Click here to switch to the map view.

The map label for this gene is ybhG [C]

Identifier: 42523355

GI number: 42523355

Start: 1800294

End: 1800905

Strand: Direct

Name: ybhG [C]

Synonym: Bd1875

Alternate gene names: 42523355

Gene position: 1800294-1800905 (Clockwise)

Preceding gene: 42523354

Following gene: 42523356

Centisome position: 47.59

GC content: 50.82

Gene sequence:

>612_bases
GTGGATATTCCGGCGCGGGTGTCCTCGGTGATCTCTGATTTTCCGGTGAAAGAGGGACAGATCGTGGCCCAAGGGCAGTC
GGTAGTGACGCTGGACTGTGAAGAGATCCGTCTGGGTTATGATCTGGCCCGCAAAAACTATGACCGGGCTGTGGCACTTT
ATCGCAGTGGCAGTATCGCTCAGGACAGTTACGATCAGATTAAAAATAAAAAAGACGAAATTGAAACCCGTTTCAAGTGG
TGTGAAGTGACTTCCCCCATTAAAGGGACGGTGCTGACCACTTACTTTGAACCCGGGGAAATGGTTTTGCCAGGGGCAAA
ACTTTTGACCGTGGGGGATTTGGATGAAGTTCATGCATACTTCTATCTGCCTCATGACCGCATCGCCCTTCTTAGAATGA
ATCAGAAAGTCACCGCACATCTTCCAGAAATGGATGACAAGGAATTTGAAGGAGTTGTGGCCTATATCAACCCCGAGGCC
GAGTTCACTCCGAAGAATGTGCAAACCCGCGATGAACGGACGCGCCTGGTGTACGCCGTGAAGATTCGTTTTGCAAACAG
CGAAGGCATTCTTAAGCCCGGAATGACCCTGGAGTGGATGGCGGAGGACTGA

Upstream 100 bases:

>100_bases
GCTTCTTATTATCTGCGTTCTTCTGTTACTGGCTTATCTCATCAAAGCTTTTGTTTTTTCCCGTGAGTTTGCGTATGCCG
GCACCGTGGAGGTCACCAAG

Downstream 100 bases:

>100_bases
TGTCTGGCTCCATCTCCATCGAGGTTCGGGATCTCGTTAAAAAGTTGCGCACGACAGAGGCCCTGAAGGGATTGAGCATG
AATTTTTCTGCCGGGGTGAT

Product: HlyD family protein secretion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MDIPARVSSVISDFPVKEGQIVAQGQSVVTLDCEEIRLGYDLARKNYDRAVALYRSGSIAQDSYDQIKNKKDEIETRFKW
CEVTSPIKGTVLTTYFEPGEMVLPGAKLLTVGDLDEVHAYFYLPHDRIALLRMNQKVTAHLPEMDDKEFEGVVAYINPEA
EFTPKNVQTRDERTRLVYAVKIRFANSEGILKPGMTLEWMAED

Sequences:

>Translated_203_residues
MDIPARVSSVISDFPVKEGQIVAQGQSVVTLDCEEIRLGYDLARKNYDRAVALYRSGSIAQDSYDQIKNKKDEIETRFKW
CEVTSPIKGTVLTTYFEPGEMVLPGAKLLTVGDLDEVHAYFYLPHDRIALLRMNQKVTAHLPEMDDKEFEGVVAYINPEA
EFTPKNVQTRDERTRLVYAVKIRFANSEGILKPGMTLEWMAED
>Mature_203_residues
MDIPARVSSVISDFPVKEGQIVAQGQSVVTLDCEEIRLGYDLARKNYDRAVALYRSGSIAQDSYDQIKNKKDEIETRFKW
CEVTSPIKGTVLTTYFEPGEMVLPGAKLLTVGDLDEVHAYFYLPHDRIALLRMNQKVTAHLPEMDDKEFEGVVAYINPEA
EFTPKNVQTRDERTRLVYAVKIRFANSEGILKPGMTLEWMAED

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0194 family [H]

Homologues:

Organism=Escherichia coli, GI1787013, Length=196, Percent_Identity=23.9795918367347, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1789900, Length=104, Percent_Identity=31.7307692307692, Blast_Score=68, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143
- InterPro:   IPR022936 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 23082; Mature: 23082

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIPARVSSVISDFPVKEGQIVAQGQSVVTLDCEEIRLGYDLARKNYDRAVALYRSGSIA
CCCHHHHHHHHHHCCCCCCEEEECCCEEEEEEHHHHHHHHHHHHCCCCEEEEEEECCCCC
QDSYDQIKNKKDEIETRFKWCEVTSPIKGTVLTTYFEPGEMVLPGAKLLTVGDLDEVHAY
CCHHHHHCCCHHHHHHHHEEEEECCCCCCCEEEEEECCCCEEECCCEEEEECCCCCEEEE
FYLPHDRIALLRMNQKVTAHLPEMDDKEFEGVVAYINPEAEFTPKNVQTRDERTRLVYAV
EEECCCCEEEEEECCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEE
KIRFANSEGILKPGMTLEWMAED
EEEEECCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MDIPARVSSVISDFPVKEGQIVAQGQSVVTLDCEEIRLGYDLARKNYDRAVALYRSGSIA
CCCHHHHHHHHHHCCCCCCEEEECCCEEEEEEHHHHHHHHHHHHCCCCEEEEEEECCCCC
QDSYDQIKNKKDEIETRFKWCEVTSPIKGTVLTTYFEPGEMVLPGAKLLTVGDLDEVHAY
CCHHHHHCCCHHHHHHHHEEEEECCCCCCCEEEEEECCCCEEECCCEEEEECCCCCEEEE
FYLPHDRIALLRMNQKVTAHLPEMDDKEFEGVVAYINPEAEFTPKNVQTRDERTRLVYAV
EEECCCCEEEEEECCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEEE
KIRFANSEGILKPGMTLEWMAED
EEEEECCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA