| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
Click here to switch to the map view.
The map label for this gene is rimI [C]
Identifier: 42523051
GI number: 42523051
Start: 1469173
End: 1469610
Strand: Direct
Name: rimI [C]
Synonym: Bd1544
Alternate gene names: 42523051
Gene position: 1469173-1469610 (Clockwise)
Preceding gene: 42523050
Following gene: 42523052
Centisome position: 38.84
GC content: 55.71
Gene sequence:
>438_bases ATGCATGTGGAAGTTCTAAAAGGGCCACAGAAGCCCGCAATGCGTGCCCTGGTGGAGGCGATTCATGCCGAACAGGGGCT GGCCGCGTCTTTTTACTGGCCCCAGGATTTATTGGGGGCCGAGCTGGCCACGGCTGAAGCCATCGGAGTCTTTGAAGGTG AGGTTCTTACGGGTTTTGTCCTGTACCGTGAAACCCCGGATGTTTGGGAGATTTCGCTGGTGGCGACCCATCCTCAGTTT CGCCGTCGCGGCCTGATGGAGCACCTGTTGAGGCATATGATCGCCGCAAAGGGTCAAGGTCGGGCCTTGTGGCTGGAAGT TCATGAAGAGAATGTTTCTGCGCAAAAACTCTATGAAAAACTCGGGTTTACGGAAGTTCGCCGGCGCCCCCGGTACTATA AGGACGGGGCCACAGCGATTTTGTACTCACTATCCTGA
Upstream 100 bases:
>100_bases AGGCGTTTCTGGCCCAGCAGCAGCTGGAAGAGCGCATCCGCTCGTGGTTTGAAGTTATTCAGCGTAAATACAAAGTGCGA AATTTCGTGGCGGAATAAGT
Downstream 100 bases:
>100_bases CCCACAAAGGGTCCAAGGGCTCAGCTCAGATAAACCCTTGCACTTCTTCGATTTTATTGTTAATTTAGATCCGTTCAATG GGCCCCGCAGGCCCATTTTT
Product: putative peptide N-acetyltransferase
Products: CoA; ribosomal-protein N-acetyl-L-alanine
Alternate protein names: Acetyltransferase; Peptide N-Acetyltransferase
Number of amino acids: Translated: 145; Mature: 145
Protein sequence:
>145_residues MHVEVLKGPQKPAMRALVEAIHAEQGLAASFYWPQDLLGAELATAEAIGVFEGEVLTGFVLYRETPDVWEISLVATHPQF RRRGLMEHLLRHMIAAKGQGRALWLEVHEENVSAQKLYEKLGFTEVRRRPRYYKDGATAILYSLS
Sequences:
>Translated_145_residues MHVEVLKGPQKPAMRALVEAIHAEQGLAASFYWPQDLLGAELATAEAIGVFEGEVLTGFVLYRETPDVWEISLVATHPQF RRRGLMEHLLRHMIAAKGQGRALWLEVHEENVSAQKLYEKLGFTEVRRRPRYYKDGATAILYSLS >Mature_145_residues MHVEVLKGPQKPAMRALVEAIHAEQGLAASFYWPQDLLGAELATAEAIGVFEGEVLTGFVLYRETPDVWEISLVATHPQF RRRGLMEHLLRHMIAAKGQGRALWLEVHEENVSAQKLYEKLGFTEVRRRPRYYKDGATAILYSLS
Specific function: This Enzyme Acetylates The N-Terminal Alanine Of Ribosomal Protein S18. [C]
COG id: COG0456
COG function: function code R; Acetyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 2.3.1.128
Molecular weight: Translated: 16445; Mature: 16445
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHVEVLKGPQKPAMRALVEAIHAEQGLAASFYWPQDLLGAELATAEAIGVFEGEVLTGFV CCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHEEEEE LYRETPDVWEISLVATHPQFRRRGLMEHLLRHMIAAKGQGRALWLEVHEENVSAQKLYEK EECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHH LGFTEVRRRPRYYKDGATAILYSLS HCHHHHHHCCCCCCCCCEEEEEECC >Mature Secondary Structure MHVEVLKGPQKPAMRALVEAIHAEQGLAASFYWPQDLLGAELATAEAIGVFEGEVLTGFV CCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCHHEEEEE LYRETPDVWEISLVATHPQFRRRGLMEHLLRHMIAAKGQGRALWLEVHEENVSAQKLYEK EECCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHH LGFTEVRRRPRYYKDGATAILYSLS HCHHHHHHCCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acetyl-CoA; ribosomal-protein L-alanine
Specific reaction: acetyl-CoA + ribosomal-protein L-alanine = CoA + ribosomal-protein N-acetyl-L-alanine
General reaction: Acyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA