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The map label for this gene is yhgF [C]

Identifier: 42522520

GI number: 42522520

Start: 899133

End: 901475

Strand: Direct

Name: yhgF [C]

Synonym: Bd0954

Alternate gene names: 42522520

Gene position: 899133-901475 (Clockwise)

Preceding gene: 42522519

Following gene: 42522521

Centisome position: 23.77

GC content: 50.11

Gene sequence:

>2343_bases
ATGGATCAGGCTCTTCAGAGTTATTTGGCTCGTATTGCTCCCACCGTTTCCGCAAAGTCAGCACAGGCTGTGATCGAACT
TGCGGCTGAAGGGGCAACCGTTCCGTTCATCGCACGTTACCGTAAAGAGAAAACCGGCAATTTGGACGAGGTCCAAATCC
GCGCGGTTATCGAAGGTCACGAAACTTACAACGAAATCGTCAAACGTAAGGCGTTCCTGATTAAAGAAATCGGCGAACAA
AACAACCTGACGGCAGAAATCCAGAAGCGTATCGAGCTTTCCTGGGATCTGGGCGAGTTGGAAGAAATCTACAAACCATT
CAAAAAGAAAAAGAAAACCAAGGCGACCATCGCACGCGAAGCGGGTCTGGAGCCTTTGGCAAACTGGATCTGGGATATGG
GCCATGGCACGATCAAAGACGATCAGACCATGGAGATGAAGGCGAAAAACTTCCTCAATCCAACTGCAAAAATCGCAACC
TACGAAGAAGCGCTTAAAGGCGCTCAGGACATCATCGTCGAGAAAATCGCCAATGATGCGGAACTTCGTGCGATGGTGGC
GAAAAACTACAACGACAGCGGTCGTGTGGTGGCCAAAGCAGCCAAAGGCTACAAAGCAAACTCCAAGTACGAAATGTACA
AGGAATTTGAAGAGCCGGTTAAGAATCTGATGGATGCGAAAAACAATCACCGCTATCTGGCGATGAGACGTGGCTGGCAG
GAAGAAGAGCTGACCGTTGACGTAAAAGGCGACGACGAAGCTATTTTGAAATCCTATGAAAACTTCGCAACATCCACTCC
GGACAATGCGATCGGCGACTACCTGAAACAGTGTGCTCGTCTGGCATTGAACGTTTACGTTCTTCCATCTGTTGTGAACG
AAGTTCACCGTCAGTTGAAAGAAAAAGCGGATCAGGATGCGATCACGGTCTTTGCTGAAAACGTGCGTAAGCTTTTGCTG
GCGTCCCCGTACGGACCAAAATGTGTATTGGGCGTGGATCCTGGTTTGAGAACAGGCTGTAAAGTGGCTCTGATCGACAA
ATCCGGCGCATTCATTTCTCACACGGTTCTTTACACTTTGGGTGACGATGCTGACAGAAAAGCAAAAGTTCTGTTCGGCG
ACGTGATGAAGCAGATCCAGATCGAGGCGATTGCTGTCGGTAACGGAACTGCCGGTCGTGAGACTGAGGCCTTCCTGAAG
AAAGTCCTGAAAGATCTGGGTAAAAACATCCCGGTTGTGATGGTTTCTGAGTCCGGAGCTTCCGTGTACTCGGCTTCTGA
AGTAGCTCGTGAAGAATTCCCGGATCTGGATGTGACTGTAAAAGGGGCGATCTCTATCGCGCGCCGTTTGCAGGATCCGT
TGGCAGAGCTGGTTAAAGTTGATCCTAAATCCATCGGCGTTGGTCAGTACCAGCACGATGTGAATCAGTCCCAGTTGAAG
AAATCCCTGGAAGCAGTGGTCGAGTCCTGCGTGAATAACGTGGGTGTGGACGTGAATACGGCTTCAGCAGCGCTTCTTTC
CCATGTGGCGGGTATCGGCCCGGCCTTGGCGAAAGGGATCGTTGAAGCTCGTAAGAAATCCCTGTTCAACGACCGTACTG
AGCTTTTGAAAGTTCCTAAGTTCTCTGCAAAAGTTTTCGAACAGGCAGCAGGTTTCTTGAGAATCCCACAAAGCAAACAG
GTTCTGGATTCCACAGGTATTCACCCTGAGCGTTACCAGGCGGTGACGGACATGGCGAAGGACCTGGGTGTGTCTTTGAC
TGACGTTATCGGCGAAGGCGCAAAAAAACTGGTTTCCCAAAGATCCAAATGGGCTCAACTGGTGGGTGAGTTCACCTTTG
ATGACATCGTAAAAGAACTGGAAAAACCAGGCCGCGATCCGCGTGATCCGTTCAAAGTATTCCAGTTCCGTGATGACATC
ATGGAAGTGAAGGATCTGACTGAAGGTATGATCTGCCCGGGTATCGTGACGAATGTGACCAACTTCGGTGCGTTCGTGGA
CATTGGTGTTCACCAGGATGGTCTGGTGCATATCTCTGCATTGTCTCACAAGTTCGTGGATGACCCTCGTAAAGTGGTAA
ACCCAGGTGACCATGTGACAGTGAAGGTTCTGAAAGTGGATGTGGTTAAAAACCAGATCTCTTTGACGATGAAGATGGAC
GATGCTCCGGAGGCTTCTGCACCTCGTGGTGAAAGACGTCCGGAAAACCGTGGTGCTTCCCGCCCAATGGGTCAGGGTCA
GCGTCCGCCGGCGGGCAAACCAGCTCAGGCTCCAATGAAACCTGCAAACCCGTTCAACAACCCGTTTGCAGCTTTGATGA
ATGTTCCGACAAATAAGAAATAA

Upstream 100 bases:

>100_bases
GGGTTTCTCCTTACGACCCATCTCATGGCTTGATCCAATTCCGTCATAAATAATACCGATTTAATTCCTTCTAACATTTC
CAATTAAATCTAGAGGTTCT

Downstream 100 bases:

>100_bases
TAAGGAGAACTAAAATGGCAGCAAAAGGTAAATCCAGAAAAGGTATCCGTCACAGAAAAAAACGCATCTTGACCAAGAAG
CGCATGTACAAAGCGAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 780; Mature: 780

Protein sequence:

>780_residues
MDQALQSYLARIAPTVSAKSAQAVIELAAEGATVPFIARYRKEKTGNLDEVQIRAVIEGHETYNEIVKRKAFLIKEIGEQ
NNLTAEIQKRIELSWDLGELEEIYKPFKKKKKTKATIAREAGLEPLANWIWDMGHGTIKDDQTMEMKAKNFLNPTAKIAT
YEEALKGAQDIIVEKIANDAELRAMVAKNYNDSGRVVAKAAKGYKANSKYEMYKEFEEPVKNLMDAKNNHRYLAMRRGWQ
EEELTVDVKGDDEAILKSYENFATSTPDNAIGDYLKQCARLALNVYVLPSVVNEVHRQLKEKADQDAITVFAENVRKLLL
ASPYGPKCVLGVDPGLRTGCKVALIDKSGAFISHTVLYTLGDDADRKAKVLFGDVMKQIQIEAIAVGNGTAGRETEAFLK
KVLKDLGKNIPVVMVSESGASVYSASEVAREEFPDLDVTVKGAISIARRLQDPLAELVKVDPKSIGVGQYQHDVNQSQLK
KSLEAVVESCVNNVGVDVNTASAALLSHVAGIGPALAKGIVEARKKSLFNDRTELLKVPKFSAKVFEQAAGFLRIPQSKQ
VLDSTGIHPERYQAVTDMAKDLGVSLTDVIGEGAKKLVSQRSKWAQLVGEFTFDDIVKELEKPGRDPRDPFKVFQFRDDI
MEVKDLTEGMICPGIVTNVTNFGAFVDIGVHQDGLVHISALSHKFVDDPRKVVNPGDHVTVKVLKVDVVKNQISLTMKMD
DAPEASAPRGERRPENRGASRPMGQGQRPPAGKPAQAPMKPANPFNNPFAALMNVPTNKK

Sequences:

>Translated_780_residues
MDQALQSYLARIAPTVSAKSAQAVIELAAEGATVPFIARYRKEKTGNLDEVQIRAVIEGHETYNEIVKRKAFLIKEIGEQ
NNLTAEIQKRIELSWDLGELEEIYKPFKKKKKTKATIAREAGLEPLANWIWDMGHGTIKDDQTMEMKAKNFLNPTAKIAT
YEEALKGAQDIIVEKIANDAELRAMVAKNYNDSGRVVAKAAKGYKANSKYEMYKEFEEPVKNLMDAKNNHRYLAMRRGWQ
EEELTVDVKGDDEAILKSYENFATSTPDNAIGDYLKQCARLALNVYVLPSVVNEVHRQLKEKADQDAITVFAENVRKLLL
ASPYGPKCVLGVDPGLRTGCKVALIDKSGAFISHTVLYTLGDDADRKAKVLFGDVMKQIQIEAIAVGNGTAGRETEAFLK
KVLKDLGKNIPVVMVSESGASVYSASEVAREEFPDLDVTVKGAISIARRLQDPLAELVKVDPKSIGVGQYQHDVNQSQLK
KSLEAVVESCVNNVGVDVNTASAALLSHVAGIGPALAKGIVEARKKSLFNDRTELLKVPKFSAKVFEQAAGFLRIPQSKQ
VLDSTGIHPERYQAVTDMAKDLGVSLTDVIGEGAKKLVSQRSKWAQLVGEFTFDDIVKELEKPGRDPRDPFKVFQFRDDI
MEVKDLTEGMICPGIVTNVTNFGAFVDIGVHQDGLVHISALSHKFVDDPRKVVNPGDHVTVKVLKVDVVKNQISLTMKMD
DAPEASAPRGERRPENRGASRPMGQGQRPPAGKPAQAPMKPANPFNNPFAALMNVPTNKK
>Mature_780_residues
MDQALQSYLARIAPTVSAKSAQAVIELAAEGATVPFIARYRKEKTGNLDEVQIRAVIEGHETYNEIVKRKAFLIKEIGEQ
NNLTAEIQKRIELSWDLGELEEIYKPFKKKKKTKATIAREAGLEPLANWIWDMGHGTIKDDQTMEMKAKNFLNPTAKIAT
YEEALKGAQDIIVEKIANDAELRAMVAKNYNDSGRVVAKAAKGYKANSKYEMYKEFEEPVKNLMDAKNNHRYLAMRRGWQ
EEELTVDVKGDDEAILKSYENFATSTPDNAIGDYLKQCARLALNVYVLPSVVNEVHRQLKEKADQDAITVFAENVRKLLL
ASPYGPKCVLGVDPGLRTGCKVALIDKSGAFISHTVLYTLGDDADRKAKVLFGDVMKQIQIEAIAVGNGTAGRETEAFLK
KVLKDLGKNIPVVMVSESGASVYSASEVAREEFPDLDVTVKGAISIARRLQDPLAELVKVDPKSIGVGQYQHDVNQSQLK
KSLEAVVESCVNNVGVDVNTASAALLSHVAGIGPALAKGIVEARKKSLFNDRTELLKVPKFSAKVFEQAAGFLRIPQSKQ
VLDSTGIHPERYQAVTDMAKDLGVSLTDVIGEGAKKLVSQRSKWAQLVGEFTFDDIVKELEKPGRDPRDPFKVFQFRDDI
MEVKDLTEGMICPGIVTNVTNFGAFVDIGVHQDGLVHISALSHKFVDDPRKVVNPGDHVTVKVLKVDVVKNQISLTMKMD
DAPEASAPRGERRPENRGASRPMGQGQRPPAGKPAQAPMKPANPFNNPFAALMNVPTNKK

Specific function: Unknown

COG id: COG2183

COG function: function code K; Transcriptional accessory protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

Organism=Homo sapiens, GI221136781, Length=799, Percent_Identity=30.7884856070088, Blast_Score=323, Evalue=4e-88,
Organism=Homo sapiens, GI27597090, Length=505, Percent_Identity=23.3663366336634, Blast_Score=96, Evalue=9e-20,
Organism=Escherichia coli, GI87082262, Length=763, Percent_Identity=43.7745740498034, Blast_Score=558, Evalue=1e-160,
Organism=Escherichia coli, GI1787140, Length=82, Percent_Identity=48.780487804878, Blast_Score=77, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17511129, Length=763, Percent_Identity=27.916120576671, Blast_Score=229, Evalue=5e-60,
Organism=Caenorhabditis elegans, GI17552892, Length=195, Percent_Identity=31.7948717948718, Blast_Score=87, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6321552, Length=379, Percent_Identity=25.3298153034301, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI62484314, Length=768, Percent_Identity=31.25, Blast_Score=314, Evalue=2e-85,
Organism=Drosophila melanogaster, GI24640080, Length=749, Percent_Identity=21.2283044058745, Blast_Score=108, Evalue=2e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR022967
- InterPro:   IPR018974
- InterPro:   IPR023097 [H]

Pfam domain/function: PF00575 S1; PF09371 Tex_N [H]

EC number: NA

Molecular weight: Translated: 85843; Mature: 85843

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: PS50126 S1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQALQSYLARIAPTVSAKSAQAVIELAAEGATVPFIARYRKEKTGNLDEVQIRAVIEGH
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEEHHHH
ETYNEIVKRKAFLIKEIGEQNNLTAEIQKRIELSWDLGELEEIYKPFKKKKKTKATIARE
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGLEPLANWIWDMGHGTIKDDQTMEMKAKNFLNPTAKIATYEEALKGAQDIIVEKIANDA
CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCHH
ELRAMVAKNYNDSGRVVAKAAKGYKANSKYEMYKEFEEPVKNLMDAKNNHRYLAMRRGWQ
HHHHHHHCCCCCCCCEEEEHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
EEELTVDVKGDDEAILKSYENFATSTPDNAIGDYLKQCARLALNVYVLPSVVNEVHRQLK
CCCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKADQDAITVFAENVRKLLLASPYGPKCVLGVDPGLRTGCKVALIDKSGAFISHTVLYTL
HHCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCEEEEEEEEEE
GDDADRKAKVLFGDVMKQIQIEAIAVGNGTAGRETEAFLKKVLKDLGKNIPVVMVSESGA
CCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC
SVYSASEVAREEFPDLDVTVKGAISIARRLQDPLAELVKVDPKSIGVGQYQHDVNQSQLK
CHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHH
KSLEAVVESCVNNVGVDVNTASAALLSHVAGIGPALAKGIVEARKKSLFNDRTELLKVPK
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCC
FSAKVFEQAAGFLRIPQSKQVLDSTGIHPERYQAVTDMAKDLGVSLTDVIGEGAKKLVSQ
HHHHHHHHCCCCEECCCCHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RSKWAQLVGEFTFDDIVKELEKPGRDPRDPFKVFQFRDDIMEVKDLTEGMICPGIVTNVT
HHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
NFGAFVDIGVHQDGLVHISALSHKFVDDPRKVVNPGDHVTVKVLKVDVVKNQISLTMKMD
HCCCEEEECCCCCCCEEHHHHHHHHHCCCHHHCCCCCCEEEEEEEEEEHHCEEEEEEEEC
DAPEASAPRGERRPENRGASRPMGQGQRPPAGKPAQAPMKPANPFNNPFAALMNVPTNKK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC
>Mature Secondary Structure
MDQALQSYLARIAPTVSAKSAQAVIELAAEGATVPFIARYRKEKTGNLDEVQIRAVIEGH
CCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEEEEHHHH
ETYNEIVKRKAFLIKEIGEQNNLTAEIQKRIELSWDLGELEEIYKPFKKKKKTKATIARE
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
AGLEPLANWIWDMGHGTIKDDQTMEMKAKNFLNPTAKIATYEEALKGAQDIIVEKIANDA
CCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCHH
ELRAMVAKNYNDSGRVVAKAAKGYKANSKYEMYKEFEEPVKNLMDAKNNHRYLAMRRGWQ
HHHHHHHCCCCCCCCEEEEHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCC
EEELTVDVKGDDEAILKSYENFATSTPDNAIGDYLKQCARLALNVYVLPSVVNEVHRQLK
CCCEEEEECCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EKADQDAITVFAENVRKLLLASPYGPKCVLGVDPGLRTGCKVALIDKSGAFISHTVLYTL
HHCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEEECCCCEEEEEEEEEE
GDDADRKAKVLFGDVMKQIQIEAIAVGNGTAGRETEAFLKKVLKDLGKNIPVVMVSESGA
CCCCCCHHHHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCC
SVYSASEVAREEFPDLDVTVKGAISIARRLQDPLAELVKVDPKSIGVGQYQHDVNQSQLK
CHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHHHH
KSLEAVVESCVNNVGVDVNTASAALLSHVAGIGPALAKGIVEARKKSLFNDRTELLKVPK
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHCCC
FSAKVFEQAAGFLRIPQSKQVLDSTGIHPERYQAVTDMAKDLGVSLTDVIGEGAKKLVSQ
HHHHHHHHCCCCEECCCCHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
RSKWAQLVGEFTFDDIVKELEKPGRDPRDPFKVFQFRDDIMEVKDLTEGMICPGIVTNVT
HHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
NFGAFVDIGVHQDGLVHISALSHKFVDDPRKVVNPGDHVTVKVLKVDVVKNQISLTMKMD
HCCCEEEECCCCCCCEEHHHHHHHHHCCCHHHCCCCCCEEEEEEEEEEHHCEEEEEEEEC
DAPEASAPRGERRPENRGASRPMGQGQRPPAGKPAQAPMKPANPFNNPFAALMNVPTNKK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10761919 [H]