Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523525

Identifier: 42523525

GI number: 42523525

Start: 1957974

End: 1958675

Strand: Direct

Name: 42523525

Synonym: Bd2052

Alternate gene names: NA

Gene position: 1957974-1958675 (Clockwise)

Preceding gene: 42523516

Following gene: 42523527

Centisome position: 51.76

GC content: 48.43

Gene sequence:

>702_bases
ATGAAATTGCTTTTGAACGTTCTTCTTCTTTCCACCGTTGGATCGGCTTCCGCAATGGCTTTCGACTCCCAGGCAGTTTG
TCAGGATATCGTTGAGAGACGTGGCAGCATCCAGGTCCAGATGATTTCTTCCTCTGATGGCGACAACTGCTATGTCTCCG
TCCACAACCGCAAAGCTCAGGGACTGCTTTACCGTGATTATCTTTTCACGGCGGACGGTGAACTGATGATTTTCAACTCT
TTGGGATATGGGGATGAGTCCTCGACCACGGGAGCTCGCGAATTCTTCCTGTTCCCAAGAATCAATCCGGTTCCCACTTT
TGAATGGAATGATGAAACCCGCCGCCTGATTGTAACGACAGTCAACGGCAACAAGGCTTCTTTCGACTATGAAGACGCCG
AACTGGTTGAAATGACCGGGGCTGAAATCAAAAGAGCCGCAGAAATCCGTCCGGACAACCGCGGTGGCGTTGAAATCAAT
AAATATCAGGGGCTTAAACTGGACTCCGGCTTTAAATTGGGTTCCGCACCGACAGCCGTTTCCGGAAACAGCTCAGTTTT
CACCGATAAAAACGGTAAAACCTGCAGCGTGAAGAATTATGAAATCTTTAAATACACGTCCGACGGGGATGTGCGCTTCA
AGTTCTCTGACAACGGACTAAAAAGCTTCCTGAAAAACCGCTGCTCTTCGCTTACTTTCTAA

Upstream 100 bases:

>100_bases
AGTACAGATCGAGTCCAGATTCTGTTATTTTCCTTGCCGCTCTGCCTCCCCAGCTGACAGCCTGAATTGGCTGGGTTCTG
CTTACAACAAAGAGGTGCAC

Downstream 100 bases:

>100_bases
AATACCTCTCTTGATAAAACAAAAAAGCCAGTCCGGGGATCCTGACTGGCTTTTTTATTTTCTATTCTTTCAGCTTCGGA
GTGATCTTCAGCTCCAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 233; Mature: 233

Protein sequence:

>233_residues
MKLLLNVLLLSTVGSASAMAFDSQAVCQDIVERRGSIQVQMISSSDGDNCYVSVHNRKAQGLLYRDYLFTADGELMIFNS
LGYGDESSTTGAREFFLFPRINPVPTFEWNDETRRLIVTTVNGNKASFDYEDAELVEMTGAEIKRAAEIRPDNRGGVEIN
KYQGLKLDSGFKLGSAPTAVSGNSSVFTDKNGKTCSVKNYEIFKYTSDGDVRFKFSDNGLKSFLKNRCSSLTF

Sequences:

>Translated_233_residues
MKLLLNVLLLSTVGSASAMAFDSQAVCQDIVERRGSIQVQMISSSDGDNCYVSVHNRKAQGLLYRDYLFTADGELMIFNS
LGYGDESSTTGAREFFLFPRINPVPTFEWNDETRRLIVTTVNGNKASFDYEDAELVEMTGAEIKRAAEIRPDNRGGVEIN
KYQGLKLDSGFKLGSAPTAVSGNSSVFTDKNGKTCSVKNYEIFKYTSDGDVRFKFSDNGLKSFLKNRCSSLTF
>Mature_233_residues
MKLLLNVLLLSTVGSASAMAFDSQAVCQDIVERRGSIQVQMISSSDGDNCYVSVHNRKAQGLLYRDYLFTADGELMIFNS
LGYGDESSTTGAREFFLFPRINPVPTFEWNDETRRLIVTTVNGNKASFDYEDAELVEMTGAEIKRAAEIRPDNRGGVEIN
KYQGLKLDSGFKLGSAPTAVSGNSSVFTDKNGKTCSVKNYEIFKYTSDGDVRFKFSDNGLKSFLKNRCSSLTF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25799; Mature: 25799

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLLLNVLLLSTVGSASAMAFDSQAVCQDIVERRGSIQVQMISSSDGDNCYVSVHNRKAQ
CHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCC
GLLYRDYLFTADGELMIFNSLGYGDESSTTGAREFFLFPRINPVPTFEWNDETRRLIVTT
CEEEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEE
VNGNKASFDYEDAELVEMTGAEIKRAAEIRPDNRGGVEINKYQGLKLDSGFKLGSAPTAV
ECCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCEEEEEECCEEECCCCCCCCCCCEE
SGNSSVFTDKNGKTCSVKNYEIFKYTSDGDVRFKFSDNGLKSFLKNRCSSLTF
CCCCCEEECCCCCEEEECCEEEEEEECCCEEEEEECCCHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKLLLNVLLLSTVGSASAMAFDSQAVCQDIVERRGSIQVQMISSSDGDNCYVSVHNRKAQ
CHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHCCCCEEEEEEECCCCCEEEEEEECCCCC
GLLYRDYLFTADGELMIFNSLGYGDESSTTGAREFFLFPRINPVPTFEWNDETRRLIVTT
CEEEEEEEEECCCCEEEEECCCCCCCCCCCCCEEEEEECCCCCCCCEEECCCCCEEEEEE
VNGNKASFDYEDAELVEMTGAEIKRAAEIRPDNRGGVEINKYQGLKLDSGFKLGSAPTAV
ECCCCCCCCCCCCCEEECCCHHHHHHHHCCCCCCCCEEEEEECCEEECCCCCCCCCCCEE
SGNSSVFTDKNGKTCSVKNYEIFKYTSDGDVRFKFSDNGLKSFLKNRCSSLTF
CCCCCEEECCCCCEEEECCEEEEEEECCCEEEEEECCCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA