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The map label for this gene is epsN [H]

Identifier: 42523177

GI number: 42523177

Start: 1616029

End: 1617177

Strand: Direct

Name: epsN [H]

Synonym: Bd1679

Alternate gene names: 42523177

Gene position: 1616029-1617177 (Clockwise)

Preceding gene: 42523176

Following gene: 42523178

Centisome position: 42.72

GC content: 40.82

Gene sequence:

>1149_bases
ATGTTTAGTGATGTAATCGCTTTTATTCAGGATCTGTACGGTAGTAAGAGTTTTATTCCCTTACATGCTCCTATTTTTAC
GGGGAATGAAAAAAAATATGTAATTGAAGCAATTGACTCCACATATGTCTCATCAGTTGGAGCATTTGTAGATCGCTTTG
AGGTGGATTTTGCGAAATATGTTGGTGCGAAGAAAGCTGTCGTTACTGGAAATGGAACCTCTGCTCTTCATGCTGCTCTA
CATTTATTGGGTGTATCTCGCGGAGATGAAGTCATTACCCAAGCTCTAACATTTGTAGCAACTCCGAATGCGATTTCATA
TTGTGGAGCTAGTCCTGTATTTCTCGATAGTGATGAGTTGACATTAGGGCTTTCAGTAACGTCATTGGCAGAATTTTTAT
TCCAGAATGCCGAGGTAAGAGGGGACTTTTGTTATAACAAAAGAACTGGAAATCGTATAATGGCCTGCATGCCTATGCAT
GTTTTTGGCCATCCGGTTCAAATCAAGGAAATAGTCAAGCTATGTGATGAATATTCAATTCCGGTGATTGAAGATGCTGC
AGAGTCATTAGGTAGTGAGTTCGAAGGACGGCATACGGGGTTATACGGCCGAATTGGGGTGTTTAGTTTTAACGGTAATA
AAATAATTACCTCCGGTGGTGGAGGAATGCTTGTTACTAATGATGTGGATCTAGGTATTCGCGCAAAGCATTTAACTACT
ACAGCAAAAGTGCCGCATGCTTGGGAGTTCTTTCATGATGAAATCGGATTTAATTATAGAATGCCGAACTTAAATGCTGC
ATTGATTGTGGGTCAGTTGGAGCAGCTGCCTAGATTCGTAAGGGATAAACGAGAAACAGCTCAGATTTATAATTCTTATT
TTTCTCATAAGGGTATTGAATTTGTGTGTGAACCTTTTGGGGCGAAGTCCAACTATTGGCTTAATGCCATTCTTTTGAGT
AGTAGATCTGAACGCGATTCGTTTCTGAATGAGACGAATAGAAGTGGTGTTATGACGAGGCCAGTATGGAATTTAATGCC
CGATCTTCCTATGTATCGCACTAATTTGTGCGGTGACATATCTGTGGCACGAATGCTGTCTGATCGGCTCGTAAACATTC
CAAGCAGTGTAAGGCTTCCTCGAGGTTAA

Upstream 100 bases:

>100_bases
GGATTTAGCCCATTAGTTAACATCGAGCAGGGACTGAGAATGACGGTGGATTGGTTTAGTCAACGAGAGAATCTGGCAAA
ATATAAGGCAGATGTCTATA

Downstream 100 bases:

>100_bases
TGGACCTTGGTGAGTTGTTGATTTTACGGGGGATTTGGTGAAAAGACGAATTTGTGTGTTAAGTGGAACGAGGGCAGACT
ACGGCCTGCTCTACTGGCTT

Product: putative aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 382; Mature: 382

Protein sequence:

>382_residues
MFSDVIAFIQDLYGSKSFIPLHAPIFTGNEKKYVIEAIDSTYVSSVGAFVDRFEVDFAKYVGAKKAVVTGNGTSALHAAL
HLLGVSRGDEVITQALTFVATPNAISYCGASPVFLDSDELTLGLSVTSLAEFLFQNAEVRGDFCYNKRTGNRIMACMPMH
VFGHPVQIKEIVKLCDEYSIPVIEDAAESLGSEFEGRHTGLYGRIGVFSFNGNKIITSGGGGMLVTNDVDLGIRAKHLTT
TAKVPHAWEFFHDEIGFNYRMPNLNAALIVGQLEQLPRFVRDKRETAQIYNSYFSHKGIEFVCEPFGAKSNYWLNAILLS
SRSERDSFLNETNRSGVMTRPVWNLMPDLPMYRTNLCGDISVARMLSDRLVNIPSSVRLPRG

Sequences:

