATTACGGGAATTTTAAAAAATCCCTATTCAACAATAGTTGA
TTATTTAAATGTTTTAAAATCTAAGTACTCTAAAAAACTAAAAATGGTTAGTGTAGATATTCAGACCGGAAATTTAAACG
CAGATTTAGAAGTTATACTTCACAAAAGAAAATTTGAAAACAAAAATAAAAATTTTGTTGTTAAAGATATTGGAATTCCA
AAATATATTGAAAATATGGTTGGAAAAGGAGATTTTTATTTATTAAATGAAAGAAAACAAAATTCCCACAAAGGACAGAA
TGGGAACGTGCTGGTTATTGGTGGATCGAAAGAATACCATGGTGCACCGGTTTTTTCAGCTCTTGCAGCATCCAAATTTG
CAGATATCGTGACAGTTGCATCAGTTTCAAACGTTATGAATACAGTTAGTAATTATCCTGAATTAATGCCTTATGAATTA
ACTGGGGATTATATCGTTCAAAATCATGTAGATGAACTATTAGAACTGTCTAAAAATTATGATTGTGTTGTTTTAGGTAG
TGGCATTTCTGTAAATTCAGATACGAAAGAATTCGTAAATTCATACCTCAATGAAACAAATGGAAAAGTAGTTATTGATG
CAGATGCAATAAAGTTGATTGATTATAGTAATTTTAAATTTAAAAATAATTTTATATTTACTCCACACAAAAAAGAATTT
GAATATATCGAAAATTATATCGAAAGTTCAGGATTTAAGTCAACGGTAGTTTTAAAAGGCAGTCTCGATATAATATTCAA
TTCTAATAATATCAAAATGAACATTACTGGAAATCAGGGAATGACTGTAGGGGGAACTGGAGATATATTATGCGGAATTA
TCGGTGCAATTTACGCATGTAATGACGCATTTCCTTCAGCCTGCTGTGGAACTTATATAAATGGATATTGCGGAGATTTA
CTCGAAAAAGAGTACGGATATTATTACAATTCAACGGATATTATCAAAATATTGCCAAAAGCACTTAAAGAACTTTTATA
TTAA

Upstream 100 bases:

>100_bases
ATTAATAATAATTAACAATAGGTAATTACAGTTTAATTTAATATATGTATTTTTCGGATTGAAGGTATGTGATAAATTCA
GTTTTCAGGTGTTGAAGGGT

Downstream 100 bases:

>100_bases
TTAATTTATTGAGGGAACTCATGGAAAATGATGTATTTAAGGCAGATATGCACATACACACCAAATATTCTGGAATGATG
AAATATATGGGACTAAAATT

Product: carbohydrate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MKDIKCFQKTGNILKFEELRAKLKINDKNDVSPLEIKVIDENSEQYGISKETLMENAGRAVYEEIVNLNVDFSKTYLFCG
TGNNGGDGFVIARHLANNFATFVVLIGNERKIKTSETQRNFNTVKNMEFFGNLDYANILDDERAVELLKTIEKELENKQN
DHILIIDAMLGTGITGILKNPYSTIVDYLNVLKSKYSKKLKMVSVDIQTGNLNADLEVILHKRKFENKNKNFVVKDIGIP
KYIENMVGKGDFYLLNERKQNSHKGQNGNVLVIGGSKEYHGAPVFSALAASKFADIVTVASVSNVMNTVSNYPELMPYEL
TGDYIVQNHVDELLELSKNYDCVVLGSGISVNSDTKEFVNSYLNETNGKVVIDADAIKLIDYSNFKFKNNFIFTPHKKEF
EYIENYIESSGFKSTVVLKGSLDIIFNSNNIKMNITGNQGMTVGGTGDILCGIIGAIYACNDAFPSACCGTYINGYCGDL
LEKEYGYYYNSTDIIKILPKALKELLY

Sequences:

>Translated_507_residues
MKDIKCFQKTGNILKFEELRAKLKINDKNDVSPLEIKVIDENSEQYGISKETLMENAGRAVYEEIVNLNVDFSKTYLFCG
TGNNGGDGFVIARHLANNFATFVVLIGNERKIKTSETQRNFNTVKNMEFFGNLDYANILDDERAVELLKTIEKELENKQN
DHILIIDAMLGTGITGILKNPYSTIVDYLNVLKSKYSKKLKMVSVDIQTGNLNADLEVILHKRKFENKNKNFVVKDIGIP
KYIENMVGKGDFYLLNERKQNSHKGQNGNVLVIGGSKEYHGAPVFSALAASKFADIVTVASVSNVMNTVSNYPELMPYEL
TGDYIVQNHVDELLELSKNYDCVVLGSGISVNSDTKEFVNSYLNETNGKVVIDADAIKLIDYSNFKFKNNFIFTPHKKEF
EYIENYIESSGFKSTVVLKGSLDIIFNSNNIKMNITGNQGMTVGGTGDILCGIIGAIYACNDAFPSACCGTYINGYCGDL
LEKEYGYYYNSTDIIKILPKALKELLY
>Mature_507_residues
MKDIKCFQKTGNILKFEELRAKLKINDKNDVSPLEIKVIDENSEQYGISKETLMENAGRAVYEEIVNLNVDFSKTYLFCG
TGNNGGDGFVIARHLANNFATFVVLIGNERKIKTSETQRNFNTVKNMEFFGNLDYANILDDERAVELLKTIEKELENKQN
DHILIIDAMLGTGITGILKNPYSTIVDYLNVLKSKYSKKLKMVSVDIQTGNLNADLEVILHKRKFENKNKNFVVKDIGIP
KYIENMVGKGDFYLLNERKQNSHKGQNGNVLVIGGSKEYHGAPVFSALAASKFADIVTVASVSNVMNTVSNYPELMPYEL
TGDYIVQNHVDELLELSKNYDCVVLGSGISVNSDTKEFVNSYLNETNGKVVIDADAIKLIDYSNFKFKNNFIFTPHKKEF
EYIENYIESSGFKSTVVLKGSLDIIFNSNNIKMNITGNQGMTVGGTGDILCGIIGAIYACNDAFPSACCGTYINGYCGDL
LEKEYGYYYNSTDIIKILPKALKELLY

Specific function: Unknown

COG id: COG0063

COG function: function code G; Predicted sugar kinase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 YjeF N-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI119709830, Length=219, Percent_Identity=27.3972602739726, Blast_Score=72, Evalue=9e-13,
Organism=Escherichia coli, GI1790609, Length=504, Percent_Identity=26.7857142857143, Blast_Score=134, Evalue=1e-32,
Organism=Saccharomyces cerevisiae, GI6322698, Length=240, Percent_Identity=30, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017953
- InterPro:   IPR000631
- InterPro:   IPR004443 [H]

Pfam domain/function: PF01256 Carb_kinase; PF03853 YjeF_N [H]

EC number: NA

Molecular weight: Translated: 56761; Mature: 56761

Theoretical pI: Translated: 5.57; Mature: 5.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDIKCFQKTGNILKFEELRAKLKINDKNDVSPLEIKVIDENSEQYGISKETLMENAGRA
CCCCHHHHHCCCEEEEEHHEEEEEECCCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCHH
VYEEIVNLNVDFSKTYLFCGTGNNGGDGFVIARHLANNFATFVVLIGNERKIKTSETQRN
HHHHHHCCCCEECEEEEEEECCCCCCCCEEEHHHHHCCCEEEEEEECCCCEEECCHHHHH
FNTVKNMEFFGNLDYANILDDERAVELLKTIEKELENKQNDHILIIDAMLGTGITGILKN
HHHHHCHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCHHHHCC
PYSTIVDYLNVLKSKYSKKLKMVSVDIQTGNLNADLEVILHKRKFENKNKNFVVKDIGIP
CHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCHHHEEEHHHCCCCCCCEEEEECCCH
KYIENMVGKGDFYLLNERKQNSHKGQNGNVLVIGGSKEYHGAPVFSALAASKFADIVTVA
HHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
SVSNVMNTVSNYPELMPYELTGDYIVQNHVDELLELSKNYDCVVLGSGISVNSDTKEFVN
HHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHH
SYLNETNGKVVIDADAIKLIDYSNFKFKNNFIFTPHKKEFEYIENYIESSGFKSTVVLKG
HHHHCCCCEEEEECCEEEEEECCCCEEECCEEECCCCHHHHHHHHHHHCCCCCEEEEEEE
SLDIIFNSNNIKMNITGNQGMTVGGTGDILCGIIGAIYACNDAFPSACCGTYINGYCGDL
EEEEEECCCEEEEEEECCCCEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LEKEYGYYYNSTDIIKILPKALKELLY
HHHHCCCEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKDIKCFQKTGNILKFEELRAKLKINDKNDVSPLEIKVIDENSEQYGISKETLMENAGRA
CCCCHHHHHCCCEEEEEHHEEEEEECCCCCCCCEEEEEEECCCCCCCCCHHHHHHHCCHH
VYEEIVNLNVDFSKTYLFCGTGNNGGDGFVIARHLANNFATFVVLIGNERKIKTSETQRN
HHHHHHCCCCEECEEEEEEECCCCCCCCEEEHHHHHCCCEEEEEEECCCCEEECCHHHHH
FNTVKNMEFFGNLDYANILDDERAVELLKTIEKELENKQNDHILIIDAMLGTGITGILKN
HHHHHCHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEHHHCCCHHHHCC
PYSTIVDYLNVLKSKYSKKLKMVSVDIQTGNLNADLEVILHKRKFENKNKNFVVKDIGIP
CHHHHHHHHHHHHHHHHCCEEEEEEEEEECCCCCCHHHEEEHHHCCCCCCCEEEEECCCH
KYIENMVGKGDFYLLNERKQNSHKGQNGNVLVIGGSKEYHGAPVFSALAASKFADIVTVA
HHHHHHCCCCCEEEEECCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
SVSNVMNTVSNYPELMPYELTGDYIVQNHVDELLELSKNYDCVVLGSGISVNSDTKEFVN
HHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHH
SYLNETNGKVVIDADAIKLIDYSNFKFKNNFIFTPHKKEFEYIENYIESSGFKSTVVLKG
HHHHCCCCEEEEECCEEEEEECCCCEEECCEEECCCCHHHHHHHHHHHCCCCCEEEEEEE
SLDIIFNSNNIKMNITGNQGMTVGGTGDILCGIIGAIYACNDAFPSACCGTYINGYCGDL
EEEEEECCCEEEEEEECCCCEEECCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LEKEYGYYYNSTDIIKILPKALKELLY
HHHHCCCEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]