| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42523525
Identifier: 42523525
GI number: 42523525
Start: 1957974
End: 1958675
Strand: Direct
Name: 42523525
Synonym: Bd2052
Alternate gene names: NA
Gene position: 1957974-1958675 (Clockwise)
Preceding gene: 42523516
Following gene: 42523527
Centisome position: 51.76
GC content: 48.43
Gene sequence:
>702_bases ATGAAATTGCTTTTGAACGTTCTTCTTCTTTCCACCGTTGGATCGGCTTCCGCAATGGCTTTCGACTCCCAGGCAGTTTG TCAGGATATCGTTGAGAGACGTGGCAGCATCCAGGTCCAGATGATTTCTTCCTCTGATGGCGACAACTGCTATGTCTCCG TCCACAACCGCAAAGCTCAGGGACTGCTTTACCGTGATTATCTTTTCACGGCGGACGGTGAACTGATGATTTTCAACTCT TTGGGATATGGGGATGAGTCCTCGACCACGGGAGCTCGCGAATTCTTCCTGTTCCCAAGAATCAATCCGGTTCCCACTTT TGAATGGAATGATGAAACCCGCCGCCTGATTGTAACGACAGTCAACGGCAACAAGGCTTCTTTCGACTATGAAGACGCCG AACTGGTTGAAATGACCGGGGCTGAAATCAAAAGAGCCGCAGAAATCCGTCCGGACAACCGCGGTGGCGTTGAAATCAAT AAATATCAGGGGCTTAAACTGGACTCCGGCTTTAAATTGGGTTCCGCACCGACAGCCGTTTCCGGAAACAGCTCAGTTTT CACCGATAAAAACGGTAAAACCTGCAGCGTGAAGAATTATGAAATCTTTAAATACACGTCCGACGGGGATGTGCGCTTCA AGTTCTCTGACAACGGACTAAAAAGCTTCCTGAAAAACCGCTGCTCTTCGCTTACTTTCTAA
Upstream 100 bases:
>100_bases AGTACAGATCGAGTCCAGATTCTGTTATTTTCCTTGCCGCTCTGCCTCCCCAGCTGACAGCCTGAATTGGCTGGGTTCTG CTTACAACAAAGAGGTGCAC
Downstream 100 bases:
>100_bases AATACCTCTCTTGATAAAACAAAAAAGCCAGTCCGGGGATCCTGACTGGCTTTTTTATTTTCTATTCTTTCAGCTTCGGA GTGATCTTCAGCTCCAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MKLLLNVLLLSTVGSASAMAFDSQAVCQDIVERRGSIQVQMISSSDGDNCYVSVHNRKAQGLLYRDYLFTADGELMIFNS LGYGDESSTTGAREFFLFPRINPVPTFEWNDETRRLIVTTVNGNKASFDYEDAELVEMTGAEIKRAAEIRPDNRGGVEIN KYQGLKLDSGFKLGSAPTAVSGNSSVFTDKNGKTCSVKNYEIFKYTSDGDVRFKFSDNGLKSFLKNRCSSLTF
Sequences:
>Translated_233_residues MKLLLNVLLLSTVGSASAMAFDSQAVCQDIVERRGSIQVQMISSSDGDNCYVSVHNRKAQGLLYRDYLFTADGELMIFNS LGYGDESSTTGAREFFLFPRINPVPTFEWNDETRRLIVTTVNGNKASFDYEDAELVEMTGAEIKRAAEIRPDNRGGVEIN KYQGLKLDSGFKLGSAPTAVSGNSSVFTDKNGKTCSVKNYEIFKYTSDGDVRFKFSDNGLKSFLKNRCSSLTF >Mature_233_residues MKLLLNVLLLSTVGSASAMAFDSQAVCQDIVERRGSIQVQMISSSDGDNCYVSVHNRKAQGLLYRDYLFTADGELMIFNS LGYGDESSTTGAREFFLFPRINPVPTFEWNDETRRLIVTTVNGNKASFDYEDAELVEMTGAEIKRAAEIRPDNRGGVEIN KYQGLKLDSGFKLGSAPTAVSGNSSVFTDKNGKTCSVKNYEIFKYTSDGDVRFKFSDNGLKSFLKNRCSSLTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25799; Mature: 25799
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLLNVLLLSTVGSASAMAFDSQAVCQDIVERRGSIQVQMISSSDGDNCYVSVHNRKAQ CHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCC GLLYRDYLFTADGELMIFNSLGYGDESSTTGAREFFLFPRINPVPTFEWNDETRRLIVTT CEEEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEE VNGNKASFDYEDAELVEMTGAEIKRAAEIRPDNRGGVEINKYQGLKLDSGFKLGSAPTAV ECCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCEEEEEECCEEECCCCCCCCCCCEE SGNSSVFTDKNGKTCSVKNYEIFKYTSDGDVRFKFSDNGLKSFLKNRCSSLTF CCCCCEEECCCCCEEEECCEEEEEEECCCEEEEEECCCHHHHHHHHHHHCCCC >Mature Secondary Structure MKLLLNVLLLSTVGSASAMAFDSQAVCQDIVERRGSIQVQMISSSDGDNCYVSVHNRKAQ CHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCC GLLYRDYLFTADGELMIFNSLGYGDESSTTGAREFFLFPRINPVPTFEWNDETRRLIVTT CEEEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEE VNGNKASFDYEDAELVEMTGAEIKRAAEIRPDNRGGVEINKYQGLKLDSGFKLGSAPTAV ECCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCEEEEEECCEEECCCCCCCCCCCEE SGNSSVFTDKNGKTCSVKNYEIFKYTSDGDVRFKFSDNGLKSFLKNRCSSLTF CCCCCEEECCCCCEEEECCEEEEEEECCCEEEEEECCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA