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The map label for this gene is pys [H]

Identifier: 42523221

GI number: 42523221

Start: 1661150

End: 1662064

Strand: Direct

Name: pys [H]

Synonym: Bd1725

Alternate gene names: 42523221

Gene position: 1661150-1662064 (Clockwise)

Preceding gene: 42523220

Following gene: 42523222

Centisome position: 43.91

GC content: 51.69

Gene sequence:

>915_bases
ATGACGCTGAACCAGGATCTGGAGCTGCATAAACAGAGCATCCAAAAAGGCTCAAAAAGTTTTGCCCTGGCTTCTTTGTT
TTTTTCAAAGCAACAGAAGCTGGCGGCCTGGAAGCTTTATTCCTGGTGCCGGTACTGTGATGATCAAATCGACGGGGCCG
CGGTGTCGACAGCCCCTCGAAGACTGCAGGAGCTGATTCAGTTGACCCGGTCTTTGCCGCAGGACCCAGCAGCGATGCCG
TTTCAGTTCCGGGGCCTTAGGGATGTTCTTTCCGCGCATCATATTCCCGCACAGTATCCCCTGGATCTGCTTCGTGGGAT
GGAAATGGATGTGCAGAATCGTCGCTACCAGACTTTGCAGGATCTGGAAGAATACTGCTATTGTGTGGCTGGTGTTGTGG
GATTGATGATGTGTCATATTATGGGTGTTCGGTCTGATCAGGCTTTAAGGCATGCCATTGCGATGGGGAATGCCATGCAG
CTGACAAACATATGCCGGGACATACGTGAGGATGCAAATCTTGGGCGTTGTTATTTACCGCAAGAATGGTTGAAACAAGC
CGGGATGACCGAGACCACGTTGTTTCTGCCTGAACATCGCGGGTCTTTGGTAACGATCCAGGAGCGCCTGCTGCAGAGAG
CAGATGAACTTTATGCGGAAGGCTTCGCCGGGTTGCGGTTTTTGTCACTCCGTTCTTGCTGGGCGGTTTTGATTGCGGCT
AAAGTGTATTCATACATTGGTGAGCTGATACGCCGGGATTCTGACCGTGGTTTGACCCGGCGGATTCATGTGAGCTTTTG
GAAAAAGATAGTGTTGATCGGGTCCACGGCAAAGTACTTTGTGCCACAGGTGTGGTGGTCTTTGAAGTCGACAGAGGCTG
TGCGTCCGCCAGCCAGGATTTGGAGTTTGAAGTGA

Upstream 100 bases:

>100_bases
TGTACTTTGTGGGGGCGGGGACACACCCCGGTGCCGGGGTCCCAGGGGTTGTGAACTCTGGTAAAGCCACAGCCGGTTTG
GTTGTTGAGGACCTTGTTTG

Downstream 100 bases:

>100_bases
GTACCAGTTTTGTTAAAGAGACATGGATATATGCCAGCCGGGTTCGCGAATTCAGTCTGAAGGACTGGATCGTGTATGTG
CTTTGGGTCGGAATGATGTA

Product: phytoene synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MTLNQDLELHKQSIQKGSKSFALASLFFSKQQKLAAWKLYSWCRYCDDQIDGAAVSTAPRRLQELIQLTRSLPQDPAAMP
FQFRGLRDVLSAHHIPAQYPLDLLRGMEMDVQNRRYQTLQDLEEYCYCVAGVVGLMMCHIMGVRSDQALRHAIAMGNAMQ
LTNICRDIREDANLGRCYLPQEWLKQAGMTETTLFLPEHRGSLVTIQERLLQRADELYAEGFAGLRFLSLRSCWAVLIAA
KVYSYIGELIRRDSDRGLTRRIHVSFWKKIVLIGSTAKYFVPQVWWSLKSTEAVRPPARIWSLK

Sequences:

>Translated_304_residues
MTLNQDLELHKQSIQKGSKSFALASLFFSKQQKLAAWKLYSWCRYCDDQIDGAAVSTAPRRLQELIQLTRSLPQDPAAMP
FQFRGLRDVLSAHHIPAQYPLDLLRGMEMDVQNRRYQTLQDLEEYCYCVAGVVGLMMCHIMGVRSDQALRHAIAMGNAMQ
LTNICRDIREDANLGRCYLPQEWLKQAGMTETTLFLPEHRGSLVTIQERLLQRADELYAEGFAGLRFLSLRSCWAVLIAA
KVYSYIGELIRRDSDRGLTRRIHVSFWKKIVLIGSTAKYFVPQVWWSLKSTEAVRPPARIWSLK
>Mature_303_residues
TLNQDLELHKQSIQKGSKSFALASLFFSKQQKLAAWKLYSWCRYCDDQIDGAAVSTAPRRLQELIQLTRSLPQDPAAMPF
QFRGLRDVLSAHHIPAQYPLDLLRGMEMDVQNRRYQTLQDLEEYCYCVAGVVGLMMCHIMGVRSDQALRHAIAMGNAMQL
TNICRDIREDANLGRCYLPQEWLKQAGMTETTLFLPEHRGSLVTIQERLLQRADELYAEGFAGLRFLSLRSCWAVLIAAK
VYSYIGELIRRDSDRGLTRRIHVSFWKKIVLIGSTAKYFVPQVWWSLKSTEAVRPPARIWSLK

Specific function: Catalyzes the reaction from prephytoene diphosphate to phytoene [H]

COG id: COG1562

COG function: function code I; Phytoene/squalene synthetase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phytoene/squalene synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002060
- InterPro:   IPR019845
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00494 SQS_PSY [H]

EC number: =2.5.1.32 [H]

Molecular weight: Translated: 34960; Mature: 34829

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS01044 SQUALEN_PHYTOEN_SYN_1 ; PS01045 SQUALEN_PHYTOEN_SYN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNQDLELHKQSIQKGSKSFALASLFFSKQQKLAAWKLYSWCRYCDDQIDGAAVSTAPR
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
RLQELIQLTRSLPQDPAAMPFQFRGLRDVLSAHHIPAQYPLDLLRGMEMDVQNRRYQTLQ
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHH
DLEEYCYCVAGVVGLMMCHIMGVRSDQALRHAIAMGNAMQLTNICRDIREDANLGRCYLP
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
QEWLKQAGMTETTLFLPEHRGSLVTIQERLLQRADELYAEGFAGLRFLSLRSCWAVLIAA
HHHHHHCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVYSYIGELIRRDSDRGLTRRIHVSFWKKIVLIGSTAKYFVPQVWWSLKSTEAVRPPARI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHH
WSLK
CCCC
>Mature Secondary Structure 
TLNQDLELHKQSIQKGSKSFALASLFFSKQQKLAAWKLYSWCRYCDDQIDGAAVSTAPR
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
RLQELIQLTRSLPQDPAAMPFQFRGLRDVLSAHHIPAQYPLDLLRGMEMDVQNRRYQTLQ
HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCHHHHHHHHHH
DLEEYCYCVAGVVGLMMCHIMGVRSDQALRHAIAMGNAMQLTNICRDIREDANLGRCYLP
HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC
QEWLKQAGMTETTLFLPEHRGSLVTIQERLLQRADELYAEGFAGLRFLSLRSCWAVLIAA
HHHHHHCCCCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVYSYIGELIRRDSDRGLTRRIHVSFWKKIVLIGSTAKYFVPQVWWSLKSTEAVRPPARI
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCHHH
WSLK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2254247 [H]