| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42523198
Identifier: 42523198
GI number: 42523198
Start: 1638092
End: 1638919
Strand: Direct
Name: 42523198
Synonym: Bd1701
Alternate gene names: NA
Gene position: 1638092-1638919 (Clockwise)
Preceding gene: 42523197
Following gene: 42523199
Centisome position: 43.3
GC content: 46.01
Gene sequence:
>828_bases ATGTATTTCTTCGGTTCAAAAGACATTAAGTTTTACGTACAAAATTGGATTGAGAATCGAAAGGATTTCTTTGCTGGCAA AGATGTCCTGGATTTGCCAGCCGGGAATGGTGTTTCAGCAAGGCAGCTTCATGCTCTGGGTGCCAACGTCGTTGCCGGCG ACCTGATTCCAGAATTCTTCCGTGTTCCAGAGATCAACTGTGCCTATGTCGACCTCGCCGAAAAACTTCCATATGCAGAT CAAACTTTCGCCTTTATCTTGTGTCAGGAGGGCATAGAACACGTAACCGATCAGCTCCGGGTTCTGGCCGAGTTCGCGCG AGTTCTTAAAAGCCAGGGCACATTATTGGTCACAACTCCCAATTATTCCAATTTGCGGGCTCGAATGTCGTACCTTTTTA ATGAAAGTGAACTCATGGGTAAGATTATGCCACCCAATGAAATCGACAGCGTTTGGTTCAATCCCGATCGCCAAAACAAG ATGTATTTTGGGCATGTGAATCTTATTGGTATCCAAAGACTTAGGCTCTTTGCAAAACTTGCCGGCTTGGAGCTGGTCAA AGTTCATGCGAATCGGGTGAATTATACAGCCCTGATGTTGTTTCCTTTGATTTATCCTTTTGTCTGCTATTTTTCATGGG CGTCGTATCGTCGAATGAAAAGAAAGCAGGGGGCTGATGCCGCAAACCAGGTCCGCGAAGTTTTTGCGTTAGCGCTTTCT CCTGCTATTTTGTTGCAGAATCATTTGCTCGTCGAGTTCGTCAAAACGGCGGAACCCCGCACAGCGGTTGGTAGAAAAAC TAACTTGGCCCATGACTTTGTGACTTAG
Upstream 100 bases:
>100_bases CGGACGATTGCTGGCGAGCGCTAGCGTCACAGTCTTAAGTTGAAATCATATTTCAACTAAACAACAATATAGTTTCATCA ACCTTCATGCGGCTGGAACT
Downstream 100 bases:
>100_bases CGAAATTGTCCTGGTCGTATGTCGAAAAAATAGGTACCTCTTGAGTTTACAAAACAAATAAAGATATATTTATAAGCCAT GATTGGTTTTAAGAATGTAT
Product: putative methyltransferase
Products: NA
Alternate protein names: Methyltransferase Type
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MYFFGSKDIKFYVQNWIENRKDFFAGKDVLDLPAGNGVSARQLHALGANVVAGDLIPEFFRVPEINCAYVDLAEKLPYAD QTFAFILCQEGIEHVTDQLRVLAEFARVLKSQGTLLVTTPNYSNLRARMSYLFNESELMGKIMPPNEIDSVWFNPDRQNK MYFGHVNLIGIQRLRLFAKLAGLELVKVHANRVNYTALMLFPLIYPFVCYFSWASYRRMKRKQGADAANQVREVFALALS PAILLQNHLLVEFVKTAEPRTAVGRKTNLAHDFVT
Sequences:
>Translated_275_residues MYFFGSKDIKFYVQNWIENRKDFFAGKDVLDLPAGNGVSARQLHALGANVVAGDLIPEFFRVPEINCAYVDLAEKLPYAD QTFAFILCQEGIEHVTDQLRVLAEFARVLKSQGTLLVTTPNYSNLRARMSYLFNESELMGKIMPPNEIDSVWFNPDRQNK MYFGHVNLIGIQRLRLFAKLAGLELVKVHANRVNYTALMLFPLIYPFVCYFSWASYRRMKRKQGADAANQVREVFALALS PAILLQNHLLVEFVKTAEPRTAVGRKTNLAHDFVT >Mature_275_residues MYFFGSKDIKFYVQNWIENRKDFFAGKDVLDLPAGNGVSARQLHALGANVVAGDLIPEFFRVPEINCAYVDLAEKLPYAD QTFAFILCQEGIEHVTDQLRVLAEFARVLKSQGTLLVTTPNYSNLRARMSYLFNESELMGKIMPPNEIDSVWFNPDRQNK MYFGHVNLIGIQRLRLFAKLAGLELVKVHANRVNYTALMLFPLIYPFVCYFSWASYRRMKRKQGADAANQVREVFALALS PAILLQNHLLVEFVKTAEPRTAVGRKTNLAHDFVT
Specific function: Unknown
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31378; Mature: 31378
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYFFGSKDIKFYVQNWIENRKDFFAGKDVLDLPAGNGVSARQLHALGANVVAGDLIPEFF CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHH RVPEINCAYVDLAEKLPYADQTFAFILCQEGIEHVTDQLRVLAEFARVLKSQGTLLVTTP CCCCCCCHHEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC NYSNLRARMSYLFNESELMGKIMPPNEIDSVWFNPDRQNKMYFGHVNLIGIQRLRLFAKL CCHHHHHHHHHHHCHHHHHCCCCCCCCCCCCEECCCCCCCEEEEEEEHHHHHHHHHHHHH AGLELVKVHANRVNYTALMLFPLIYPFVCYFSWASYRRMKRKQGADAANQVREVFALALS HCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH PAILLQNHLLVEFVKTAEPRTAVGRKTNLAHDFVT HHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHCCC >Mature Secondary Structure MYFFGSKDIKFYVQNWIENRKDFFAGKDVLDLPAGNGVSARQLHALGANVVAGDLIPEFF CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHH RVPEINCAYVDLAEKLPYADQTFAFILCQEGIEHVTDQLRVLAEFARVLKSQGTLLVTTP CCCCCCCHHEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC NYSNLRARMSYLFNESELMGKIMPPNEIDSVWFNPDRQNKMYFGHVNLIGIQRLRLFAKL CCHHHHHHHHHHHCHHHHHCCCCCCCCCCCCEECCCCCCCEEEEEEEHHHHHHHHHHHHH AGLELVKVHANRVNYTALMLFPLIYPFVCYFSWASYRRMKRKQGADAANQVREVFALALS HCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH PAILLQNHLLVEFVKTAEPRTAVGRKTNLAHDFVT HHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA