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The map label for this gene is ybfF [C]

Identifier: 42523067

GI number: 42523067

Start: 1487559

End: 1488254

Strand: Direct

Name: ybfF [C]

Synonym: Bd1561

Alternate gene names: 42523067

Gene position: 1487559-1488254 (Clockwise)

Preceding gene: 42523066

Following gene: 42523068

Centisome position: 39.32

GC content: 49.28

Gene sequence:

>696_bases
ATGAAAAATCTGGTCGTAATTCCTACCTACAACGAAAAAGAAAATATTCAGGCGATTGTGCCTGCGGTATTGGCGCAGAA
CCTGGGTGTTGAAATTCTGGTTGTTGATGACAACTCTCCGGATGGCACTGGGGCCATTGTTCGTGAAATGCAAAAAAGCT
TGCCACAGCTTCATATTCTTTCCCGTCCCGGCAAGCAGGGTTTGGGCAAGGCCTATATCGCGGGTTTCCGCTGGGCCATG
GATCATGGCTTTGAGGGCATCATCGAAATGGATGCAGATTTTTCTCACCGTCCCGAGGACCTGGGGCCTTTGATCAAGAC
GATGGAAGCCAATGATTTTGCTGTGGGTTCCCGCTATGTGGATGGTGGTCGCACGGTGAACTGGGGTTTGATCCGCAAGA
TCATCTCCCGGGGGGGCGGCATCTATTCCCGATTGATTCTGGGCTTCCCGCTGAATGACTGGACAGGGGGCTTCAACGCC
TGGAAAAAAGAGGTTCTGCACGGGATTGATCTTTCCACGGTTGAATCCAACGGTTACAGCTTCCAGATCGAATTGAAATA
CAAAGCTTTGAAAAAGGGTTTCAAAGGGGCGGAGTCTCCGATTGTCTTTGAAGACCGTCGTGTGGGCCAAAGTAAAATGT
CTCTGAAAATTGTGCTTGAGGCTTTCTATCGTGTTTGGCTTATGCGTTTTAAATAG

Upstream 100 bases:

>100_bases
AAAGCGAAGGCCCTCCAGGATAAGGGCAAAGGCCGCTTGGTATCGCGGTCAATTTGATCTAAAGATTGCAAGTCGGGGCT
CTTTGTGACAGCTTAGAGCC

Downstream 100 bases:

>100_bases
GGCAGCGCTGCTGCTCTTGATGTTCTTTCTGTTTCCTGTCAGTTTGTGGGCGCAAGCCCAGCAGGCGACGGTGATTCTGG
ATGGCGCCCTGGTGTATCAG

Product: putative glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MKNLVVIPTYNEKENIQAIVPAVLAQNLGVEILVVDDNSPDGTGAIVREMQKSLPQLHILSRPGKQGLGKAYIAGFRWAM
DHGFEGIIEMDADFSHRPEDLGPLIKTMEANDFAVGSRYVDGGRTVNWGLIRKIISRGGGIYSRLILGFPLNDWTGGFNA
WKKEVLHGIDLSTVESNGYSFQIELKYKALKKGFKGAESPIVFEDRRVGQSKMSLKIVLEAFYRVWLMRFK

Sequences:

>Translated_231_residues
MKNLVVIPTYNEKENIQAIVPAVLAQNLGVEILVVDDNSPDGTGAIVREMQKSLPQLHILSRPGKQGLGKAYIAGFRWAM
DHGFEGIIEMDADFSHRPEDLGPLIKTMEANDFAVGSRYVDGGRTVNWGLIRKIISRGGGIYSRLILGFPLNDWTGGFNA
WKKEVLHGIDLSTVESNGYSFQIELKYKALKKGFKGAESPIVFEDRRVGQSKMSLKIVLEAFYRVWLMRFK
>Mature_231_residues
MKNLVVIPTYNEKENIQAIVPAVLAQNLGVEILVVDDNSPDGTGAIVREMQKSLPQLHILSRPGKQGLGKAYIAGFRWAM
DHGFEGIIEMDADFSHRPEDLGPLIKTMEANDFAVGSRYVDGGRTVNWGLIRKIISRGGGIYSRLILGFPLNDWTGGFNA
WKKEVLHGIDLSTVESNGYSFQIELKYKALKKGFKGAESPIVFEDRRVGQSKMSLKIVLEAFYRVWLMRFK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4503363, Length=217, Percent_Identity=37.7880184331797, Blast_Score=132, Evalue=3e-31,
Organism=Caenorhabditis elegans, GI71999402, Length=236, Percent_Identity=38.135593220339, Blast_Score=140, Evalue=4e-34,
Organism=Saccharomyces cerevisiae, GI6325441, Length=228, Percent_Identity=29.3859649122807, Blast_Score=92, Evalue=9e-20,
Organism=Drosophila melanogaster, GI24585265, Length=220, Percent_Identity=38.1818181818182, Blast_Score=137, Evalue=4e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 25859; Mature: 25859

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLVVIPTYNEKENIQAIVPAVLAQNLGVEILVVDDNSPDGTGAIVREMQKSLPQLHIL
CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEE
SRPGKQGLGKAYIAGFRWAMDHGFEGIIEMDADFSHRPEDLGPLIKTMEANDFAVGSRYV
CCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCEECCCEEE
DGGRTVNWGLIRKIISRGGGIYSRLILGFPLNDWTGGFNAWKKEVLHGIDLSTVESNGYS
CCCCEECHHHHHHHHHCCCCHHHHHEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCEE
FQIELKYKALKKGFKGAESPIVFEDRRVGQSKMSLKIVLEAFYRVWLMRFK
EEEEEEHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNLVVIPTYNEKENIQAIVPAVLAQNLGVEILVVDDNSPDGTGAIVREMQKSLPQLHIL
CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEE
SRPGKQGLGKAYIAGFRWAMDHGFEGIIEMDADFSHRPEDLGPLIKTMEANDFAVGSRYV
CCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCEECCCEEE
DGGRTVNWGLIRKIISRGGGIYSRLILGFPLNDWTGGFNAWKKEVLHGIDLSTVESNGYS
CCCCEECHHHHHHHHHCCCCHHHHHEEECCCCCCCCCHHHHHHHHHHCCCCEEEECCCEE
FQIELKYKALKKGFKGAESPIVFEDRRVGQSKMSLKIVLEAFYRVWLMRFK
EEEEEEHHHHHCCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]