| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522775
Identifier: 42522775
GI number: 42522775
Start: 1185440
End: 1186060
Strand: Direct
Name: 42522775
Synonym: Bd1248
Alternate gene names: NA
Gene position: 1185440-1186060 (Clockwise)
Preceding gene: 42522773
Following gene: 42522780
Centisome position: 31.34
GC content: 48.15
Gene sequence:
>621_bases ATGAAAAAGATTTTGGGTATTTTTGCTGTTCTCTTCGCTGTTGGTTGCTCAAAACTTGGTGAAGATCCCAGCTTGTCGGA AGAGTCGCTGGAAGGTGGTCAATGGATCGCGTTTTGTTTTGGCGGCAATTCCGGCTGGGAAACTCGTAAAGCCCGCTATG ATGGCACGAACTATGTGGAAAGTGTTGAAGTGTCAGCTGATAGCTACTGCAATCAACCTGCCTATAGCATTGAAGAACAG GGGACATATCTTGTTGGAGATAAGTTGAGTGGAGGCTTGATGCGAAAACTGGATCGAACGTTGACCAGCATTAAGATCAC ACCCTTGTCGGGTTTGGGTGTAAGCAATCTGAATAGCGGCTCCGTGTGTGGCTTCACTGACTGGACGATCAATGTGGCTC GTGAGGTCACCGGGCTGTATTGCAATGGGTCCGTTCCCCCTGCGAATACGACTTACTATGACCTTTATTTAATTTTCCCG CTTTCGATTGATGATCCGGAAGATCCCATTGCCAAAGGAGATTTGAACTTTGGTTTCCGCTGGGGTGGAAATGACGGAAG CACGGAAGAGACCAGACCGGACTCAGTGACGGCGCCGAATTTTAAAAGGCATCCGCTTTAA
Upstream 100 bases:
>100_bases GTGGGGAGAGTGTTTTAAATTGAAACATTGTTGTGCCGCTTTGGGATCTGTAAATAAAAATTGATTTAAGGCTTATCGAG GCTGCGCCGAAATTCTTTTC
Downstream 100 bases:
>100_bases ATTGCGGATCGTAACTTTTCAACAGCGGCGTGTCGGCGTGGGGAAGACGGCCGTTGTTCATCCATTTCAAGATATCCTGC ACCAACAGTACATCCATCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MKKILGIFAVLFAVGCSKLGEDPSLSEESLEGGQWIAFCFGGNSGWETRKARYDGTNYVESVEVSADSYCNQPAYSIEEQ GTYLVGDKLSGGLMRKLDRTLTSIKITPLSGLGVSNLNSGSVCGFTDWTINVAREVTGLYCNGSVPPANTTYYDLYLIFP LSIDDPEDPIAKGDLNFGFRWGGNDGSTEETRPDSVTAPNFKRHPL
Sequences:
>Translated_206_residues MKKILGIFAVLFAVGCSKLGEDPSLSEESLEGGQWIAFCFGGNSGWETRKARYDGTNYVESVEVSADSYCNQPAYSIEEQ GTYLVGDKLSGGLMRKLDRTLTSIKITPLSGLGVSNLNSGSVCGFTDWTINVAREVTGLYCNGSVPPANTTYYDLYLIFP LSIDDPEDPIAKGDLNFGFRWGGNDGSTEETRPDSVTAPNFKRHPL >Mature_206_residues MKKILGIFAVLFAVGCSKLGEDPSLSEESLEGGQWIAFCFGGNSGWETRKARYDGTNYVESVEVSADSYCNQPAYSIEEQ GTYLVGDKLSGGLMRKLDRTLTSIKITPLSGLGVSNLNSGSVCGFTDWTINVAREVTGLYCNGSVPPANTTYYDLYLIFP LSIDDPEDPIAKGDLNFGFRWGGNDGSTEETRPDSVTAPNFKRHPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22378; Mature: 22378
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILGIFAVLFAVGCSKLGEDPSLSEESLEGGQWIAFCFGGNSGWETRKARYDGTNYVE CHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEEECCCCCCCCEEECCCCCCEE SVEVSADSYCNQPAYSIEEQGTYLVGDKLSGGLMRKLDRTLTSIKITPLSGLGVSNLNSG EEEECCHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCCC SVCGFTDWTINVAREVTGLYCNGSVPPANTTYYDLYLIFPLSIDDPEDPIAKGDLNFGFR CEEEECCCEEEEEHHCEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEE WGGNDGSTEETRPDSVTAPNFKRHPL ECCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKKILGIFAVLFAVGCSKLGEDPSLSEESLEGGQWIAFCFGGNSGWETRKARYDGTNYVE CHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEEECCCCCCCCEEECCCCCCEE SVEVSADSYCNQPAYSIEEQGTYLVGDKLSGGLMRKLDRTLTSIKITPLSGLGVSNLNSG EEEECCHHHCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHEEEEECCCCCCCCCCCCC SVCGFTDWTINVAREVTGLYCNGSVPPANTTYYDLYLIFPLSIDDPEDPIAKGDLNFGFR CEEEECCCEEEEEHHCEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEE WGGNDGSTEETRPDSVTAPNFKRHPL ECCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA