| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42523374
Identifier: 42523374
GI number: 42523374
Start: 1816586
End: 1817053
Strand: Direct
Name: 42523374
Synonym: Bd1895
Alternate gene names: NA
Gene position: 1816586-1817053 (Clockwise)
Preceding gene: 42523373
Following gene: 42523380
Centisome position: 48.02
GC content: 50.21
Gene sequence:
>468_bases ATGCGTGTTCTTGTATTGCCTTTCATCGCTTTGTTTGCTTTTGCGGCCCAGGCCCAGACAATGTCTTTGGATGCCCCTGA ATATGCCAAGCACTTTTGTGTAAAGCAGGGCGATGTGCAGAATCTTGTGGTACCCTCTGTTCGCGCCGTCATCAGAAAGG CCTACACCACCCAAGTCCTTCTGGATGTGCTGGACGCGGATTGCAAAGGCCACAAAGTGATGCCAAAGTCCTCCAATCGT TTTTCCAAACCTTCTTTGATGGACTTCAGTGAGGTGCGCGCGATCGCAGCATCACCTCGTATCTTCCGGGCCAATGAGTT CTCTTATCAGGTAGTTTTGGAGTTCTATTCCGACGTTCTGGCCATGGGCGAGCGCAACTTTCTTTTGAAGCTGTACGCTC ACGATGGCAGTGTTTATCAGATTACTGTGACGACCCGTGATGGGGGAACATTTCTTCAGGCTTACTAG
Upstream 100 bases:
>100_bases TTGCAACGACATTATTACCTGAACCTGCCGAATGGCAGGTTTTTTCTTTATTCGGGTCTGAAACGTGGTTATTCCTCCAT TCACATTCTTGGAGGAAACT
Downstream 100 bases:
>100_bases GTACGGGGCCGCTGTACTCCGGGCTTTCAATAATCCCGGTGTGCAGTTGACCATCGGGGCAGAAGGTCACAGCCCCATTC AGATTGGACAGCAAGACTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MRVLVLPFIALFAFAAQAQTMSLDAPEYAKHFCVKQGDVQNLVVPSVRAVIRKAYTTQVLLDVLDADCKGHKVMPKSSNR FSKPSLMDFSEVRAIAASPRIFRANEFSYQVVLEFYSDVLAMGERNFLLKLYAHDGSVYQITVTTRDGGTFLQAY
Sequences:
>Translated_155_residues MRVLVLPFIALFAFAAQAQTMSLDAPEYAKHFCVKQGDVQNLVVPSVRAVIRKAYTTQVLLDVLDADCKGHKVMPKSSNR FSKPSLMDFSEVRAIAASPRIFRANEFSYQVVLEFYSDVLAMGERNFLLKLYAHDGSVYQITVTTRDGGTFLQAY >Mature_155_residues MRVLVLPFIALFAFAAQAQTMSLDAPEYAKHFCVKQGDVQNLVVPSVRAVIRKAYTTQVLLDVLDADCKGHKVMPKSSNR FSKPSLMDFSEVRAIAASPRIFRANEFSYQVVLEFYSDVLAMGERNFLLKLYAHDGSVYQITVTTRDGGTFLQAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17394; Mature: 17394
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLVLPFIALFAFAAQAQTMSLDAPEYAKHFCVKQGDVQNLVVPSVRAVIRKAYTTQVL CEEEHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH LDVLDADCKGHKVMPKSSNRFSKPSLMDFSEVRAIAASPRIFRANEFSYQVVLEFYSDVL HHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHH AMGERNFLLKLYAHDGSVYQITVTTRDGGTFLQAY HCCCCCEEEEEEECCCCEEEEEEEECCCCEEEEEC >Mature Secondary Structure MRVLVLPFIALFAFAAQAQTMSLDAPEYAKHFCVKQGDVQNLVVPSVRAVIRKAYTTQVL CEEEHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH LDVLDADCKGHKVMPKSSNRFSKPSLMDFSEVRAIAASPRIFRANEFSYQVVLEFYSDVL HHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHH AMGERNFLLKLYAHDGSVYQITVTTRDGGTFLQAY HCCCCCEEEEEEECCCCEEEEEEEECCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA