Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522870

Identifier: 42522870

GI number: 42522870

Start: 1276398

End: 1276913

Strand: Direct

Name: 42522870

Synonym: Bd1351

Alternate gene names: NA

Gene position: 1276398-1276913 (Clockwise)

Preceding gene: 42522869

Following gene: 42522872

Centisome position: 33.74

GC content: 46.12

Gene sequence:

>516_bases
ATGAAAAGAGTCTTGTTGGCAACTGTCTTAATTTTGAACTTCTCCGTTTTCCACGCCCACGCGAACCTGCTGCCTTTCAC
TCAGGATGTTAACGTCGGTGAGAACTCCGTCGCGGTTTCAAAAATTAAGTTTAGCAAACGCGCTGACGCCGGTTCATTCT
GTCACACTCTGGGCAAACAACTTGGCTTGAATATGAAACTGGCGGACCTTGAAGAGGTTATACAAGTTGCGGCATTCGGC
AAACCCCAAGTGGACAGTGTGATGGTGCAGATTAAAAAGAAAGATGGCTCTGTTGATACAGCTATCGTCGCCTGGGACAA
CAAGAAAAAGATCAAAATCGACAAAGAGAATCCAGCGAACGTTGATACTCATCTCGTACTTAGAATTCGTGGCGGCGACG
GCGTCGTTAGGGAAACAACCCTCAAAGAACTGAAAGAGTTAGGGGCCGTCGACTATCAGGATCGACCTATTGATAAGCTT
CCGGCCTTTTGCGTTCACGATATTAAAAAACAATAG

Upstream 100 bases:

>100_bases
CGCCTTTTGGCGCCTTCGACAGTTCTTGCCGTGTATAAACAAGCTTTATTGCAGTTGATGCTGGAATGACTCTCGCAGTG
TAAATGGGCAGAGGTGCCCT

Downstream 100 bases:

>100_bases
CCGGGCTATTTACAGTGCGCCTTTGAGCTAAGAACAAGCGCCCGCGCTTGTTCTTCTGTGCTGGCGGTGCCAATTGAGCA
GGTATCCGCCCCATCCAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKRVLLATVLILNFSVFHAHANLLPFTQDVNVGENSVAVSKIKFSKRADAGSFCHTLGKQLGLNMKLADLEEVIQVAAFG
KPQVDSVMVQIKKKDGSVDTAIVAWDNKKKIKIDKENPANVDTHLVLRIRGGDGVVRETTLKELKELGAVDYQDRPIDKL
PAFCVHDIKKQ

Sequences:

>Translated_171_residues
MKRVLLATVLILNFSVFHAHANLLPFTQDVNVGENSVAVSKIKFSKRADAGSFCHTLGKQLGLNMKLADLEEVIQVAAFG
KPQVDSVMVQIKKKDGSVDTAIVAWDNKKKIKIDKENPANVDTHLVLRIRGGDGVVRETTLKELKELGAVDYQDRPIDKL
PAFCVHDIKKQ
>Mature_171_residues
MKRVLLATVLILNFSVFHAHANLLPFTQDVNVGENSVAVSKIKFSKRADAGSFCHTLGKQLGLNMKLADLEEVIQVAAFG
KPQVDSVMVQIKKKDGSVDTAIVAWDNKKKIKIDKENPANVDTHLVLRIRGGDGVVRETTLKELKELGAVDYQDRPIDKL
PAFCVHDIKKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18915; Mature: 18915

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVLLATVLILNFSVFHAHANLLPFTQDVNVGENSVAVSKIKFSKRADAGSFCHTLGKQ
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH
LGLNMKLADLEEVIQVAAFGKPQVDSVMVQIKKKDGSVDTAIVAWDNKKKIKIDKENPAN
HCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEECCCCCC
VDTHLVLRIRGGDGVVRETTLKELKELGAVDYQDRPIDKLPAFCVHDIKKQ
CCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRVLLATVLILNFSVFHAHANLLPFTQDVNVGENSVAVSKIKFSKRADAGSFCHTLGKQ
CCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHH
LGLNMKLADLEEVIQVAAFGKPQVDSVMVQIKKKDGSVDTAIVAWDNKKKIKIDKENPAN
HCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEEEEECCCCEEEEECCCCCC
VDTHLVLRIRGGDGVVRETTLKELKELGAVDYQDRPIDKLPAFCVHDIKKQ
CCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA