Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522537

Identifier: 42522537

GI number: 42522537

Start: 922427

End: 923266

Strand: Direct

Name: 42522537

Synonym: Bd0975

Alternate gene names: NA

Gene position: 922427-923266 (Clockwise)

Preceding gene: 42522536

Following gene: 42522538

Centisome position: 24.38

GC content: 50.0

Gene sequence:

>840_bases
ATGAAAAAAGAAATGTCCCACAGAAAAAAGGTCCGCCGTCGTGTGAATAAAAAAAGCACGGCTTTGGTATTCGATAAATA
CGAACTGTACCGCAAAGCGGTTCAGTCGGCGGAAAATGATGTGGTCTTTATCTGGAACACGTTCCGCGAGCTGAAAGGCA
AGCAGCCCCGTGTATTCCGTGAAGACTTCTGCGGGACCTTTGCTCTTTCCACCGAATGGATCAAACTGCACCCTCGTCAT
GAGGCGGTGGGTGTGGATCTGGATCCGGAACCAATGGCCTACGGCAAAGCCAACTATCTGACGAAGCTGAAGCCGGAACA
GCAAAAGCGCATGAAGCTGGTGGAAGGCAACGTGCTGGATCCGAATCTGGCCAAAGCTGACATTGTGGCGGCGATGAATT
TCTCTTATTTCTGTTTTAAAAAACGCGACGTTTTGAAGAAGTATTTCGCCAATGTGCTGAAGACTTTGAACAAAGACGGC
ATGTTCCTGGTGGATATCTTCGGCGGCAGTCAGTGCTACGAAGCCATCGAGGACGCGATCAAACACGAAGGCTTCACTTA
CTACTGGGATCAAACGAACTTTGACCCTGTGACCAATGAGGCTCTATTCCACATCCACTTCAAAGTGGGTGGGAAAAAGA
TCGAACAGGTCTTCACCTATGACTGGCGCATGTGGTCCATCTCTGAGATCCGCGACATCATGGAAGAAGTGGGCTTTAAA
AAGTCCCACGTGTACTGGGAAGGTACGGCTCCGGATGGTTCCGGAGACGGCAACTTCACCCGTGTGGATCACGGCGAAGC
TTGTCAGTCCTGGATCGCTTATGTGGTCGGAGAAAAATAG

Upstream 100 bases:

>100_bases
GCCGGGCATCGGTCTGCACCCGAACCTTGAAAAGAACTCTGTGCCACAGATCCATGACATTGAACTTGCGATTCGTGAAG
TCGTAGCGGAAGTGCCGTAA

Downstream 100 bases:

>100_bases
CGCCGGTTGGTGAAAAAGGCCCATCTCCTTCGTTGTCGGGCCTTTTGCTTCTCTTCGACGTGCTTGGAGCACGCCTCCGT
TTCGCAAAAAACCCTCCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKKEMSHRKKVRRRVNKKSTALVFDKYELYRKAVQSAENDVVFIWNTFRELKGKQPRVFREDFCGTFALSTEWIKLHPRH
EAVGVDLDPEPMAYGKANYLTKLKPEQQKRMKLVEGNVLDPNLAKADIVAAMNFSYFCFKKRDVLKKYFANVLKTLNKDG
MFLVDIFGGSQCYEAIEDAIKHEGFTYYWDQTNFDPVTNEALFHIHFKVGGKKIEQVFTYDWRMWSISEIRDIMEEVGFK
KSHVYWEGTAPDGSGDGNFTRVDHGEACQSWIAYVVGEK

Sequences:

>Translated_279_residues
MKKEMSHRKKVRRRVNKKSTALVFDKYELYRKAVQSAENDVVFIWNTFRELKGKQPRVFREDFCGTFALSTEWIKLHPRH
EAVGVDLDPEPMAYGKANYLTKLKPEQQKRMKLVEGNVLDPNLAKADIVAAMNFSYFCFKKRDVLKKYFANVLKTLNKDG
MFLVDIFGGSQCYEAIEDAIKHEGFTYYWDQTNFDPVTNEALFHIHFKVGGKKIEQVFTYDWRMWSISEIRDIMEEVGFK
KSHVYWEGTAPDGSGDGNFTRVDHGEACQSWIAYVVGEK
>Mature_279_residues
MKKEMSHRKKVRRRVNKKSTALVFDKYELYRKAVQSAENDVVFIWNTFRELKGKQPRVFREDFCGTFALSTEWIKLHPRH
EAVGVDLDPEPMAYGKANYLTKLKPEQQKRMKLVEGNVLDPNLAKADIVAAMNFSYFCFKKRDVLKKYFANVLKTLNKDG
MFLVDIFGGSQCYEAIEDAIKHEGFTYYWDQTNFDPVTNEALFHIHFKVGGKKIEQVFTYDWRMWSISEIRDIMEEVGFK
KSHVYWEGTAPDGSGDGNFTRVDHGEACQSWIAYVVGEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32548; Mature: 32548

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEMSHRKKVRRRVNKKSTALVFDKYELYRKAVQSAENDVVFIWNTFRELKGKQPRVFR
CCCHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHCCCCCEEEEEECHHHHCCCCCCHHH
EDFCGTFALSTEWIKLHPRHEAVGVDLDPEPMAYGKANYLTKLKPEQQKRMKLVEGNVLD
HHCCCEEEECCCEEEECCCCCEECCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHCCCCCC
PNLAKADIVAAMNFSYFCFKKRDVLKKYFANVLKTLNKDGMFLVDIFGGSQCYEAIEDAI
CCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHH
KHEGFTYYWDQTNFDPVTNEALFHIHFKVGGKKIEQVFTYDWRMWSISEIRDIMEEVGFK
HHCCCEEEECCCCCCCCCCCEEEEEEEEECCHHHHHHHHHCCEEECHHHHHHHHHHCCCC
KSHVYWEGTAPDGSGDGNFTRVDHGEACQSWIAYVVGEK
CCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKEMSHRKKVRRRVNKKSTALVFDKYELYRKAVQSAENDVVFIWNTFRELKGKQPRVFR
CCCHHHHHHHHHHHHCCCHHEEEEHHHHHHHHHHHCCCCCEEEEEECHHHHCCCCCCHHH
EDFCGTFALSTEWIKLHPRHEAVGVDLDPEPMAYGKANYLTKLKPEQQKRMKLVEGNVLD
HHCCCEEEECCCEEEECCCCCEECCCCCCCCCCCCCCCHHCCCCCHHHHHHHHHCCCCCC
PNLAKADIVAAMNFSYFCFKKRDVLKKYFANVLKTLNKDGMFLVDIFGGSQCYEAIEDAI
CCCHHHHHHHHCCCEEEEEHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHH
KHEGFTYYWDQTNFDPVTNEALFHIHFKVGGKKIEQVFTYDWRMWSISEIRDIMEEVGFK
HHCCCEEEECCCCCCCCCCCEEEEEEEEECCHHHHHHHHHCCEEECHHHHHHHHHHCCCC
KSHVYWEGTAPDGSGDGNFTRVDHGEACQSWIAYVVGEK
CCEEEEECCCCCCCCCCCEEECCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA