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The map label for this gene is ctpA [H]

Identifier: 42522769

GI number: 42522769

Start: 1174923

End: 1176128

Strand: Direct

Name: ctpA [H]

Synonym: Bd1239

Alternate gene names: 42522769

Gene position: 1174923-1176128 (Clockwise)

Preceding gene: 42522768

Following gene: 42522770

Centisome position: 31.06

GC content: 52.9

Gene sequence:

>1206_bases
ATGACGCGGATCTTTGCAATTCTTCTGGCAGTCTCCTGCGCCTACGGGGCGTATCATTTCACTCTGCAACGCGGATTCGT
GAATCCGTATCCGGCAGTGTGTGATCTTGTCGCGGAAAGAATCTTTCTGGACGACAGCAAAATAAAAAACTGGAAAAAGA
CCTGCAGTCGGCGCAGCCGTCTGGTCACTCCGTATTCTCCGAAAAAACTGATCATCAAGGACATGAATAATGCCCTGGCG
TTGCTGAAAGTGTCGCACCTGGAAGTTTACGATTCTTCTGAAGTGGCCAGCATCTGGCGCGGAGAAAGTCTTGAAACCGG
CATTGAAAGCCGTTTTGTCGACGGGGAACTGGTCATTTATAAAATTCATCCTGATTCTCCGGCGCAGGAGGCGGGTTTGA
AACCCGGTGATGTCATTCAAAGCATCAATGCCGAGCAGCCCAATCCCTGGGAGGCGCAGACCGAGCAGGGCTCGTACCTG
ATGCTTCGTCAGGACAAGGAATTTTCTGTGAAAATCAAACCTCGCTCCATCCAGCGGTCCGAGGATCTGAATCTTGAAAT
CAAATCCGCGCAAAAGGCGGTGCTGGAAATTCCGTCTTTCCGCGCGACTTTCTTTGAAGAAGAAAAGTTGAAAACGCTGC
AACAGCAAATCGCACCGTTAAGCAAGCTGGTGGTGGACCTGCGGGGAAACCCCGGTGGGAACTTTGTCGCGGGCCTGCGT
TTTCTTTCGTTGTTCATGTGCAAGGCCGAAGAAGTCGGGCGCTTGGTGAAACCCCGTGCGCCGGTGAAGACACCTGCCGA
GCTTCCCAATGACTTGAGAGATCAGGAACAACTGGCCGTGCTTGATAACAGCAGCGAGATTTTGTTGAAGACTTACGACA
ACCCCCAGTGCTTTAAAGGCGAGGTGCGGGTGCTGGTCGATGGGAAAAGCTCTTCTGTGGCTGAAATGGTCGCGCAGGCT
TTGAAAGAGTTTAAAAAAGCACCGTTGCTGGGAAGCCCCAGTCGCGGGCAGTTGCTGGTCGGTGTCTGGTATCCTCTGGA
CGAGGTCGGGCCAGGAGTGCAGATCTCTATCCCCGAGGCGATCTACTTAAGTCACAAGCAGCATCAAATCGAGGGGCAGG
GTGTGGCTTTGGATCGGGTCTTGTACTACAGCCTCCCGGAAATGCAGGCGGGGATTGATTCTTGGGTGAAAAAGGCCCTC
GACTAG

Upstream 100 bases:

>100_bases
GCGGCTCGCAAGAAGAAAGTGGCTGCTTAATTCTTCCTTTTGAATTGAAAAGCAAAGACCGGATGAACAAACATCCGGTC
TTTGTTATTACAGGACCGAG

Downstream 100 bases:

>100_bases
AGTCCCGGATGTATGGCGTTTGTCGTCTCACAGTGAGATGATCATAATAATACGTCAAACATCTTTTGTACGTCTGTTCA
GGCTCTGAGCAGCTAGAATG

Product: carboxy-terminal processing protease

Products: NA

Alternate protein names: C-terminal-processing protease [H]

Number of amino acids: Translated: 401; Mature: 400

Protein sequence:

>401_residues
MTRIFAILLAVSCAYGAYHFTLQRGFVNPYPAVCDLVAERIFLDDSKIKNWKKTCSRRSRLVTPYSPKKLIIKDMNNALA
LLKVSHLEVYDSSEVASIWRGESLETGIESRFVDGELVIYKIHPDSPAQEAGLKPGDVIQSINAEQPNPWEAQTEQGSYL
MLRQDKEFSVKIKPRSIQRSEDLNLEIKSAQKAVLEIPSFRATFFEEEKLKTLQQQIAPLSKLVVDLRGNPGGNFVAGLR
FLSLFMCKAEEVGRLVKPRAPVKTPAELPNDLRDQEQLAVLDNSSEILLKTYDNPQCFKGEVRVLVDGKSSSVAEMVAQA
LKEFKKAPLLGSPSRGQLLVGVWYPLDEVGPGVQISIPEAIYLSHKQHQIEGQGVALDRVLYYSLPEMQAGIDSWVKKAL
D

Sequences:

>Translated_401_residues
MTRIFAILLAVSCAYGAYHFTLQRGFVNPYPAVCDLVAERIFLDDSKIKNWKKTCSRRSRLVTPYSPKKLIIKDMNNALA
LLKVSHLEVYDSSEVASIWRGESLETGIESRFVDGELVIYKIHPDSPAQEAGLKPGDVIQSINAEQPNPWEAQTEQGSYL
MLRQDKEFSVKIKPRSIQRSEDLNLEIKSAQKAVLEIPSFRATFFEEEKLKTLQQQIAPLSKLVVDLRGNPGGNFVAGLR
FLSLFMCKAEEVGRLVKPRAPVKTPAELPNDLRDQEQLAVLDNSSEILLKTYDNPQCFKGEVRVLVDGKSSSVAEMVAQA
LKEFKKAPLLGSPSRGQLLVGVWYPLDEVGPGVQISIPEAIYLSHKQHQIEGQGVALDRVLYYSLPEMQAGIDSWVKKAL
D
>Mature_400_residues
TRIFAILLAVSCAYGAYHFTLQRGFVNPYPAVCDLVAERIFLDDSKIKNWKKTCSRRSRLVTPYSPKKLIIKDMNNALAL
LKVSHLEVYDSSEVASIWRGESLETGIESRFVDGELVIYKIHPDSPAQEAGLKPGDVIQSINAEQPNPWEAQTEQGSYLM
LRQDKEFSVKIKPRSIQRSEDLNLEIKSAQKAVLEIPSFRATFFEEEKLKTLQQQIAPLSKLVVDLRGNPGGNFVAGLRF
LSLFMCKAEEVGRLVKPRAPVKTPAELPNDLRDQEQLAVLDNSSEILLKTYDNPQCFKGEVRVLVDGKSSSVAEMVAQAL
KEFKKAPLLGSPSRGQLLVGVWYPLDEVGPGVQISIPEAIYLSHKQHQIEGQGVALDRVLYYSLPEMQAGIDSWVKKALD

Specific function: Involved in protection of the bacterium from thermal and osmotic stresses (Potential) [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 44842; Mature: 44711

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRIFAILLAVSCAYGAYHFTLQRGFVNPYPAVCDLVAERIFLDDSKIKNWKKTCSRRSR
CHHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
LVTPYSPKKLIIKDMNNALALLKVSHLEVYDSSEVASIWRGESLETGIESRFVDGELVIY
CCCCCCCCCHHHHHCCCCEEEEEEEEEEEECCCHHHHHHCCCCHHCCHHHEECCCEEEEE
KIHPDSPAQEAGLKPGDVIQSINAEQPNPWEAQTEQGSYLMLRQDKEFSVKIKPRSIQRS
EECCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCC
EDLNLEIKSAQKAVLEIPSFRATFFEEEKLKTLQQQIAPLSKLVVDLRGNPGGNFVAGLR
CCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHH
FLSLFMCKAEEVGRLVKPRAPVKTPAELPNDLRDQEQLAVLDNSSEILLKTYDNPQCFKG
HHHHHHHCHHHHHHHCCCCCCCCCCHHCCHHHCCCHHEEEECCCCEEEEEECCCCCCCCC
EVRVLVDGKSSSVAEMVAQALKEFKKAPLLGSPSRGQLLVGVWYPLDEVGPGVQISIPEA
CEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHCCCCEEEECCHH
IYLSHKQHQIEGQGVALDRVLYYSLPEMQAGIDSWVKKALD
EEECCHHHCCCCCCEEEHHHHHHCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TRIFAILLAVSCAYGAYHFTLQRGFVNPYPAVCDLVAERIFLDDSKIKNWKKTCSRRSR
HHHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHC
LVTPYSPKKLIIKDMNNALALLKVSHLEVYDSSEVASIWRGESLETGIESRFVDGELVIY
CCCCCCCCCHHHHHCCCCEEEEEEEEEEEECCCHHHHHHCCCCHHCCHHHEECCCEEEEE
KIHPDSPAQEAGLKPGDVIQSINAEQPNPWEAQTEQGSYLMLRQDKEFSVKIKPRSIQRS
EECCCCCHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCCCCC
EDLNLEIKSAQKAVLEIPSFRATFFEEEKLKTLQQQIAPLSKLVVDLRGNPGGNFVAGLR
CCCCEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHH
FLSLFMCKAEEVGRLVKPRAPVKTPAELPNDLRDQEQLAVLDNSSEILLKTYDNPQCFKG
HHHHHHHCHHHHHHHCCCCCCCCCCHHCCHHHCCCHHEEEECCCCEEEEEECCCCCCCCC
EVRVLVDGKSSSVAEMVAQALKEFKKAPLLGSPSRGQLLVGVWYPLDEVGPGVQISIPEA
CEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHCCCCEEEECCHH
IYLSHKQHQIEGQGVALDRVLYYSLPEMQAGIDSWVKKALD
EEECCHHHCCCCCCEEEHHHHHHCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9141685 [H]