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The map label for this gene is 42522941

Identifier: 42522941

GI number: 42522941

Start: 1345832

End: 1346278

Strand: Direct

Name: 42522941

Synonym: Bd1425

Alternate gene names: NA

Gene position: 1345832-1346278 (Clockwise)

Preceding gene: 42522940

Following gene: 42522944

Centisome position: 35.58

GC content: 50.34

Gene sequence:

>447_bases
ATGGACTATATCCGCCATATCTTCAAAGCCCTTCGTGTTTCTTCCAGTCAGTTTGAGAAAGATCTAGGTTTGAGTGCCGC
ACAGATTTTTGTGATGAAGAAACTCAAAGAAGAGCCAGGGCTTTCGATCAATGACCTGGCTTTGCGGACCACCACCCACC
AAAGCTCCGTTTCTGTGGTGGTCAAAAAGCTCGAAGAGCAAGGTCTTGTATCCCGCATGATCTCGAAAGAAGACTCCCGC
AAAGTGGTTGTATCGCTCACTCCCTCCGGTCTGGAAAAACTCAGCGAAATCCCCCGCACAGTTCAAGAACACATGATCGA
AACTCTTCAGAATATGCCGCCGGAAAAAACCGCATCGCTGGCTGAATTGATGCGTGAATTTGTCACCGAAGCGGGAATCG
TGGAGTCAGTGCCCGCGCCCATGTTTGGCGAGGACAGCGGTCGTTAG

Upstream 100 bases:

>100_bases
CAATGCATATAAAAATCGTTTGCACGATCTCAGCGAATAGTTCTTAATTGTTTTCATGAGTAATACTTATTCCGAGTACA
GGTCCGAGGTGGGTGAAGTC

Downstream 100 bases:

>100_bases
ATTTCCCTTTTGATCTGATCCAGATAAGTTCTGATGAAGGCGACACGATGTTCGCCTTCTTTTTTTGCTGTCGGTGTGTT
CAGGTGTTCCACCAGTTTGA

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; MarR Family Transcriptional Regulator

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MDYIRHIFKALRVSSSQFEKDLGLSAAQIFVMKKLKEEPGLSINDLALRTTTHQSSVSVVVKKLEEQGLVSRMISKEDSR
KVVVSLTPSGLEKLSEIPRTVQEHMIETLQNMPPEKTASLAELMREFVTEAGIVESVPAPMFGEDSGR

Sequences:

>Translated_148_residues
MDYIRHIFKALRVSSSQFEKDLGLSAAQIFVMKKLKEEPGLSINDLALRTTTHQSSVSVVVKKLEEQGLVSRMISKEDSR
KVVVSLTPSGLEKLSEIPRTVQEHMIETLQNMPPEKTASLAELMREFVTEAGIVESVPAPMFGEDSGR
>Mature_148_residues
MDYIRHIFKALRVSSSQFEKDLGLSAAQIFVMKKLKEEPGLSINDLALRTTTHQSSVSVVVKKLEEQGLVSRMISKEDSR
KVVVSLTPSGLEKLSEIPRTVQEHMIETLQNMPPEKTASLAELMREFVTEAGIVESVPAPMFGEDSGR

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16472; Mature: 16472

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYIRHIFKALRVSSSQFEKDLGLSAAQIFVMKKLKEEPGLSINDLALRTTTHQSSVSVV
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHH
VKKLEEQGLVSRMISKEDSRKVVVSLTPSGLEKLSEIPRTVQEHMIETLQNMPPEKTASL
HHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AELMREFVTEAGIVESVPAPMFGEDSGR
HHHHHHHHHHCCCHHCCCCCCCCCCCCC
>Mature Secondary Structure
MDYIRHIFKALRVSSSQFEKDLGLSAAQIFVMKKLKEEPGLSINDLALRTTTHQSSVSVV
CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHH
VKKLEEQGLVSRMISKEDSRKVVVSLTPSGLEKLSEIPRTVQEHMIETLQNMPPEKTASL
HHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AELMREFVTEAGIVESVPAPMFGEDSGR
HHHHHHHHHHCCCHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA