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The map label for this gene is 42522826

Identifier: 42522826

GI number: 42522826

Start: 1233104

End: 1233544

Strand: Direct

Name: 42522826

Synonym: Bd1304

Alternate gene names: NA

Gene position: 1233104-1233544 (Clockwise)

Preceding gene: 42522825

Following gene: 42522827

Centisome position: 32.6

GC content: 56.24

Gene sequence:

>441_bases
ATGAATAAAACATCCATGAAACAAACCGCGGCCGCTTTTGTGGTGGGCTTGATCTTTGCGATTGGGCTGGGAGTTTCCGG
CATGACTCAGCCCCAGAAGGTCATTGGTTTTCTGCAGCTGGGTGAGGGCTGGGATCCGTCACTTATGTTTGTCATGATCG
GAGCCATCCCGGTTCATATGCTGAGTTACCGTTGGATGAAAGGGCATCGCACACCTTTGTTGGACACTCAGTGGCACGTG
CCGGCGTCCAAGGAAGTCACCCGGCCCCTGGTGGTCGGAAGTGCTTTGTTCGGTTTGGGCTGGGGCTTGGGCGGATTTTG
CCCGGGTCCGGCGCTGACGTCTGCTGGAGCCGGTCAGGAGATGGCAATCTATTTTGTGATCGCGATGCTTGCGGGAATGG
GGCTGTATCGCCTGTACGCCCGCTTTACTGTGAAAGGGTGA

Upstream 100 bases:

>100_bases
ATAGCGCGCTTTTCTGTGCGCTCGCTGGTGGCCACCGCGACGTTCATGATTTTGGGAATGCTGACGGCAACACTCTTTAA
GGCACTGGTGGGAGGCTGAT

Downstream 100 bases:

>100_bases
GGTGTTTTTTATGGAACTGTTGGGTTATTTAGGTGCCAGTCTGGTCGGAGTGTCGTTAGGTCTTCTGGGCGGAGGCGGTG
CGATTCTGGCGGTTCCGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 146

Protein sequence:

>146_residues
MNKTSMKQTAAAFVVGLIFAIGLGVSGMTQPQKVIGFLQLGEGWDPSLMFVMIGAIPVHMLSYRWMKGHRTPLLDTQWHV
PASKEVTRPLVVGSALFGLGWGLGGFCPGPALTSAGAGQEMAIYFVIAMLAGMGLYRLYARFTVKG

Sequences:

>Translated_146_residues
MNKTSMKQTAAAFVVGLIFAIGLGVSGMTQPQKVIGFLQLGEGWDPSLMFVMIGAIPVHMLSYRWMKGHRTPLLDTQWHV
PASKEVTRPLVVGSALFGLGWGLGGFCPGPALTSAGAGQEMAIYFVIAMLAGMGLYRLYARFTVKG
>Mature_146_residues
MNKTSMKQTAAAFVVGLIFAIGLGVSGMTQPQKVIGFLQLGEGWDPSLMFVMIGAIPVHMLSYRWMKGHRTPLLDTQWHV
PASKEVTRPLVVGSALFGLGWGLGGFCPGPALTSAGAGQEMAIYFVIAMLAGMGLYRLYARFTVKG

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 15651; Mature: 15651

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKTSMKQTAAAFVVGLIFAIGLGVSGMTQPQKVIGFLQLGEGWDPSLMFVMIGAIPVHM
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LSYRWMKGHRTPLLDTQWHVPASKEVTRPLVVGSALFGLGWGLGGFCPGPALTSAGAGQE
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
MAIYFVIAMLAGMGLYRLYARFTVKG
HHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNKTSMKQTAAAFVVGLIFAIGLGVSGMTQPQKVIGFLQLGEGWDPSLMFVMIGAIPVHM
CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
LSYRWMKGHRTPLLDTQWHVPASKEVTRPLVVGSALFGLGWGLGGFCPGPALTSAGAGQE
HHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCH
MAIYFVIAMLAGMGLYRLYARFTVKG
HHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12533478 [H]