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The map label for this gene is yqeN [H]

Identifier: 42522977

GI number: 42522977

Start: 1385281

End: 1386291

Strand: Direct

Name: yqeN [H]

Synonym: Bd1464

Alternate gene names: 42522977

Gene position: 1385281-1386291 (Clockwise)

Preceding gene: 42522976

Following gene: 42522979

Centisome position: 36.62

GC content: 52.13

Gene sequence:

>1011_bases
GTGGCACTCATCGATGCGCAGAAATTCTATCGCGATCTTGAAAAAGGTCAGACTGCGCCGATGTATTTCCTTTTCGGGGA
AGAGCCTTACCTGCTGAATCAATCCGTCGAGCGCTTCAAGTACGCGGTCCTGACCGAAGGCGCGGTGGATTTCAACTACA
GCCTGTTCTATGCTTCCGATGCGGATGTGGTGTCGGTGCGTGATGCCGTTGAAACTTTGCCGATGATGGCTCAGCGCCGT
TTGGTGATCCTAAAAGAAGCCCAGGAATTGACCGACAAGGAATGGGCCGAGCTGGAGCCTTTGCTTGAATCCCCGGTGGA
CAGCACCGTGTTTGTGATTCTGGCGTCCCGCGTGGACAAGCGCAAAAAACAGATCCGTCTTTTGCTCGACAAAGCCGACT
GTGTTGAATTCAAAAAACCTTACGAAAATCAGATCCCTTCCTGGATCAACTACATCGCGCAATCCCTGGGTTTGACGATC
AGTAACGATGCCATCTTGCTTTTGCATAAGCTGGTGGGTCATCACCTGACCGAAATCGAAGGGGAGCTTAAAAAACTGGG
CGAATTCGTGGGCGAGCGTCGTATTGAAGTGGCAGATGTGGCTCAGGCCGTGTCTCGCTCGAAGGAAGAAAACGTTTTTG
ATTTCACCAAAGCCATCGGCGAAAACGACCGTGTAAAGGCTTTGGAGCTTTTGGTTCACTTGCTGGATCAGGGGCAGAAC
GAGATCGGGATCGTGTCTTTGGTGGCCCGCCACGTGCGTATCCTGCTGACTTTGAAGCGGGGAATGGAAGAGGGCCTGCA
CGGCGCGAAGCTCGCGCATTTTGCCCAGGTGCCGCCTTATTTCCTGGAAAGCTATCTGGATCAAGCCCGACTTTGGACTG
CTAAAAAGCTGGAACAAACCCTGGTGGTTCTGTCTGAGACAGACAAGGCTTTGAAGTCCTCACCATTGTCCAGTCACATC
TGGCTGGAGAATCTTGTTTTAAAGACCTGCGGCACTCAATACGCCATGTGA

Upstream 100 bases:

>100_bases
TCTTTCTGCGCGAAGGCAGAACATTGACCTCATGGCTTATGACATTATGTCCGAAGCTCATGATCGTATTACCGAAAATT
TCTAAAAGGATATTCAACTC

Downstream 100 bases:

>100_bases
ACTATTCCAGCGAAGCTGGAGTGCAGACAATTTCAAGTTGATAGCTGAATAGACCGATAAGCTTTGTGATGAACAAAGCC
AATCCTGCATTTGAAGACAA

Product: DNA polymerase III, delta subunit

Products: diphosphate; DNAn+1

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MALIDAQKFYRDLEKGQTAPMYFLFGEEPYLLNQSVERFKYAVLTEGAVDFNYSLFYASDADVVSVRDAVETLPMMAQRR
LVILKEAQELTDKEWAELEPLLESPVDSTVFVILASRVDKRKKQIRLLLDKADCVEFKKPYENQIPSWINYIAQSLGLTI
SNDAILLLHKLVGHHLTEIEGELKKLGEFVGERRIEVADVAQAVSRSKEENVFDFTKAIGENDRVKALELLVHLLDQGQN
EIGIVSLVARHVRILLTLKRGMEEGLHGAKLAHFAQVPPYFLESYLDQARLWTAKKLEQTLVVLSETDKALKSSPLSSHI
WLENLVLKTCGTQYAM

Sequences:

>Translated_336_residues
MALIDAQKFYRDLEKGQTAPMYFLFGEEPYLLNQSVERFKYAVLTEGAVDFNYSLFYASDADVVSVRDAVETLPMMAQRR
LVILKEAQELTDKEWAELEPLLESPVDSTVFVILASRVDKRKKQIRLLLDKADCVEFKKPYENQIPSWINYIAQSLGLTI
SNDAILLLHKLVGHHLTEIEGELKKLGEFVGERRIEVADVAQAVSRSKEENVFDFTKAIGENDRVKALELLVHLLDQGQN
EIGIVSLVARHVRILLTLKRGMEEGLHGAKLAHFAQVPPYFLESYLDQARLWTAKKLEQTLVVLSETDKALKSSPLSSHI
WLENLVLKTCGTQYAM
>Mature_335_residues
ALIDAQKFYRDLEKGQTAPMYFLFGEEPYLLNQSVERFKYAVLTEGAVDFNYSLFYASDADVVSVRDAVETLPMMAQRRL
VILKEAQELTDKEWAELEPLLESPVDSTVFVILASRVDKRKKQIRLLLDKADCVEFKKPYENQIPSWINYIAQSLGLTIS
NDAILLLHKLVGHHLTEIEGELKKLGEFVGERRIEVADVAQAVSRSKEENVFDFTKAIGENDRVKALELLVHLLDQGQNE
IGIVSLVARHVRILLTLKRGMEEGLHGAKLAHFAQVPPYFLESYLDQARLWTAKKLEQTLVVLSETDKALKSSPLSSHIW
LENLVLKTCGTQYAM

Specific function: Unknown

COG id: COG1466

COG function: function code L; DNA polymerase III, delta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008921
- InterPro:   IPR010372
- InterPro:   IPR005790 [H]

Pfam domain/function: PF06144 DNA_pol3_delta [H]

EC number: 2.7.7.7

Molecular weight: Translated: 38179; Mature: 38047

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALIDAQKFYRDLEKGQTAPMYFLFGEEPYLLNQSVERFKYAVLTEGAVDFNYSLFYASD
CCCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECEEEEEECC
ADVVSVRDAVETLPMMAQRRLVILKEAQELTDKEWAELEPLLESPVDSTVFVILASRVDK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RKKQIRLLLDKADCVEFKKPYENQIPSWINYIAQSLGLTISNDAILLLHKLVGHHLTEIE
HHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHH
GELKKLGEFVGERRIEVADVAQAVSRSKEENVFDFTKAIGENDRVKALELLVHLLDQGQN
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
EIGIVSLVARHVRILLTLKRGMEEGLHGAKLAHFAQVPPYFLESYLDQARLWTAKKLEQT
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LVVLSETDKALKSSPLSSHIWLENLVLKTCGTQYAM
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ALIDAQKFYRDLEKGQTAPMYFLFGEEPYLLNQSVERFKYAVLTEGAVDFNYSLFYASD
CCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCCEEECEEEEEECC
ADVVSVRDAVETLPMMAQRRLVILKEAQELTDKEWAELEPLLESPVDSTVFVILASRVDK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH
RKKQIRLLLDKADCVEFKKPYENQIPSWINYIAQSLGLTISNDAILLLHKLVGHHLTEIE
HHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHCCEECCCHHHHHHHHHHHHHHHHH
GELKKLGEFVGERRIEVADVAQAVSRSKEENVFDFTKAIGENDRVKALELLVHLLDQGQN
HHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
EIGIVSLVARHVRILLTLKRGMEEGLHGAKLAHFAQVPPYFLESYLDQARLWTAKKLEQT
CHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LVVLSETDKALKSSPLSSHIWLENLVLKTCGTQYAM
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: deoxynucleoside triphosphate; DNAn

Specific reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1)

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]