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The map label for this gene is 45357565

Identifier: 45357565

GI number: 45357565

Start: 10416

End: 11480

Strand: Direct

Name: 45357565

Synonym: MMP0002

Alternate gene names: NA

Gene position: 10416-11480 (Clockwise)

Preceding gene: 45357564

Following gene: 45357569

Centisome position: 0.63

GC content: 33.33

Gene sequence:

>1065_bases
ATGGACAGTCTTTTGGAATTAAACCGGGTAAATACAGCAAGAGAAATAATAAGAAAAAAAATACAAAATACTGGAAGAAA
CAGTATTTATGATTTAACGGGTCTTTGTGGCGGATTTGAAATCTGTGAAGAAAACCTAAAATTAATAGAAACATATGTTG
GGCCAGCAATATTTTCAGAAAAACTAAATAATGCTGGTTTAAGCCATTTATCAGGAAATTCCAAAATTCATAATGCAGTA
TGTTTTAACAGGACTTCTTCGGCAATATTATCTACAATAATGACCCTATCAAAGTCTTTCGAAAAACTGGTGCATTATGT
TCCTGAAAAACCTGCACACCCCTCAATTCCTAGGAGTTGCAAAATATTTGGAATGGAATACTTTGAAAGTGATTCGTTAG
AAGAAATTCTCTCAAAAATTGATGAAAATTCATTTACTGCAATAACTGGAGCTACCATGGATCACAAGGTAGTTTCTGAA
GAAATTGCATGCAAAATAATAGATTATGCAAAATCTAAAAATTCTCCGGTATTTTTTGATGATGCGTCTGGAGCAAGGTT
GAGAAAATTGTATAAAGAATCACCAGCTCTTGAAATGGGTGCAGATTTAGTTGTAACCAGCATGGACAAATTAATGGACG
GCCCAAGAGCCGGCCTTCTTGCAGGGGACAAAAACTTAGTTGACAAAATATATTCTGAAGGTTTAAAATTTGGACTTGAA
GCGCAAGCCCCAATAATGGCCGCAGTTGTAACTGCTCTTGAAAGGTTTGATCTAAATAATTTAAAAGATGCATTTGAACG
TGCAGAAAAAGTTGATTTGTCAGTATTTGAAGCTGAAAAAATTGAGTATAAAAAAACTCCGACAGGATTTATAATAAAAA
ATTCATCAGAAGAAAAATTAATTGAAACTGCACTAAAATTGCTTGAAAATTACGGAATAGTTACAATCACTGCGGCAGGT
ATGCCCGGTGCAAGTAAAAACATAAGAATAGACTTCTGTTCAAAAGATGCAGAACGAATTTCGGATGAATATGTAATAAA
TGCAGTTTTAAATTCTTTAAAATAA

Upstream 100 bases:

>100_bases
AAGAATAACTAATGAAGATATTGATCTTGAAGCCGCTGAAAACGGATGCGGATGTTCAGGGGCAGGTTAATTAGTATAAT
TTAAGTATCAAGGTGCAGTT

Downstream 100 bases:

>100_bases
AGTAATAAAAAAATAAAATAACTTTTTTCAAATTTTTTAAATTAATTCTTTTAAGTCTTCGGGCCTATGGAGTTCTCCAC
CAATTTTTCCACAACCGACT

Product: L-seryl-tRNA selenium transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MDSLLELNRVNTAREIIRKKIQNTGRNSIYDLTGLCGGFEICEENLKLIETYVGPAIFSEKLNNAGLSHLSGNSKIHNAV
CFNRTSSAILSTIMTLSKSFEKLVHYVPEKPAHPSIPRSCKIFGMEYFESDSLEEILSKIDENSFTAITGATMDHKVVSE
EIACKIIDYAKSKNSPVFFDDASGARLRKLYKESPALEMGADLVVTSMDKLMDGPRAGLLAGDKNLVDKIYSEGLKFGLE
AQAPIMAAVVTALERFDLNNLKDAFERAEKVDLSVFEAEKIEYKKTPTGFIIKNSSEEKLIETALKLLENYGIVTITAAG
MPGASKNIRIDFCSKDAERISDEYVINAVLNSLK

Sequences:

>Translated_354_residues
MDSLLELNRVNTAREIIRKKIQNTGRNSIYDLTGLCGGFEICEENLKLIETYVGPAIFSEKLNNAGLSHLSGNSKIHNAV
CFNRTSSAILSTIMTLSKSFEKLVHYVPEKPAHPSIPRSCKIFGMEYFESDSLEEILSKIDENSFTAITGATMDHKVVSE
EIACKIIDYAKSKNSPVFFDDASGARLRKLYKESPALEMGADLVVTSMDKLMDGPRAGLLAGDKNLVDKIYSEGLKFGLE
AQAPIMAAVVTALERFDLNNLKDAFERAEKVDLSVFEAEKIEYKKTPTGFIIKNSSEEKLIETALKLLENYGIVTITAAG
MPGASKNIRIDFCSKDAERISDEYVINAVLNSLK
>Mature_354_residues
MDSLLELNRVNTAREIIRKKIQNTGRNSIYDLTGLCGGFEICEENLKLIETYVGPAIFSEKLNNAGLSHLSGNSKIHNAV
CFNRTSSAILSTIMTLSKSFEKLVHYVPEKPAHPSIPRSCKIFGMEYFESDSLEEILSKIDENSFTAITGATMDHKVVSE
EIACKIIDYAKSKNSPVFFDDASGARLRKLYKESPALEMGADLVVTSMDKLMDGPRAGLLAGDKNLVDKIYSEGLKFGLE
AQAPIMAAVVTALERFDLNNLKDAFERAEKVDLSVFEAEKIEYKKTPTGFIIKNSSEEKLIETALKLLENYGIVTITAAG
MPGASKNIRIDFCSKDAERISDEYVINAVLNSLK

Specific function: Unknown

COG id: COG1921

COG function: function code E; Selenocysteine synthase [seryl-tRNASer selenium transferase]

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0425 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y002_METMP (Q6M1B4)

Other databases:

- EMBL:   BX950229
- RefSeq:   NP_987122.1
- HSSP:   Q57622
- ProteinModelPortal:   Q6M1B4
- SMR:   Q6M1B4
- GeneID:   2761917
- GenomeReviews:   BX950229_GR
- KEGG:   mmp:MMP0002
- NMPDR:   fig|267377.1.peg.2
- HOGENOM:   HBG540973
- OMA:   KFGLEAQ
- ProtClustDB:   CLSK876091
- BioCyc:   MMAR267377:MMP0002-MONOMER
- InterPro:   IPR020033
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR018319
- Gene3D:   G3DSA:3.40.640.10
- TIGRFAMs:   TIGR03576

Pfam domain/function: PF03841 SelA; SSF53383 PyrdxlP-dep_Trfase_major

EC number: NA

Molecular weight: Translated: 39103; Mature: 39103

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSLLELNRVNTAREIIRKKIQNTGRNSIYDLTGLCGGFEICEENLKLIETYVGPAIFSE
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
KLNNAGLSHLSGNSKIHNAVCFNRTSSAILSTIMTLSKSFEKLVHYVPEKPAHPSIPRSC
HHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
KIFGMEYFESDSLEEILSKIDENSFTAITGATMDHKVVSEEIACKIIDYAKSKNSPVFFD
EEECHHHHCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEE
DASGARLRKLYKESPALEMGADLVVTSMDKLMDGPRAGLLAGDKNLVDKIYSEGLKFGLE
CCCCHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC
AQAPIMAAVVTALERFDLNNLKDAFERAEKVDLSVFEAEKIEYKKTPTGFIIKNSSEEKL
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEECCCHHHH
IETALKLLENYGIVTITAAGMPGASKNIRIDFCSKDAERISDEYVINAVLNSLK
HHHHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDSLLELNRVNTAREIIRKKIQNTGRNSIYDLTGLCGGFEICEENLKLIETYVGPAIFSE
CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHH
KLNNAGLSHLSGNSKIHNAVCFNRTSSAILSTIMTLSKSFEKLVHYVPEKPAHPSIPRSC
HHHCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
KIFGMEYFESDSLEEILSKIDENSFTAITGATMDHKVVSEEIACKIIDYAKSKNSPVFFD
EEECHHHHCCCCHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEE
DASGARLRKLYKESPALEMGADLVVTSMDKLMDGPRAGLLAGDKNLVDKIYSEGLKFGLE
CCCCHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC
AQAPIMAAVVTALERFDLNNLKDAFERAEKVDLSVFEAEKIEYKKTPTGFIIKNSSEEKL
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEECCCHHHH
IETALKLLENYGIVTITAAGMPGASKNIRIDFCSKDAERISDEYVINAVLNSLK
HHHHHHHHHCCCEEEEEECCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA