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The map label for this gene is 42523142

Identifier: 42523142

GI number: 42523142

Start: 1576083

End: 1576604

Strand: Direct

Name: 42523142

Synonym: Bd1640

Alternate gene names: NA

Gene position: 1576083-1576604 (Clockwise)

Preceding gene: 42523141

Following gene: 42523144

Centisome position: 41.66

GC content: 48.28

Gene sequence:

>522_bases
ATGAGTAATCCGTCCCTGGAAGCTGACAGCTCCGAGCTGTCGCTAGGGGATCATCATATTGATTTTGTCGAAGAGACCGA
AAAAGCCACTTCCGTTCCTGTGACGGCGGCGACTCCGATTTCCATCCCGGCGATGCTGTGTGATGAGAAGCTTCTGGAAG
AAATCAATGCCATTCCGGACAAAATGGGTTTCAAGATCGGCGACGTGGCTGAGATCCTGGGCATCAAACAATACGTTCTT
CGTTACTGGGAAACAGAGTTTGAAGTTCTTCGTCCGAAAAAAGCCTCTAACAACCAGCGCATGTACACTCGTAAAGATGT
TGAAAACGCGCTGTTGATCAGAAAGCTTCTGCACCGTGACCGCTTCTCTATCGAAGGCGCAAGAAACGCGATGAAAGAGC
TGAAAGCTCACGTTAGAAAAGAAAAAGATATGACCCAAGTTTACCACAAGCTTGAGGGTATCAACGAAGCGGTGGAGGAT
CTGATCCTCGACATCCGCAGAGTCCGTCAGATTTTCAAATAG

Upstream 100 bases:

>100_bases
GTTCTTACTTTCCGTCCGTCTCAGGTTTTGAAGGCGATGTTGAACGGTGAAGAGTACGCTCACTTAAAAGATGAGGACGA
TGATGATGACTACGACGACA

Downstream 100 bases:

>100_bases
TTTTAAAAGAAAAAGGCCTCTTACGAGGCCTTTTTTGTTTTAGACGGTTCCTGTTTGTTATGCATGGAAGGTCCAAAAAG
CTGCTTGCCGTAAAGTTAAA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator MerR Family; Transcriptional Regulator; Transcription Regulator Protein; Transcriptional Regulator MerR Family Protein; Transcriptional Regulator Protein; Transcriptional Regulator Merr Family; Regulatory Protein MerR; MerR-Family Transcriptional Regulator; TRANSCRIPTIONal REGULATOR MerR Family; Transcriptional Regulatory Protein; Regulatory Protein Merr; MerR Family Regulatory Family; Transcriptional Regulator Domain-Containing Protein

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MSNPSLEADSSELSLGDHHIDFVEETEKATSVPVTAATPISIPAMLCDEKLLEEINAIPDKMGFKIGDVAEILGIKQYVL
RYWETEFEVLRPKKASNNQRMYTRKDVENALLIRKLLHRDRFSIEGARNAMKELKAHVRKEKDMTQVYHKLEGINEAVED
LILDIRRVRQIFK

Sequences:

>Translated_173_residues
MSNPSLEADSSELSLGDHHIDFVEETEKATSVPVTAATPISIPAMLCDEKLLEEINAIPDKMGFKIGDVAEILGIKQYVL
RYWETEFEVLRPKKASNNQRMYTRKDVENALLIRKLLHRDRFSIEGARNAMKELKAHVRKEKDMTQVYHKLEGINEAVED
LILDIRRVRQIFK
>Mature_172_residues
SNPSLEADSSELSLGDHHIDFVEETEKATSVPVTAATPISIPAMLCDEKLLEEINAIPDKMGFKIGDVAEILGIKQYVLR
YWETEFEVLRPKKASNNQRMYTRKDVENALLIRKLLHRDRFSIEGARNAMKELKAHVRKEKDMTQVYHKLEGINEAVEDL
ILDIRRVRQIFK

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19935; Mature: 19804

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNPSLEADSSELSLGDHHIDFVEETEKATSVPVTAATPISIPAMLCDEKLLEEINAIPD
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCHH
KMGFKIGDVAEILGIKQYVLRYWETEFEVLRPKKASNNQRMYTRKDVENALLIRKLLHRD
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RFSIEGARNAMKELKAHVRKEKDMTQVYHKLEGINEAVEDLILDIRRVRQIFK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SNPSLEADSSELSLGDHHIDFVEETEKATSVPVTAATPISIPAMLCDEKLLEEINAIPD
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCHH
KMGFKIGDVAEILGIKQYVLRYWETEFEVLRPKKASNNQRMYTRKDVENALLIRKLLHRD
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
RFSIEGARNAMKELKAHVRKEKDMTQVYHKLEGINEAVEDLILDIRRVRQIFK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA