Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523257

Identifier: 42523257

GI number: 42523257

Start: 1700934

End: 1701488

Strand: Direct

Name: 42523257

Synonym: Bd1767

Alternate gene names: NA

Gene position: 1700934-1701488 (Clockwise)

Preceding gene: 42523256

Following gene: 42523258

Centisome position: 44.96

GC content: 54.41

Gene sequence:

>555_bases
TTGAAATCCCGTTCATTCTGGGCTCTGGCATTCCTGAGCGCGGTGGTGCTTTACCGCTTCGTCGATGAATTTCAGAAGGT
GCAGAGTGAGCGGATTCAATCCTGGACGAAAACTCCTTCCGCGGACTGCGCCGTCGTACTTACTGGTGGCGCAGGAAGGG
TGCGGGAGGGGTTTGACCTTCTGGTGAATCAGAACGTCAAGAAGCTGGTGATTTCGGGGGTGTACTCCAATGCGCGCCTG
CGCGAGATCATGCCGGTGTGGCCCTTCTATGGGAATTTGAGCGAGAACGATGTGGTCTTGGACCGCCGTTCTGAGACGAC
CTATGGAAACGCCCAGCAAAGTCTGCCGATTGTTGAGGCCTTGAAGTGCCGGGACATCCTGCTGGTGACTTCCAGACTGC
ACATGTACCGATCTTACCGGACGTTCCGGGCCACCTTCCCGGAAAACATCTATATCGAAAAACATGCGATTATTGGCGGT
CGCTTTGAGTCTTCCGTCTGGGAGTCGGGCTTTGAGGCCCTAAAATCGCTGTTTTACTCCTTCTGGGCCTATTAA

Upstream 100 bases:

>100_bases
TTCACAGACGCTCCTCCGGCGCGTTCGACTGTGGCGGTTGCAGGTTTGCCTAAAGGTGTGAACGTGGAGATCGAAGTCAT
TGCGCATCGCTAAGTCCCTG

Downstream 100 bases:

>100_bases
AACCAGACCTTTGACCAAAACATCTTTTCCAGAATTGATCCGATAAATCCTTGAGAAATCGAGGGTGAATCATGACTTCT
TTACTGGCGCAAATTGACTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MKSRSFWALAFLSAVVLYRFVDEFQKVQSERIQSWTKTPSADCAVVLTGGAGRVREGFDLLVNQNVKKLVISGVYSNARL
REIMPVWPFYGNLSENDVVLDRRSETTYGNAQQSLPIVEALKCRDILLVTSRLHMYRSYRTFRATFPENIYIEKHAIIGG
RFESSVWESGFEALKSLFYSFWAY

Sequences:

>Translated_184_residues
MKSRSFWALAFLSAVVLYRFVDEFQKVQSERIQSWTKTPSADCAVVLTGGAGRVREGFDLLVNQNVKKLVISGVYSNARL
REIMPVWPFYGNLSENDVVLDRRSETTYGNAQQSLPIVEALKCRDILLVTSRLHMYRSYRTFRATFPENIYIEKHAIIGG
RFESSVWESGFEALKSLFYSFWAY
>Mature_184_residues
MKSRSFWALAFLSAVVLYRFVDEFQKVQSERIQSWTKTPSADCAVVLTGGAGRVREGFDLLVNQNVKKLVISGVYSNARL
REIMPVWPFYGNLSENDVVLDRRSETTYGNAQQSLPIVEALKCRDILLVTSRLHMYRSYRTFRATFPENIYIEKHAIIGG
RFESSVWESGFEALKSLFYSFWAY

Specific function: Unknown

COG id: COG1434

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21218; Mature: 21218

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSRSFWALAFLSAVVLYRFVDEFQKVQSERIQSWTKTPSADCAVVLTGGAGRVREGFDL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHH
LVNQNVKKLVISGVYSNARLREIMPVWPFYGNLSENDVVLDRRSETTYGNAQQSLPIVEA
HHCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHCCHHHHH
LKCRDILLVTSRLHMYRSYRTFRATFPENIYIEKHAIIGGRFESSVWESGFEALKSLFYS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHH
FWAY
HHCC
>Mature Secondary Structure
MKSRSFWALAFLSAVVLYRFVDEFQKVQSERIQSWTKTPSADCAVVLTGGAGRVREGFDL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHH
LVNQNVKKLVISGVYSNARLREIMPVWPFYGNLSENDVVLDRRSETTYGNAQQSLPIVEA
HHCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCHHCCHHHHH
LKCRDILLVTSRLHMYRSYRTFRATFPENIYIEKHAIIGGRFESSVWESGFEALKSLFYS
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHH
FWAY
HHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA