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The map label for this gene is 42522899

Identifier: 42522899

GI number: 42522899

Start: 1304344

End: 1305273

Strand: Direct

Name: 42522899

Synonym: Bd1380

Alternate gene names: NA

Gene position: 1304344-1305273 (Clockwise)

Preceding gene: 42522898

Following gene: 42522900

Centisome position: 34.48

GC content: 55.16

Gene sequence:

>930_bases
ATGAAGTTTATCCGCCAAATAACAGGTATAGTTTTGGTGACTGCGGGTTGTGCCAGCACAACTCCGCAGGTGGACTCGTT
GAATCTGCGCTCGGTGATCCCGCAAGAAACAGAAATATCCGGAGTGCCGTTCATTGAACAAAGTGAAGGTCACTGTGGCC
CGGCCACCTTGACCATGGCTTTGCATTGGGCGGGAAACAGCGTGCCTTTGTCGACGGTGACCTCGCAGGTTTATACGCCG
GGAATGAAGGGCAGTCTGCAGACAGACATGATCAGCGGAGCCCGCCGTCAGGGCATGATGGCGGTGCCGGTCACAGGGGT
GCAGAATCTGCTGCGGGAAGTGCGGGGTGGACATCCCGTCATCGTCTTTGAAAATCTCGCAGTGAGCTGGCTTCCGCAGT
GGCACTATGCCATTGTCTATGGTTTTGATCCCGTCAGGGAAGAAGTGATTCTGCACTCAGGCCCGGAGGCGGGAAAGCGC
TGGGACATCCGCAAGTTTGAACGCTCGTGGAAGCTGGGTGACTACTGGGGGCTGGTGGTGCTACCGGCTGGACAACTGTC
AGTCACCGCCTCGGAACGTGCCCATGTGACCGCGGCCGCGGCGTTGGAGGCATTGGGAAAAAATTCAGAAGCTGAAACGG
CCTATCAGAGCATTCTTGCTCGCTGGCCGCAAAGTCTGGCCGCCTATGTGGGCCTGGGAAATATCCACTATTCACGAAAG
CAGTATTCCCTGGCCATCAACAATTTACAGAAAGCCACCCATTTACAGCCCGAGTCAGCAGTGGCTTGGTATAATTTGAC
AATGGCTCAGGCTGCTCTGGGGCATACTTCCGAGGCCCGAAAAAGTGCCAAAGAGGCTTTGCGTTGGGCGGCGCCAGAGT
CAAAAAAACTTTATGCGCAGAATCTTCGTTCTTTTCTTGATGGTCCGTGA

Upstream 100 bases:

>100_bases
GACCTGTCTAAACAGGTCCAAGAAGCCAAAGCCGGAGGCGACATTTTGGTGACCATTCTAATTGTGGTCCTGATCATCTT
CCTGATTAAGCGAATCTAAG

Downstream 100 bases:

>100_bases
TTGTTGACAGCCTTTCCGGGCGGCGATGACGGTTTCCGTAAGCTCTTTTACCATTGTTGGGGGGAGCTTTGATGCCAACA
GAACAGGAACAGAACAACCA

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; FOG TPR Repeat; Tetratricopeptide TPR_2 Repeat Protein

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKFIRQITGIVLVTAGCASTTPQVDSLNLRSVIPQETEISGVPFIEQSEGHCGPATLTMALHWAGNSVPLSTVTSQVYTP
GMKGSLQTDMISGARRQGMMAVPVTGVQNLLREVRGGHPVIVFENLAVSWLPQWHYAIVYGFDPVREEVILHSGPEAGKR
WDIRKFERSWKLGDYWGLVVLPAGQLSVTASERAHVTAAAALEALGKNSEAETAYQSILARWPQSLAAYVGLGNIHYSRK
QYSLAINNLQKATHLQPESAVAWYNLTMAQAALGHTSEARKSAKEALRWAAPESKKLYAQNLRSFLDGP

Sequences:

>Translated_309_residues
MKFIRQITGIVLVTAGCASTTPQVDSLNLRSVIPQETEISGVPFIEQSEGHCGPATLTMALHWAGNSVPLSTVTSQVYTP
GMKGSLQTDMISGARRQGMMAVPVTGVQNLLREVRGGHPVIVFENLAVSWLPQWHYAIVYGFDPVREEVILHSGPEAGKR
WDIRKFERSWKLGDYWGLVVLPAGQLSVTASERAHVTAAAALEALGKNSEAETAYQSILARWPQSLAAYVGLGNIHYSRK
QYSLAINNLQKATHLQPESAVAWYNLTMAQAALGHTSEARKSAKEALRWAAPESKKLYAQNLRSFLDGP
>Mature_309_residues
MKFIRQITGIVLVTAGCASTTPQVDSLNLRSVIPQETEISGVPFIEQSEGHCGPATLTMALHWAGNSVPLSTVTSQVYTP
GMKGSLQTDMISGARRQGMMAVPVTGVQNLLREVRGGHPVIVFENLAVSWLPQWHYAIVYGFDPVREEVILHSGPEAGKR
WDIRKFERSWKLGDYWGLVVLPAGQLSVTASERAHVTAAAALEALGKNSEAETAYQSILARWPQSLAAYVGLGNIHYSRK
QYSLAINNLQKATHLQPESAVAWYNLTMAQAALGHTSEARKSAKEALRWAAPESKKLYAQNLRSFLDGP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33776; Mature: 33776

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFIRQITGIVLVTAGCASTTPQVDSLNLRSVIPQETEISGVPFIEQSEGHCGPATLTMA
CCHHHHHHCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEECCCCCCCCEEEEEE
LHWAGNSVPLSTVTSQVYTPGMKGSLQTDMISGARRQGMMAVPVTGVQNLLREVRGGHPV
EEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEECHHHHHHHHHHHCCCCCE
IVFENLAVSWLPQWHYAIVYGFDPVREEVILHSGPEAGKRWDIRKFERSWKLGDYWGLVV
EEECCCHHHHCCCCEEEEEECCCHHHHHHEECCCCCCCCCCCHHHHHHCCCCCCEEEEEE
LPAGQLSVTASERAHVTAAAALEALGKNSEAETAYQSILARWPQSLAAYVGLGNIHYSRK
ECCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCH
QYSLAINNLQKATHLQPESAVAWYNLTMAQAALGHTSEARKSAKEALRWAAPESKKLYAQ
HHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHH
NLRSFLDGP
HHHHHHCCC
>Mature Secondary Structure
MKFIRQITGIVLVTAGCASTTPQVDSLNLRSVIPQETEISGVPFIEQSEGHCGPATLTMA
CCHHHHHHCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCCCCCCEECCCCCCCCEEEEEE
LHWAGNSVPLSTVTSQVYTPGMKGSLQTDMISGARRQGMMAVPVTGVQNLLREVRGGHPV
EEECCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEECHHHHHHHHHHHCCCCCE
IVFENLAVSWLPQWHYAIVYGFDPVREEVILHSGPEAGKRWDIRKFERSWKLGDYWGLVV
EEECCCHHHHCCCCEEEEEECCCHHHHHHEECCCCCCCCCCCHHHHHHCCCCCCEEEEEE
LPAGQLSVTASERAHVTAAAALEALGKNSEAETAYQSILARWPQSLAAYVGLGNIHYSRK
ECCCCEEEECCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEECCH
QYSLAINNLQKATHLQPESAVAWYNLTMAQAALGHTSEARKSAKEALRWAAPESKKLYAQ
HHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHH
NLRSFLDGP
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA