Click here to switch to the map view.

The map label for this gene is rfbG [H]

Identifier: 42523165

GI number: 42523165

Start: 1596627

End: 1597652

Strand: Direct

Name: rfbG [H]

Synonym: Bd1665

Alternate gene names: 42523165

Gene position: 1596627-1597652 (Clockwise)

Preceding gene: 42523164

Following gene: 42523166

Centisome position: 42.21

GC content: 51.36

Gene sequence:

>1026_bases
GTGACTAATTTCTGGAACGGCAAAAGAGTTTTCGTCACCTGCCCCACGGGTTTTCTGGGGGCGTGGGTGGTGCAGACTTT
GCTTGATTCCCAAGCTCAGGTGTTTGGTTTTGGTGAAACAGCCACCACATCTCCGAATCTTTTTGATCTGAAAAACCTGG
GCCAGAAAATCTCGATGACCTACGGGGACCTGCGGGATGAGTCCGCATTGCGCGAGGCTTTGCAATTTACCGAAGCTGAT
GTGGTTCTGCATCTGGGCGAAAGTGGCCTGATTTCAGATCTTGGCAAAAGACCTCTGGAAACCTTTGCCAAAGCGGCGTT
GGGAACGGCGACTTTGATGGAGCTGATGCGGGAAACGGCCTCGGTTCGTTCGTTGGTGGTTGTTAGTTCTGACAAGGTCT
ATGCACGAAAAACATCCGGCGAAGAGCTGGTTGAAACAGATGCGGTGGCGCCATCAGCGATTTTGCCCACGGCCAAGCTG
TGTGCCGAGATGATCGCACTATCTTATCGTCAGAGCTTCTTTGCTCCTGAAAAATACAACAAGCATAAAATTGCCATTGC
CACGGCCCGGATGGGTTCTGCCATCGGAGGCGGGGACTTCACCGAACACGCATTGATTCCGCAGGCTGTGCAGGCCTTTG
TTGCGGGGAATAGTTTTGAATTGAAGAACCCTCAGTCCGTGCGCCCGTGGATTCACGTGCTGGATCAGGTGGCGGGTCTT
TTGAGTCTTGCCGAAGCTTTGTTTGAGCGCGGGCCGAAGCTGGCGCCGACCTATAATTTTGCGGCGAAAGAGACTAACAC
AGTCGGCGAAGTTGCGCAAGCTTTGGCTCGTTATTGGGGAGAAAATGCCCGGGTGAATTTGGGCGAGGGGTCGAAGTCCT
CTTTGTCTGTTCATGCGAATTTGGATTCAAAGCTCGCTCAGAGCGATCTGAACTGGAAAGTTCAAAGAAACCTCACAGAT
GCTCTGAAAGAAACACTTCAGTGGTATAAAGAATTTTATTCTTCAAGGACTTCTGCTACCTTGTAG

Upstream 100 bases:

>100_bases
CTTTTACTGGAACTATGAAGGCAAGGTTCTGGCGCACTGGGTGCACCCGGATCATCGCGGTCATGGGGTAGAACAAAATC
TTCTGGGCGGCGCTTAAGCC

Downstream 100 bases:

>100_bases
GGATGGCCTTTTCCGGATTAAGTCTTCAAAAAATTTCTCATTTAGTCAGCCCCAAGGATCTTGCGACCCTGGAGCAAATG
CCTGTTGCTGAAAACGCATT

Product: CDP-D-glucose-4,6-dehydratase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 340

Protein sequence:

>341_residues
MTNFWNGKRVFVTCPTGFLGAWVVQTLLDSQAQVFGFGETATTSPNLFDLKNLGQKISMTYGDLRDESALREALQFTEAD
VVLHLGESGLISDLGKRPLETFAKAALGTATLMELMRETASVRSLVVVSSDKVYARKTSGEELVETDAVAPSAILPTAKL
CAEMIALSYRQSFFAPEKYNKHKIAIATARMGSAIGGGDFTEHALIPQAVQAFVAGNSFELKNPQSVRPWIHVLDQVAGL
LSLAEALFERGPKLAPTYNFAAKETNTVGEVAQALARYWGENARVNLGEGSKSSLSVHANLDSKLAQSDLNWKVQRNLTD
ALKETLQWYKEFYSSRTSATL

Sequences:

>Translated_341_residues
MTNFWNGKRVFVTCPTGFLGAWVVQTLLDSQAQVFGFGETATTSPNLFDLKNLGQKISMTYGDLRDESALREALQFTEAD
VVLHLGESGLISDLGKRPLETFAKAALGTATLMELMRETASVRSLVVVSSDKVYARKTSGEELVETDAVAPSAILPTAKL
CAEMIALSYRQSFFAPEKYNKHKIAIATARMGSAIGGGDFTEHALIPQAVQAFVAGNSFELKNPQSVRPWIHVLDQVAGL
LSLAEALFERGPKLAPTYNFAAKETNTVGEVAQALARYWGENARVNLGEGSKSSLSVHANLDSKLAQSDLNWKVQRNLTD
ALKETLQWYKEFYSSRTSATL
>Mature_340_residues
TNFWNGKRVFVTCPTGFLGAWVVQTLLDSQAQVFGFGETATTSPNLFDLKNLGQKISMTYGDLRDESALREALQFTEADV
VLHLGESGLISDLGKRPLETFAKAALGTATLMELMRETASVRSLVVVSSDKVYARKTSGEELVETDAVAPSAILPTAKLC
AEMIALSYRQSFFAPEKYNKHKIAIATARMGSAIGGGDFTEHALIPQAVQAFVAGNSFELKNPQSVRPWIHVLDQVAGLL
SLAEALFERGPKLAPTYNFAAKETNTVGEVAQALARYWGENARVNLGEGSKSSLSVHANLDSKLAQSDLNWKVQRNLTDA
LKETLQWYKEFYSSRTSATL

Specific function: Galactose metabolism; third step. [C]

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786974, Length=339, Percent_Identity=23.8938053097345, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI48994969, Length=346, Percent_Identity=20.5202312138728, Blast_Score=64, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013445
- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =4.2.1.45 [H]

Molecular weight: Translated: 37208; Mature: 37076

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNFWNGKRVFVTCPTGFLGAWVVQTLLDSQAQVFGFGETATTSPNLFDLKNLGQKISMT
CCCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHEEECCCCCCCCCCCHHHHHHHHHHHHH
YGDLRDESALREALQFTEADVVLHLGESGLISDLGKRPLETFAKAALGTATLMELMRETA
HCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
SVRSLVVVSSDKVYARKTSGEELVETDAVAPSAILPTAKLCAEMIALSYRQSFFAPEKYN
HHHEEEEEECCCEEEECCCCHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCC
KHKIAIATARMGSAIGGGDFTEHALIPQAVQAFVAGNSFELKNPQSVRPWIHVLDQVAGL
CCEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
LSLAEALFERGPKLAPTYNFAAKETNTVGEVAQALARYWGENARVNLGEGSKSSLSVHAN
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEEC
LDSKLAQSDLNWKVQRNLTDALKETLQWYKEFYSSRTSATL
CHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TNFWNGKRVFVTCPTGFLGAWVVQTLLDSQAQVFGFGETATTSPNLFDLKNLGQKISMT
CCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHEEECCCCCCCCCCCHHHHHHHHHHHHH
YGDLRDESALREALQFTEADVVLHLGESGLISDLGKRPLETFAKAALGTATLMELMRETA
HCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
SVRSLVVVSSDKVYARKTSGEELVETDAVAPSAILPTAKLCAEMIALSYRQSFFAPEKYN
HHHEEEEEECCCEEEECCCCHHHHHHHCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCC
KHKIAIATARMGSAIGGGDFTEHALIPQAVQAFVAGNSFELKNPQSVRPWIHVLDQVAGL
CCEEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
LSLAEALFERGPKLAPTYNFAAKETNTVGEVAQALARYWGENARVNLGEGSKSSLSVHAN
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCEEECCCCCCCCEEEEEC
LDSKLAQSDLNWKVQRNLTDALKETLQWYKEFYSSRTSATL
CHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]