| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522539
Identifier: 42522539
GI number: 42522539
Start: 923985
End: 924773
Strand: Direct
Name: 42522539
Synonym: Bd0977
Alternate gene names: NA
Gene position: 923985-924773 (Clockwise)
Preceding gene: 42522538
Following gene: 42522544
Centisome position: 24.42
GC content: 48.16
Gene sequence:
>789_bases ATGAGAAAATACATCGCTTTACTTGCCGGATTGATGTTGTCAGCCTTTGCCGAAGCCAAGGTGCTTGTGGTGTCTGATAT TGATGACACGTTGAAGGTGTCCCACGTGTTGTCCAAGAAGGGGGCTGCAACCTCATTTGCTGACGATGACAGCCGCTTTG TGGGTATGTCGGAAATCTTCCAGATGTTAAATCTGCAGCATGAAGACATTGAATTCCATTATGTGTCTTTGGCTCCAAAG CTTTTGATGAACGAGCAGCACACGGATTTCCTGGAGGAAAACGGCTTCCCGATCACGAAGCTGCACATGAACTCGGGTAT CAAGCAGGATCCTGAGTTGAAACAAAAAGTCATCCGCAAGGTGCTTGCTGAAACCAATCCGGAAGTCGTGATCTATTTCG GCGACAACGGTCAGTTCGATGCGGTTGTTTATGACCAGATGGTCAAAGAGTTTCCGCACATCCCGGCGGTCAGCTATATC CGTGAGGCTTATTCCAGACTGGATCGTTCCAAGTTCCCAACAATGGAAGGCCAGATTGGCTTCGTGACGAGTGTTGAGGT CGCGATTGACCTGATTTCAAAAGGTCTTTTGATGAAGAAGGCCTATGGCCCGATTGAGCAGATCGTTTACAAGCGCATGA AGAAAGACGACAAAGACGAAAAGTTCGGTCCCATGGTCTTCCCATGGTGGCAGGACTGCCGCGACTTCAAATGGCAGTGG GATGTAATGAATCCTTCTGTGAAACTTCAGAAGATCCAGTCTGTGATTGCTGAAAGATGTGCGCAGTAA
Upstream 100 bases:
>100_bases GGAAGAGCGTTCCGAGGTCGCAGACAAGATTCTGTCGGTCGACTGGGAGCAGATTTACGATTCAATCTTTTTAGGAAACA AAAAATAACAGGAGACGTCC
Downstream 100 bases:
>100_bases TTTTGATAGAACAGTGAAAAAGAAAAAGGGGCTTCAAAGCCCCTTTTTTATTTCTGTCCGCTGCCTGATCTTGATGGCAT TGGAGGAGGTGGAGGTTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MRKYIALLAGLMLSAFAEAKVLVVSDIDDTLKVSHVLSKKGAATSFADDDSRFVGMSEIFQMLNLQHEDIEFHYVSLAPK LLMNEQHTDFLEENGFPITKLHMNSGIKQDPELKQKVIRKVLAETNPEVVIYFGDNGQFDAVVYDQMVKEFPHIPAVSYI REAYSRLDRSKFPTMEGQIGFVTSVEVAIDLISKGLLMKKAYGPIEQIVYKRMKKDDKDEKFGPMVFPWWQDCRDFKWQW DVMNPSVKLQKIQSVIAERCAQ
Sequences:
>Translated_262_residues MRKYIALLAGLMLSAFAEAKVLVVSDIDDTLKVSHVLSKKGAATSFADDDSRFVGMSEIFQMLNLQHEDIEFHYVSLAPK LLMNEQHTDFLEENGFPITKLHMNSGIKQDPELKQKVIRKVLAETNPEVVIYFGDNGQFDAVVYDQMVKEFPHIPAVSYI REAYSRLDRSKFPTMEGQIGFVTSVEVAIDLISKGLLMKKAYGPIEQIVYKRMKKDDKDEKFGPMVFPWWQDCRDFKWQW DVMNPSVKLQKIQSVIAERCAQ >Mature_262_residues MRKYIALLAGLMLSAFAEAKVLVVSDIDDTLKVSHVLSKKGAATSFADDDSRFVGMSEIFQMLNLQHEDIEFHYVSLAPK LLMNEQHTDFLEENGFPITKLHMNSGIKQDPELKQKVIRKVLAETNPEVVIYFGDNGQFDAVVYDQMVKEFPHIPAVSYI REAYSRLDRSKFPTMEGQIGFVTSVEVAIDLISKGLLMKKAYGPIEQIVYKRMKKDDKDEKFGPMVFPWWQDCRDFKWQW DVMNPSVKLQKIQSVIAERCAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30093; Mature: 30093
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKYIALLAGLMLSAFAEAKVLVVSDIDDTLKVSHVLSKKGAATSFADDDSRFVGMSEIF CHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHH QMLNLQHEDIEFHYVSLAPKLLMNEQHTDFLEENGFPITKLHMNSGIKQDPELKQKVIRK HHHCCCCCCCEEEEHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHH VLAETNPEVVIYFGDNGQFDAVVYDQMVKEFPHIPAVSYIREAYSRLDRSKFPTMEGQIG HHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC FVTSVEVAIDLISKGLLMKKAYGPIEQIVYKRMKKDDKDEKFGPMVFPWWQDCRDFKWQW CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCEEE DVMNPSVKLQKIQSVIAERCAQ EECCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MRKYIALLAGLMLSAFAEAKVLVVSDIDDTLKVSHVLSKKGAATSFADDDSRFVGMSEIF CHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCEECHHHHH QMLNLQHEDIEFHYVSLAPKLLMNEQHTDFLEENGFPITKLHMNSGIKQDPELKQKVIRK HHHCCCCCCCEEEEHHHHHHHHHCCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHH VLAETNPEVVIYFGDNGQFDAVVYDQMVKEFPHIPAVSYIREAYSRLDRSKFPTMEGQIG HHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC FVTSVEVAIDLISKGLLMKKAYGPIEQIVYKRMKKDDKDEKFGPMVFPWWQDCRDFKWQW CHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCEEE DVMNPSVKLQKIQSVIAERCAQ EECCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA