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The map label for this gene is rps19e [H]

Identifier: 45357719

GI number: 45357719

Start: 167490

End: 167915

Strand: Direct

Name: rps19e [H]

Synonym: MMP0156

Alternate gene names: 45357719

Gene position: 167490-167915 (Clockwise)

Preceding gene: 45357718

Following gene: 45357720

Centisome position: 10.08

GC content: 39.2

Gene sequence:

>426_bases
ATGGTAACCGTTTACGATGTACCAGCAAACGATTTAATCGCAAAATTAGCTGAAAAATTGAAAGAAATGGGCGTAGAAGA
GCCTGAATGGACAAACTTCGTTAAAACAGGAGCTCACAAAGAGAGAAGACCTGATGACGGAGATTGGTGGTACGTAAGAT
GTGCTGCAATATTAAGAAAAGTATACATTAACGGCCCTGTTGGTGTTGAAAGATTAAGAAGCGTTTACGGTGGAAGGAAG
AACCGAGGATGCGCTCCTGAAAAATTCGTTAAAGGTAGTGGAAACATTATCAGAACAGCTTTCCAAGCTTTAGAAGCTAA
AGAATTACTTACTAAAGCTGAAAAAGGTGGAAGAATCATTGCACCAAAAGGCCAATCTTTAGTAGACAACACTGCAAAAG
AAGTAGCTGATTCAGTAGCACAATAA

Upstream 100 bases:

>100_bases
GATTTTTAAATATTATTTTTAATGAATCCGTTAATTGTCCAGATTATCCGAATATGAGTTACAAAAGGATGAACTGAACG
TTATTATTAGAGGTGTTTAC

Downstream 100 bases:

>100_bases
GTAATTTTATTGATGAGGGGGTTTGATGAACCCAGAAGAAATAAGGCAAAGAAGATTGCAGGAAATGCAAGCAAAAGCTC
AGGCCCAAGGGGCAGCAAAT

Product: 30S ribosomal protein S19e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 141; Mature: 141

Protein sequence:

>141_residues
MVTVYDVPANDLIAKLAEKLKEMGVEEPEWTNFVKTGAHKERRPDDGDWWYVRCAAILRKVYINGPVGVERLRSVYGGRK
NRGCAPEKFVKGSGNIIRTAFQALEAKELLTKAEKGGRIIAPKGQSLVDNTAKEVADSVAQ

Sequences:

>Translated_141_residues
MVTVYDVPANDLIAKLAEKLKEMGVEEPEWTNFVKTGAHKERRPDDGDWWYVRCAAILRKVYINGPVGVERLRSVYGGRK
NRGCAPEKFVKGSGNIIRTAFQALEAKELLTKAEKGGRIIAPKGQSLVDNTAKEVADSVAQ
>Mature_141_residues
MVTVYDVPANDLIAKLAEKLKEMGVEEPEWTNFVKTGAHKERRPDDGDWWYVRCAAILRKVYINGPVGVERLRSVYGGRK
NRGCAPEKFVKGSGNIIRTAFQALEAKELLTKAEKGGRIIAPKGQSLVDNTAKEVADSVAQ

Specific function: Unknown

COG id: COG2238

COG function: function code J; Ribosomal protein S19E (S16A)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S19e family [H]

Homologues:

Organism=Homo sapiens, GI4506695, Length=136, Percent_Identity=39.7058823529412, Blast_Score=107, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17508697, Length=142, Percent_Identity=37.3239436619718, Blast_Score=95, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6324027, Length=136, Percent_Identity=38.9705882352941, Blast_Score=93, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6324451, Length=136, Percent_Identity=38.9705882352941, Blast_Score=92, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24649452, Length=135, Percent_Identity=40, Blast_Score=106, Evalue=5e-24,
Organism=Drosophila melanogaster, GI17647891, Length=135, Percent_Identity=39.2592592592593, Blast_Score=100, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24642576, Length=135, Percent_Identity=39.2592592592593, Blast_Score=100, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24642574, Length=135, Percent_Identity=39.2592592592593, Blast_Score=100, Evalue=4e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001266
- InterPro:   IPR018277
- InterPro:   IPR011991
- ProDom:   PD003854 [H]

Pfam domain/function: PF01090 Ribosomal_S19e [H]

EC number: NA

Molecular weight: Translated: 15601; Mature: 15601

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTVYDVPANDLIAKLAEKLKEMGVEEPEWTNFVKTGAHKERRPDDGDWWYVRCAAILRK
CEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
VYINGPVGVERLRSVYGGRKNRGCAPEKFVKGSGNIIRTAFQALEAKELLTKAEKGGRII
HHCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
APKGQSLVDNTAKEVADSVAQ
CCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVTVYDVPANDLIAKLAEKLKEMGVEEPEWTNFVKTGAHKERRPDDGDWWYVRCAAILRK
CEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHH
VYINGPVGVERLRSVYGGRKNRGCAPEKFVKGSGNIIRTAFQALEAKELLTKAEKGGRII
HHCCCCCCHHHHHHHHCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEE
APKGQSLVDNTAKEVADSVAQ
CCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]