>Translated_382_residues
MFSDVIAFIQDLYGSKSFIPLHAPIFTGNEKKYVIEAIDSTYVSSVGAFVDRFEVDFAKYVGAKKAVVTGNGTSALHAAL
HLLGVSRGDEVITQALTFVATPNAISYCGASPVFLDSDELTLGLSVTSLAEFLFQNAEVRGDFCYNKRTGNRIMACMPMH
VFGHPVQIKEIVKLCDEYSIPVIEDAAESLGSEFEGRHTGLYGRIGVFSFNGNKIITSGGGGMLVTNDVDLGIRAKHLTT
TAKVPHAWEFFHDEIGFNYRMPNLNAALIVGQLEQLPRFVRDKRETAQIYNSYFSHKGIEFVCEPFGAKSNYWLNAILLS
SRSERDSFLNETNRSGVMTRPVWNLMPDLPMYRTNLCGDISVARMLSDRLVNIPSSVRLPRG
>Mature_382_residues
MFSDVIAFIQDLYGSKSFIPLHAPIFTGNEKKYVIEAIDSTYVSSVGAFVDRFEVDFAKYVGAKKAVVTGNGTSALHAAL
HLLGVSRGDEVITQALTFVATPNAISYCGASPVFLDSDELTLGLSVTSLAEFLFQNAEVRGDFCYNKRTGNRIMACMPMH
VFGHPVQIKEIVKLCDEYSIPVIEDAAESLGSEFEGRHTGLYGRIGVFSFNGNKIITSGGGGMLVTNDVDLGIRAKHLTT
TAKVPHAWEFFHDEIGFNYRMPNLNAALIVGQLEQLPRFVRDKRETAQIYNSYFSHKGIEFVCEPFGAKSNYWLNAILLS
SRSERDSFLNETNRSGVMTRPVWNLMPDLPMYRTNLCGDISVARMLSDRLVNIPSSVRLPRG

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=280, Percent_Identity=30.7142857142857, Blast_Score=126, Evalue=2e-30,
Organism=Escherichia coli, GI2367285, Length=343, Percent_Identity=28.5714285714286, Blast_Score=115, Evalue=5e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR002129
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 42283; Mature: 42283

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSDVIAFIQDLYGSKSFIPLHAPIFTGNEKKYVIEAIDSTYVSSVGAFVDRFEVDFAKY
CHHHHHHHHHHHHCCCCEEEEECCEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
VGAKKAVVTGNGTSALHAALHLLGVSRGDEVITQALTFVATPNAISYCGASPVFLDSDEL
CCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCCCEEECCCCE
TLGLSVTSLAEFLFQNAEVRGDFCYNKRTGNRIMACMPMHVFGHPVQIKEIVKLCDEYSI
EEEEEHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEECHHHCCCCCCHHHHHHHHHHCCC
PVIEDAAESLGSEFEGRHTGLYGRIGVFSFNGNKIITSGGGGMLVTNDVDLGIRAKHLTT
CHHHHHHHHHCHHCCCCCCCCEEEEEEEEECCCEEEEECCCCEEEEECCCCCEEEEEEEE
TAKVPHAWEFFHDEIGFNYRMPNLNAALIVGQLEQLPRFVRDKRETAQIYNSYFSHKGIE
ECCCCHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
FVCEPFGAKSNYWLNAILLSSRSERDSFLNETNRSGVMTRPVWNLMPDLPMYRTNLCGDI
EEECCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCEECCHHHHCCCCCCHHHCCCCCH
SVARMLSDRLVNIPSSVRLPRG
HHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MFSDVIAFIQDLYGSKSFIPLHAPIFTGNEKKYVIEAIDSTYVSSVGAFVDRFEVDFAKY
CHHHHHHHHHHHHCCCCEEEEECCEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHH
VGAKKAVVTGNGTSALHAALHLLGVSRGDEVITQALTFVATPNAISYCGASPVFLDSDEL
CCCCEEEEECCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCCCCEEECCCCE
TLGLSVTSLAEFLFQNAEVRGDFCYNKRTGNRIMACMPMHVFGHPVQIKEIVKLCDEYSI
EEEEEHHHHHHHHHHCCCCCCEEEECCCCCCEEEEEECHHHCCCCCCHHHHHHHHHHCCC
PVIEDAAESLGSEFEGRHTGLYGRIGVFSFNGNKIITSGGGGMLVTNDVDLGIRAKHLTT
CHHHHHHHHHCHHCCCCCCCCEEEEEEEEECCCEEEEECCCCEEEEECCCCCEEEEEEEE
TAKVPHAWEFFHDEIGFNYRMPNLNAALIVGQLEQLPRFVRDKRETAQIYNSYFSHKGIE
ECCCCHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
FVCEPFGAKSNYWLNAILLSSRSERDSFLNETNRSGVMTRPVWNLMPDLPMYRTNLCGDI
EEECCCCCCCCCEEEEEEECCCCHHHHHHHHCCCCCCEECCHHHHCCCCCCHHHCCCCCH
SVARMLSDRLVNIPSSVRLPRG
HHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]