| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522515
Identifier: 42522515
GI number: 42522515
Start: 896179
End: 896550
Strand: Direct
Name: 42522515
Synonym: Bd0948
Alternate gene names: NA
Gene position: 896179-896550 (Clockwise)
Preceding gene: 42522514
Following gene: 42522518
Centisome position: 23.69
GC content: 52.69
Gene sequence:
>372_bases ATGAAAAAGTTGATGTTGGCATTGGCAGCACCCTTGTTGTTCTCTGTTCCTTCCTTGGCCGCCAAGAAGTTTTCCTGCCA GGGGCTGACCGAGGAGCAGGTTCCGGTATCTATCACTGTGACCGTTGATGTGAACGACTATGCCGAAGTGACATTTTCCA GTGCAGACTTTGAAAACACCTGGATTGGTGAAAACACGCGTTTGTACCGCACTATCGGTGGCATGACCAAGCTGACAACA GCTTACGGCAGCCGGGCTGAATACTTCGTGAAGCTGGAAGTGGCTGACGATGGGCAGGGCACTCTGGAGTATGAAGAGAA CGATTCCGGTTGGGAGTACTTCGCTTCCGCCCGCGTTCGGTGCACACGCTAA
Upstream 100 bases:
>100_bases GGGTGAAGTCGACATTGAAAGGTTTTGCCGTTCAGTGTGACTTGGCTGAGCCGGTTCAGTAGTTGATTTGATTTTTAGAA TGTTTTTGATGGAGATGAAG
Downstream 100 bases:
>100_bases GACAAATAAAAAAACCGAGGCTTTGAACCTCGGTTTTTTTGTTTTTGGTTATGTGGTCCGATTAGAACGGCTTGTTGATC GCAAAGATCGATGCCGTGGT
Product: putative polyketide synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MKKLMLALAAPLLFSVPSLAAKKFSCQGLTEEQVPVSITVTVDVNDYAEVTFSSADFENTWIGENTRLYRTIGGMTKLTT AYGSRAEYFVKLEVADDGQGTLEYEENDSGWEYFASARVRCTR
Sequences:
>Translated_123_residues MKKLMLALAAPLLFSVPSLAAKKFSCQGLTEEQVPVSITVTVDVNDYAEVTFSSADFENTWIGENTRLYRTIGGMTKLTT AYGSRAEYFVKLEVADDGQGTLEYEENDSGWEYFASARVRCTR >Mature_123_residues MKKLMLALAAPLLFSVPSLAAKKFSCQGLTEEQVPVSITVTVDVNDYAEVTFSSADFENTWIGENTRLYRTIGGMTKLTT AYGSRAEYFVKLEVADDGQGTLEYEENDSGWEYFASARVRCTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13684; Mature: 13684
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLMLALAAPLLFSVPSLAAKKFSCQGLTEEQVPVSITVTVDVNDYAEVTFSSADFENT CCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCC WIGENTRLYRTIGGMTKLTTAYGSRAEYFVKLEVADDGQGTLEYEENDSGWEYFASARVR CCCCCCEEEEECCCCEEEHHHCCCCCEEEEEEEECCCCCCEEEECCCCCCEEEEEECEEE CTR ECC >Mature Secondary Structure MKKLMLALAAPLLFSVPSLAAKKFSCQGLTEEQVPVSITVTVDVNDYAEVTFSSADFENT CCHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCC WIGENTRLYRTIGGMTKLTTAYGSRAEYFVKLEVADDGQGTLEYEENDSGWEYFASARVR CCCCCCEEEEECCCCEEEHHHCCCCCEEEEEEEECCCCCCEEEECCCCCCEEEEEECEEE CTR ECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA