Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522775

Identifier: 42522775

GI number: 42522775

Start: 1185440

End: 1186060

Strand: Direct

Name: 42522775

Synonym: Bd1248

Alternate gene names: NA

Gene position: 1185440-1186060 (Clockwise)

Preceding gene: 42522773

Following gene: 42522780

Centisome position: 31.34

GC content: 48.15

Gene sequence:

>621_bases
ATGAAAAAGATTTTGGGTATTTTTGCTGTTCTCTTCGCTGTTGGTTGCTCAAAACTTGGTGAAGATCCCAGCTTGTCGGA
AGAGTCGCTGGAAGGTGGTCAATGGATCGCGTTTTGTTTTGGCGGCAATTCCGGCTGGGAAACTCGTAAAGCCCGCTATG
ATGGCACGAACTATGTGGAAAGTGTTGAAGTGTCAGCTGATAGCTACTGCAATCAACCTGCCTATAGCATTGAAGAACAG
GGGACATATCTTGTTGGAGATAAGTTGAGTGGAGGCTTGATGCGAAAACTGGATCGAACGTTGACCAGCATTAAGATCAC
ACCCTTGTCGGGTTTGGGTGTAAGCAATCTGAATAGCGGCTCCGTGTGTGGCTTCACTGACTGGACGATCAATGTGGCTC
GTGAGGTCACCGGGCTGTATTGCAATGGGTCCGTTCCCCCTGCGAATACGACTTACTATGACCTTTATTTAATTTTCCCG
CTTTCGATTGATGATCCGGAAGATCCCATTGCCAAAGGAGATTTGAACTTTGGTTTCCGCTGGGGTGGAAATGACGGAAG
CACGGAAGAGACCAGACCGGACTCAGTGACGGCGCCGAATTTTAAAAGGCATCCGCTTTAA

Upstream 100 bases:

>100_bases
GTGGGGAGAGTGTTTTAAATTGAAACATTGTTGTGCCGCTTTGGGATCTGTAAATAAAAATTGATTTAAGGCTTATCGAG
GCTGCGCCGAAATTCTTTTC

Downstream 100 bases:

>100_bases
ATTGCGGATCGTAACTTTTCAACAGCGGCGTGTCGGCGTGGGGAAGACGGCCGTTGTTCATCCATTTCAAGATATCCTGC
ACCAACAGTACATCCATCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 206

Protein sequence:

>206_residues
MKKILGIFAVLFAVGCSKLGEDPSLSEESLEGGQWIAFCFGGNSGWETRKARYDGTNYVESVEVSADSYCNQPAYSIEEQ
GTYLVGDKLSGGLMRKLDRTLTSIKITPLSGLGVSNLNSGSVCGFTDWTINVAREVTGLYCNGSVPPANTTYYDLYLIFP
LSIDDPEDPIAKGDLNFGFRWGGNDGSTEETRPDSVTAPNFKRHPL

Sequences:

>Translated_206_residues
MKKILGIFAVLFAVGCSKLGEDPSLSEESLEGGQWIAFCFGGNSGWETRKARYDGTNYVESVEVSADSYCNQPAYSIEEQ
GTYLVGDKLSGGLMRKLDRTLTSIKITPLSGLGVSNLNSGSVCGFTDWTINVAREVTGLYCNGSVPPANTTYYDLYLIFP
LSIDDPEDPIAKGDLNFGFRWGGNDGSTEETRPDSVTAPNFKRHPL
>Mature_206_residues
MKKILGIFAVLFAVGCSKLGEDPSLSEESLEGGQWIAFCFGGNSGWETRKARYDGTNYVESVEVSADSYCNQPAYSIEEQ
GTYLVGDKLSGGLMRKLDRTLTSIKITPLSGLGVSNLNSGSVCGFTDWTINVAREVTGLYCNGSVPPANTTYYDLYLIFP
LSIDDPEDPIAKGDLNFGFRWGGNDGSTEETRPDSVTAPNFKRHPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22378; Mature: 22378

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKILGIFAVLFAVGCSKLGEDPSLSEESLEGGQWIAFCFGGNSGWETRKARYDGTNYVE
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEEECCCCCCCCEEECCCCCCEE
SVEVSADSYCNQPAYSIEEQGTYLVGDKLSGGLMRKLDRTLTSIKITPLSGLGVSNLNSG
EEEECCHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCCC
SVCGFTDWTINVAREVTGLYCNGSVPPANTTYYDLYLIFPLSIDDPEDPIAKGDLNFGFR
CEEEECCCEEEEEHHCEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEE
WGGNDGSTEETRPDSVTAPNFKRHPL
ECCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKKILGIFAVLFAVGCSKLGEDPSLSEESLEGGQWIAFCFGGNSGWETRKARYDGTNYVE
CHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEEECCCCCCCCEEECCCCCCEE
SVEVSADSYCNQPAYSIEEQGTYLVGDKLSGGLMRKLDRTLTSIKITPLSGLGVSNLNSG
EEEECCHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCCC
SVCGFTDWTINVAREVTGLYCNGSVPPANTTYYDLYLIFPLSIDDPEDPIAKGDLNFGFR
CEEEECCCEEEEEHHCEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEE
WGGNDGSTEETRPDSVTAPNFKRHPL
ECCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA