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The map label for this gene is 42522772

Identifier: 42522772

GI number: 42522772

Start: 1178180

End: 1179118

Strand: Direct

Name: 42522772

Synonym: Bd1243

Alternate gene names: NA

Gene position: 1178180-1179118 (Clockwise)

Preceding gene: 42522771

Following gene: 42522773

Centisome position: 31.14

GC content: 53.46

Gene sequence:

>939_bases
ATGATCATCCCTTGCCCGGAAGACTTTAAAGACTATTCCAAGTACCCGCTGACGATCACGCTGGCGGTGCTGAATGTCTT
TATTTTTATTCTGATCTTCAGCGGGGTGAACTCGGGTCTGACTTCCTCACCGGTGTTGCAAAAAGACGGGCTGGTTCTGA
CGGGCAGGTTGTACTACCAGTATCTGCAAAACATCCCGGCCGAGATTCTTTATGAAAAGCCCCAGTGGGTGCATCAGATG
AGTTCGGGCAATACCGAACAGATGGGGATTCTGGGGGCCTTTGCACTGAGAGACAGTCGCTTTCTGGAACAGGCTGAAGC
CGGCGTCTATCGCGGTGACGAAGTGCAGATCGCTGCCTGGAAAAAGAACATCACTGAATTCCGCAAAAAGTATCAGGAAC
AACTGCTGTATCGCTTCGGGCTGAGTTCCGGGGCGAAGGGGCCTCTTTCCTGGCTGACTTATCAGTTCTCTCATTCAAAT
TGGATGCATCTGCTTTCGAATCTGGGTTTCCTGGTATTGCTGGGGGCGGCAGTCGAAGTGATGGCTGGAAGCTGGGTGCT
TTTGTTTGTCTATATGGTGGGGGGCATGGCCGGGGGCCTGGGCTTCCTGTTGTCTGATACTCACGGAACTGTGCCGATGG
TGGGGGCGAGTGCCTCGATCAGTGCGCTTTTGGCATTTTATTGTGTAGCCGAAACTCGAATGCGAGTGAAGTTTCTATAT
TTTGCATCGCCGATGCCAGGGCATTATGGCGCGATTTATTTGCCGACCCTGCTGATCATACCTTTGTTCCTGGTCGTCGA
TCTGGCGAACCTGTGGGCGATTCCTGAAGGCCTTGGCGGCGGCGTTGCTTACGCGGCCCACCTGGGTGGCAGCTTGTTTG
GCACCATGCTGGGGCTGATTTACCGCGCGAAATCCACACCGATTCTGACTCCATCCTGA

Upstream 100 bases:

>100_bases
CCGAGCTGGTCCCGCAAAGTGGCAATGGCGGCCGTATGCCGGCAAGCGCTGCTGAACAGGAAAGCTGGATTGACGACTTC
AAAGAACGTTACGAGGTTCC

Downstream 100 bases:

>100_bases
CTCTGTAATTTCTATATACCCGTTGACAGAAACGTTACCGGTGAGACACATTACCGTCCAGAGGCTGGAGATCACCCCCA
ACGTTGAAATGGCGGACCCG

Product: putative integral membrane protein

Products: NA

Alternate protein names: Integral Membrane Protein

Number of amino acids: Translated: 312; Mature: 312

Protein sequence:

>312_residues
MIIPCPEDFKDYSKYPLTITLAVLNVFIFILIFSGVNSGLTSSPVLQKDGLVLTGRLYYQYLQNIPAEILYEKPQWVHQM
SSGNTEQMGILGAFALRDSRFLEQAEAGVYRGDEVQIAAWKKNITEFRKKYQEQLLYRFGLSSGAKGPLSWLTYQFSHSN
WMHLLSNLGFLVLLGAAVEVMAGSWVLLFVYMVGGMAGGLGFLLSDTHGTVPMVGASASISALLAFYCVAETRMRVKFLY
FASPMPGHYGAIYLPTLLIIPLFLVVDLANLWAIPEGLGGGVAYAAHLGGSLFGTMLGLIYRAKSTPILTPS

Sequences:

>Translated_312_residues
MIIPCPEDFKDYSKYPLTITLAVLNVFIFILIFSGVNSGLTSSPVLQKDGLVLTGRLYYQYLQNIPAEILYEKPQWVHQM
SSGNTEQMGILGAFALRDSRFLEQAEAGVYRGDEVQIAAWKKNITEFRKKYQEQLLYRFGLSSGAKGPLSWLTYQFSHSN
WMHLLSNLGFLVLLGAAVEVMAGSWVLLFVYMVGGMAGGLGFLLSDTHGTVPMVGASASISALLAFYCVAETRMRVKFLY
FASPMPGHYGAIYLPTLLIIPLFLVVDLANLWAIPEGLGGGVAYAAHLGGSLFGTMLGLIYRAKSTPILTPS
>Mature_312_residues
MIIPCPEDFKDYSKYPLTITLAVLNVFIFILIFSGVNSGLTSSPVLQKDGLVLTGRLYYQYLQNIPAEILYEKPQWVHQM
SSGNTEQMGILGAFALRDSRFLEQAEAGVYRGDEVQIAAWKKNITEFRKKYQEQLLYRFGLSSGAKGPLSWLTYQFSHSN
WMHLLSNLGFLVLLGAAVEVMAGSWVLLFVYMVGGMAGGLGFLLSDTHGTVPMVGASASISALLAFYCVAETRMRVKFLY
FASPMPGHYGAIYLPTLLIIPLFLVVDLANLWAIPEGLGGGVAYAAHLGGSLFGTMLGLIYRAKSTPILTPS

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34250; Mature: 34250

Theoretical pI: Translated: 8.17; Mature: 8.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIPCPEDFKDYSKYPLTITLAVLNVFIFILIFSGVNSGLTSSPVLQKDGLVLTGRLYYQ
CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHH
YLQNIPAEILYEKPQWVHQMSSGNTEQMGILGAFALRDSRFLEQAEAGVYRGDEVQIAAW
HHHCCCHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHH
KKNITEFRKKYQEQLLYRFGLSSGAKGPLSWLTYQFSHSNWMHLLSNLGFLVLLGAAVEV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEECCCHHHHHHHCCHHHHHHHHHHHH
MAGSWVLLFVYMVGGMAGGLGFLLSDTHGTVPMVGASASISALLAFYCVAETRMRVKFLY
HHCCHHHHHHHHHHHHCCCHHHEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHEEEEEE
FASPMPGHYGAIYLPTLLIIPLFLVVDLANLWAIPEGLGGGVAYAAHLGGSLFGTMLGLI
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHH
YRAKSTPILTPS
HHCCCCCCCCCC
>Mature Secondary Structure
MIIPCPEDFKDYSKYPLTITLAVLNVFIFILIFSGVNSGLTSSPVLQKDGLVLTGRLYYQ
CCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHH
YLQNIPAEILYEKPQWVHQMSSGNTEQMGILGAFALRDSRFLEQAEAGVYRGDEVQIAAW
HHHCCCHHHHCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHH
KKNITEFRKKYQEQLLYRFGLSSGAKGPLSWLTYQFSHSNWMHLLSNLGFLVLLGAAVEV
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHEEEEECCCHHHHHHHCCHHHHHHHHHHHH
MAGSWVLLFVYMVGGMAGGLGFLLSDTHGTVPMVGASASISALLAFYCVAETRMRVKFLY
HHCCHHHHHHHHHHHHCCCHHHEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHEEEEEE
FASPMPGHYGAIYLPTLLIIPLFLVVDLANLWAIPEGLGGGVAYAAHLGGSLFGTMLGLI
EECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCHHHHHHHHHHH
YRAKSTPILTPS
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA