Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523098

Identifier: 42523098

GI number: 42523098

Start: 1521606

End: 1522700

Strand: Direct

Name: 42523098

Synonym: Bd1593

Alternate gene names: NA

Gene position: 1521606-1522700 (Clockwise)

Preceding gene: 42523097

Following gene: 42523099

Centisome position: 40.22

GC content: 48.4

Gene sequence:

>1095_bases
TTGAGTGAGGGAACTGCCGATAAGTTTGGGATGAGAAGTGTTTTTGGTGTCGTGTTCTTGTTTTTGATGCAGGCGCAGGC
TTTTGAAATTTCGAAGCAATCGGGCAAGCTTATTTTGTCGGGGGCGTGTGAAGAAGGGAAAAGTATTTACTCTTCTTTGG
CGCGGTGGAGCACGAATGCTAAGACGGGGAAGACTTGTGATCCTGTGGCTGTGGCTGGGGAGTCCGGTGGTTCCTGTAAT
TTGGATATCACGGATTGTGTGCCCGAACATGTGGTCAAATATCATGGGGCCAGGCCGGAAGTGGATGGGCCAAACTGTTG
GAATCTGTCTTTGGTGATGAGTAAAATTTTGCCAGCCATGCGTTATTCTACGCCGGAAGAAATGAATTTTTATATGCGTC
CGCCTCTTTGCCGCGCTTTAAAAGACGGTGAAAAGAAAGAGCCGGGGGATGTCGGTGCCATTCGTCAGATCGCGGGTTTT
AATAAGACCGAGGAATATCACGGGTTCATCTATATCGATGAAAAAATCGCCTACTCTAAAAACGGTTTTAGCAACATGGC
GCCTTATGAATTGCAGACATTGGATAAGGTTTACAGGACCTACGAAGTCCCGGATAAACCGGGATGTCGCCAAAATGTGA
TCAACTCCAAGAGCTCCCAGTGTGGTCAGGCGGTGGCCTTCTATCGCTGTGATTCCATGGATGAATACTTGGAAAAAAAC
AAAAATGTTCCGGATCAGGTTCGTGAATCCTTTAAGAATATGGATGCGGCTGAAAACTGCGTGCAGGAAGCTCTGTTTAA
AGGGGATACTTTAAGTGTTGAAGCCCGCAAGAACCTGCGTGATACAGGCCTTGCGCTTGTCGAGTACCTGCAAAGCGCGA
AGAGCAAACCTGAAGTTGCCAAAATGAAAGCTGAAGAGCGTGACTTCCTTTTGGGAAGTCTGCAACTGCGTCTGGCGGCT
CTGGGTGATCAATTGGAGTTCGTCGCGATGGAAAGGCAGGATGGCGAGGCCTTTAAAGCCTCCGGCGAATTGAAATACGT
GGCCGAGATGTTACAGGCCTCGGCAAAGCAGCTGAAAAAAGGAGCTCGCAAATGA

Upstream 100 bases:

>100_bases
CGGGACTGCCTTTGCTGGGTTGTGAAGGTGTGTGGATGGTTTGGGGTGGGGAGTTTATGGGTTACTTTAGGTTTTTGGTT
GGACGTTTGTCTGTCTTATT

Downstream 100 bases:

>100_bases
GGAATGCATTGTTGATGTTGTTGGCAGGATTTGTTTTGGCGGGCTGTGGCTCTGTGTGGAAGGGGCCCGAGGCGGCACCG
GTGCGCAAGCCTGATAATGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 364; Mature: 363

Protein sequence:

>364_residues
MSEGTADKFGMRSVFGVVFLFLMQAQAFEISKQSGKLILSGACEEGKSIYSSLARWSTNAKTGKTCDPVAVAGESGGSCN
LDITDCVPEHVVKYHGARPEVDGPNCWNLSLVMSKILPAMRYSTPEEMNFYMRPPLCRALKDGEKKEPGDVGAIRQIAGF
NKTEEYHGFIYIDEKIAYSKNGFSNMAPYELQTLDKVYRTYEVPDKPGCRQNVINSKSSQCGQAVAFYRCDSMDEYLEKN
KNVPDQVRESFKNMDAAENCVQEALFKGDTLSVEARKNLRDTGLALVEYLQSAKSKPEVAKMKAEERDFLLGSLQLRLAA
LGDQLEFVAMERQDGEAFKASGELKYVAEMLQASAKQLKKGARK

Sequences:

>Translated_364_residues
MSEGTADKFGMRSVFGVVFLFLMQAQAFEISKQSGKLILSGACEEGKSIYSSLARWSTNAKTGKTCDPVAVAGESGGSCN
LDITDCVPEHVVKYHGARPEVDGPNCWNLSLVMSKILPAMRYSTPEEMNFYMRPPLCRALKDGEKKEPGDVGAIRQIAGF
NKTEEYHGFIYIDEKIAYSKNGFSNMAPYELQTLDKVYRTYEVPDKPGCRQNVINSKSSQCGQAVAFYRCDSMDEYLEKN
KNVPDQVRESFKNMDAAENCVQEALFKGDTLSVEARKNLRDTGLALVEYLQSAKSKPEVAKMKAEERDFLLGSLQLRLAA
LGDQLEFVAMERQDGEAFKASGELKYVAEMLQASAKQLKKGARK
>Mature_363_residues
SEGTADKFGMRSVFGVVFLFLMQAQAFEISKQSGKLILSGACEEGKSIYSSLARWSTNAKTGKTCDPVAVAGESGGSCNL
DITDCVPEHVVKYHGARPEVDGPNCWNLSLVMSKILPAMRYSTPEEMNFYMRPPLCRALKDGEKKEPGDVGAIRQIAGFN
KTEEYHGFIYIDEKIAYSKNGFSNMAPYELQTLDKVYRTYEVPDKPGCRQNVINSKSSQCGQAVAFYRCDSMDEYLEKNK
NVPDQVRESFKNMDAAENCVQEALFKGDTLSVEARKNLRDTGLALVEYLQSAKSKPEVAKMKAEERDFLLGSLQLRLAAL
GDQLEFVAMERQDGEAFKASGELKYVAEMLQASAKQLKKGARK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40438; Mature: 40307

Theoretical pI: Translated: 6.74; Mature: 6.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEGTADKFGMRSVFGVVFLFLMQAQAFEISKQSGKLILSGACEEGKSIYSSLARWSTNA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCC
KTGKTCDPVAVAGESGGSCNLDITDCVPEHVVKYHGARPEVDGPNCWNLSLVMSKILPAM
CCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
RYSTPEEMNFYMRPPLCRALKDGEKKEPGDVGAIRQIAGFNKTEEYHGFIYIDEKIAYSK
HCCCHHHCCEEECCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCHHCCC
NGFSNMAPYELQTLDKVYRTYEVPDKPGCRQNVINSKSSQCGQAVAFYRCDSMDEYLEKN
CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHC
KNVPDQVRESFKNMDAAENCVQEALFKGDTLSVEARKNLRDTGLALVEYLQSAKSKPEVA
CCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEHHHHCHHHHHHHHHHHHHHHCCCCHHH
KMKAEERDFLLGSLQLRLAALGDQLEFVAMERQDGEAFKASGELKYVAEMLQASAKQLKK
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHH
GARK
CCCC
>Mature Secondary Structure 
SEGTADKFGMRSVFGVVFLFLMQAQAFEISKQSGKLILSGACEEGKSIYSSLARWSTNA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHCCCC
KTGKTCDPVAVAGESGGSCNLDITDCVPEHVVKYHGARPEVDGPNCWNLSLVMSKILPAM
CCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH
RYSTPEEMNFYMRPPLCRALKDGEKKEPGDVGAIRQIAGFNKTEEYHGFIYIDEKIAYSK
HCCCHHHCCEEECCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCEEEEECCHHCCC
NGFSNMAPYELQTLDKVYRTYEVPDKPGCRQNVINSKSSQCGQAVAFYRCDSMDEYLEKN
CCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHC
KNVPDQVRESFKNMDAAENCVQEALFKGDTLSVEARKNLRDTGLALVEYLQSAKSKPEVA
CCCCHHHHHHHHCCCHHHHHHHHHHHCCCCEEEHHHHCHHHHHHHHHHHHHHHCCCCHHH
KMKAEERDFLLGSLQLRLAALGDQLEFVAMERQDGEAFKASGELKYVAEMLQASAKQLKK
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHCCCCHHHHHHHHHHHHHHHHH
GARK
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA