Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523198

Identifier: 42523198

GI number: 42523198

Start: 1638092

End: 1638919

Strand: Direct

Name: 42523198

Synonym: Bd1701

Alternate gene names: NA

Gene position: 1638092-1638919 (Clockwise)

Preceding gene: 42523197

Following gene: 42523199

Centisome position: 43.3

GC content: 46.01

Gene sequence:

>828_bases
ATGTATTTCTTCGGTTCAAAAGACATTAAGTTTTACGTACAAAATTGGATTGAGAATCGAAAGGATTTCTTTGCTGGCAA
AGATGTCCTGGATTTGCCAGCCGGGAATGGTGTTTCAGCAAGGCAGCTTCATGCTCTGGGTGCCAACGTCGTTGCCGGCG
ACCTGATTCCAGAATTCTTCCGTGTTCCAGAGATCAACTGTGCCTATGTCGACCTCGCCGAAAAACTTCCATATGCAGAT
CAAACTTTCGCCTTTATCTTGTGTCAGGAGGGCATAGAACACGTAACCGATCAGCTCCGGGTTCTGGCCGAGTTCGCGCG
AGTTCTTAAAAGCCAGGGCACATTATTGGTCACAACTCCCAATTATTCCAATTTGCGGGCTCGAATGTCGTACCTTTTTA
ATGAAAGTGAACTCATGGGTAAGATTATGCCACCCAATGAAATCGACAGCGTTTGGTTCAATCCCGATCGCCAAAACAAG
ATGTATTTTGGGCATGTGAATCTTATTGGTATCCAAAGACTTAGGCTCTTTGCAAAACTTGCCGGCTTGGAGCTGGTCAA
AGTTCATGCGAATCGGGTGAATTATACAGCCCTGATGTTGTTTCCTTTGATTTATCCTTTTGTCTGCTATTTTTCATGGG
CGTCGTATCGTCGAATGAAAAGAAAGCAGGGGGCTGATGCCGCAAACCAGGTCCGCGAAGTTTTTGCGTTAGCGCTTTCT
CCTGCTATTTTGTTGCAGAATCATTTGCTCGTCGAGTTCGTCAAAACGGCGGAACCCCGCACAGCGGTTGGTAGAAAAAC
TAACTTGGCCCATGACTTTGTGACTTAG

Upstream 100 bases:

>100_bases
CGGACGATTGCTGGCGAGCGCTAGCGTCACAGTCTTAAGTTGAAATCATATTTCAACTAAACAACAATATAGTTTCATCA
ACCTTCATGCGGCTGGAACT

Downstream 100 bases:

>100_bases
CGAAATTGTCCTGGTCGTATGTCGAAAAAATAGGTACCTCTTGAGTTTACAAAACAAATAAAGATATATTTATAAGCCAT
GATTGGTTTTAAGAATGTAT

Product: putative methyltransferase

Products: NA

Alternate protein names: Methyltransferase Type

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MYFFGSKDIKFYVQNWIENRKDFFAGKDVLDLPAGNGVSARQLHALGANVVAGDLIPEFFRVPEINCAYVDLAEKLPYAD
QTFAFILCQEGIEHVTDQLRVLAEFARVLKSQGTLLVTTPNYSNLRARMSYLFNESELMGKIMPPNEIDSVWFNPDRQNK
MYFGHVNLIGIQRLRLFAKLAGLELVKVHANRVNYTALMLFPLIYPFVCYFSWASYRRMKRKQGADAANQVREVFALALS
PAILLQNHLLVEFVKTAEPRTAVGRKTNLAHDFVT

Sequences:

>Translated_275_residues
MYFFGSKDIKFYVQNWIENRKDFFAGKDVLDLPAGNGVSARQLHALGANVVAGDLIPEFFRVPEINCAYVDLAEKLPYAD
QTFAFILCQEGIEHVTDQLRVLAEFARVLKSQGTLLVTTPNYSNLRARMSYLFNESELMGKIMPPNEIDSVWFNPDRQNK
MYFGHVNLIGIQRLRLFAKLAGLELVKVHANRVNYTALMLFPLIYPFVCYFSWASYRRMKRKQGADAANQVREVFALALS
PAILLQNHLLVEFVKTAEPRTAVGRKTNLAHDFVT
>Mature_275_residues
MYFFGSKDIKFYVQNWIENRKDFFAGKDVLDLPAGNGVSARQLHALGANVVAGDLIPEFFRVPEINCAYVDLAEKLPYAD
QTFAFILCQEGIEHVTDQLRVLAEFARVLKSQGTLLVTTPNYSNLRARMSYLFNESELMGKIMPPNEIDSVWFNPDRQNK
MYFGHVNLIGIQRLRLFAKLAGLELVKVHANRVNYTALMLFPLIYPFVCYFSWASYRRMKRKQGADAANQVREVFALALS
PAILLQNHLLVEFVKTAEPRTAVGRKTNLAHDFVT

Specific function: Unknown

COG id: COG2227

COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31378; Mature: 31378

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYFFGSKDIKFYVQNWIENRKDFFAGKDVLDLPAGNGVSARQLHALGANVVAGDLIPEFF
CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHH
RVPEINCAYVDLAEKLPYADQTFAFILCQEGIEHVTDQLRVLAEFARVLKSQGTLLVTTP
CCCCCCCHHEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
NYSNLRARMSYLFNESELMGKIMPPNEIDSVWFNPDRQNKMYFGHVNLIGIQRLRLFAKL
CCHHHHHHHHHHHCHHHHHCCCCCCCCCCCCEECCCCCCCEEEEEEEHHHHHHHHHHHHH
AGLELVKVHANRVNYTALMLFPLIYPFVCYFSWASYRRMKRKQGADAANQVREVFALALS
HCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
PAILLQNHLLVEFVKTAEPRTAVGRKTNLAHDFVT
HHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHCCC
>Mature Secondary Structure
MYFFGSKDIKFYVQNWIENRKDFFAGKDVLDLPAGNGVSARQLHALGANVVAGDLIPEFF
CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHCCHHHHHHHHHHHH
RVPEINCAYVDLAEKLPYADQTFAFILCQEGIEHVTDQLRVLAEFARVLKSQGTLLVTTP
CCCCCCCHHEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECC
NYSNLRARMSYLFNESELMGKIMPPNEIDSVWFNPDRQNKMYFGHVNLIGIQRLRLFAKL
CCHHHHHHHHHHHCHHHHHCCCCCCCCCCCCEECCCCCCCEEEEEEEHHHHHHHHHHHHH
AGLELVKVHANRVNYTALMLFPLIYPFVCYFSWASYRRMKRKQGADAANQVREVFALALS
HCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
PAILLQNHLLVEFVKTAEPRTAVGRKTNLAHDFVT
HHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA