| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is hisC
Identifier: 42522616
GI number: 42522616
Start: 1006897
End: 1008015
Strand: Direct
Name: hisC
Synonym: Bd1061
Alternate gene names: 42522616
Gene position: 1006897-1008015 (Clockwise)
Preceding gene: 42522611
Following gene: 42522617
Centisome position: 26.62
GC content: 48.7
Gene sequence:
>1119_bases GTGAAGATTTCTCCCGAAATTTTGAATCTGGTGCCCTACAAACCTGGAAAGCCGATTTCCGAGACCCAACGTGAGTACGG GCTCACAACGGTCTACAAACTCGCAAGTAACGAGAATCCTTTGGGTCCCAGCCCGAAAGCCATGGCGGCAGTGAAGCAGG CTTTGGATCATCAGCACCTGTATCCGGATCCATCCCACTATGAGCTTTTGCAGACTTTGTCGAAAGAATGGGGCTTCCCG ACAAAACAACTTGCTATTGGTAACGGCAGCGACGAGCTGATTGATCTGTTGTGCCGTATCTACTGTGAGCACCATGACGG CGTTTTGACATCTGCGGCAGCGTTTAATGCTTATGAAGTCAGCGCTCCGGCCAACCGTGCGGTGATCCACAAAGTTCCCA TGGCTGAAGGCTATCGTTTCGATCTGCCAGCCATTGCGGATTATTTCCTGAAACACCCGGAAAAAAACATCCGTTTGATT TTTGTCTCTAATCCCAACAATCCTACCGGTACTTACGCGACCAAAGCGGAAGTGGAGGCTTTCCTTCAGAAAGTCGGTAA CCGCGACGATGTGATGATTATTTTTGATGAAGCCTATAACGAATTTGTGCGTGCCAAAGACTATGCTTCCGCACAAGGGT ACATGGGGCAGTATAAGAACCTGATTGTTCTTCGCACTTTCTCCAAAATCTATGGCCTGGCGGGTTTCCGCCTGGGTGCG ATGATCGCGCCGCCCGAGGTTGTGGAAGTCTTTAACCGTGTGCGCAAACCATTTAATGTCAACGATTTAGCGCAAGTGGC TGCAAATGCGGCTCTGCAAGATAAAGAATTTATTGAGCGATCGCAGCAGATTTGCTGGAAAGGGCTTGATTACTTCTACA AGAAGTTAGAAGAATTAGGCCTGCCTTACATTCCATCTCAGGGAAATTTTGTCATGTTTGACACCCTCCGTGACGCCGCC AAGGTGAACGAAGCGTTGTTACGTCGCGGAATTATTATGAGACCTCTATTGAACTATGGGTTCAAGACGCATCTGCGTTT GAGTGTAGGGCGCGATCATGAAAATGAGGCAGCAATGGTTGCCTTGGCGGAAGTTCTAAAAGAAATCACTCCGCTGTAG
Upstream 100 bases:
>100_bases TGCATTTTCGAACGCTCTCTATTGAATTTGCTCTGGAATGTTGTTAAGTCTTAGTCGGACAGGTATAGCAAAGTATTCTC TCTAAGAAAAGGATTCTAAA
Downstream 100 bases:
>100_bases TTTTGGAGAATTATGGGAATGGTAATTACGATTGATGGCCCTGCGGCCTCCGGAAAATCTTCAGTAAGTCGTGAGCTGGC TCGTCGTTTGGGCTGGCAGT
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MKISPEILNLVPYKPGKPISETQREYGLTTVYKLASNENPLGPSPKAMAAVKQALDHQHLYPDPSHYELLQTLSKEWGFP TKQLAIGNGSDELIDLLCRIYCEHHDGVLTSAAAFNAYEVSAPANRAVIHKVPMAEGYRFDLPAIADYFLKHPEKNIRLI FVSNPNNPTGTYATKAEVEAFLQKVGNRDDVMIIFDEAYNEFVRAKDYASAQGYMGQYKNLIVLRTFSKIYGLAGFRLGA MIAPPEVVEVFNRVRKPFNVNDLAQVAANAALQDKEFIERSQQICWKGLDYFYKKLEELGLPYIPSQGNFVMFDTLRDAA KVNEALLRRGIIMRPLLNYGFKTHLRLSVGRDHENEAAMVALAEVLKEITPL
Sequences:
>Translated_372_residues MKISPEILNLVPYKPGKPISETQREYGLTTVYKLASNENPLGPSPKAMAAVKQALDHQHLYPDPSHYELLQTLSKEWGFP TKQLAIGNGSDELIDLLCRIYCEHHDGVLTSAAAFNAYEVSAPANRAVIHKVPMAEGYRFDLPAIADYFLKHPEKNIRLI FVSNPNNPTGTYATKAEVEAFLQKVGNRDDVMIIFDEAYNEFVRAKDYASAQGYMGQYKNLIVLRTFSKIYGLAGFRLGA MIAPPEVVEVFNRVRKPFNVNDLAQVAANAALQDKEFIERSQQICWKGLDYFYKKLEELGLPYIPSQGNFVMFDTLRDAA KVNEALLRRGIIMRPLLNYGFKTHLRLSVGRDHENEAAMVALAEVLKEITPL >Mature_372_residues MKISPEILNLVPYKPGKPISETQREYGLTTVYKLASNENPLGPSPKAMAAVKQALDHQHLYPDPSHYELLQTLSKEWGFP TKQLAIGNGSDELIDLLCRIYCEHHDGVLTSAAAFNAYEVSAPANRAVIHKVPMAEGYRFDLPAIADYFLKHPEKNIRLI FVSNPNNPTGTYATKAEVEAFLQKVGNRDDVMIIFDEAYNEFVRAKDYASAQGYMGQYKNLIVLRTFSKIYGLAGFRLGA MIAPPEVVEVFNRVRKPFNVNDLAQVAANAALQDKEFIERSQQICWKGLDYFYKKLEELGLPYIPSQGNFVMFDTLRDAA KVNEALLRRGIIMRPLLNYGFKTHLRLSVGRDHENEAAMVALAEVLKEITPL
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=366, Percent_Identity=27.8688524590164, Blast_Score=119, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6322075, Length=395, Percent_Identity=27.8481012658228, Blast_Score=122, Evalue=9e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_BDEBA (P60998)
Other databases:
- EMBL: BX842648 - RefSeq: NP_967996.1 - ProteinModelPortal: P60998 - SMR: P60998 - GeneID: 2734881 - GenomeReviews: BX842601_GR - KEGG: bba:Bd1061 - NMPDR: fig|264462.1.peg.966 - HOGENOM: HBG646350 - OMA: ASNESHY - PhylomeDB: P60998 - BioCyc: BBAC264462:BD1061-MONOMER - BRENDA: 2.6.1.9 - HAMAP: MF_01023 - InterPro: IPR001176 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - PRINTS: PR00753 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 41903; Mature: 41903
Theoretical pI: Translated: 7.30; Mature: 7.30
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKISPEILNLVPYKPGKPISETQREYGLTTVYKLASNENPLGPSPKAMAAVKQALDHQHL CCCCHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC YPDPSHYELLQTLSKEWGFPTKQLAIGNGSDELIDLLCRIYCEHHDGVLTSAAAFNAYEV CCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCEEE SAPANRAVIHKVPMAEGYRFDLPAIADYFLKHPEKNIRLIFVSNPNNPTGTYATKAEVEA CCCCCCCEEEECCCCCCCEECCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHH FLQKVGNRDDVMIIFDEAYNEFVRAKDYASAQGYMGQYKNLIVLRTFSKIYGLAGFRLGA HHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHCC MIAPPEVVEVFNRVRKPFNVNDLAQVAANAALQDKEFIERSQQICWKGLDYFYKKLEELG CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC LPYIPSQGNFVMFDTLRDAAKVNEALLRRGIIMRPLLNYGFKTHLRLSVGRDHENEAAMV CCCCCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEEECCCCCCHHHHH ALAEVLKEITPL HHHHHHHHHCCC >Mature Secondary Structure MKISPEILNLVPYKPGKPISETQREYGLTTVYKLASNENPLGPSPKAMAAVKQALDHQHL CCCCHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCC YPDPSHYELLQTLSKEWGFPTKQLAIGNGSDELIDLLCRIYCEHHDGVLTSAAAFNAYEV CCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHCCCEEE SAPANRAVIHKVPMAEGYRFDLPAIADYFLKHPEKNIRLIFVSNPNNPTGTYATKAEVEA CCCCCCCEEEECCCCCCCEECCHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHH FLQKVGNRDDVMIIFDEAYNEFVRAKDYASAQGYMGQYKNLIVLRTFSKIYGLAGFRLGA HHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHHHCC MIAPPEVVEVFNRVRKPFNVNDLAQVAANAALQDKEFIERSQQICWKGLDYFYKKLEELG CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC LPYIPSQGNFVMFDTLRDAAKVNEALLRRGIIMRPLLNYGFKTHLRLSVGRDHENEAAMV CCCCCCCCCEEEEHHHHHHHHHHHHHHHCCHHHHHHHHCCCEEEEEEEECCCCCCHHHHH ALAEVLKEITPL HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA