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The map label for this gene is lysR [C]

Identifier: 42522473

GI number: 42522473

Start: 856615

End: 857406

Strand: Direct

Name: lysR [C]

Synonym: Bd0903

Alternate gene names: 42522473

Gene position: 856615-857406 (Clockwise)

Preceding gene: 42522472

Following gene: 42522476

Centisome position: 22.64

GC content: 53.41

Gene sequence:

>792_bases
GTGTCGCAGCCGGCCTTGTCCAAGGCGTTGCGCTTGCTGGAGCAAGAGGTGGGCACAAAGCTGCTGGAGCCCGAAGGGCG
GGGATTGCGCCTGACCCCGGCGGGCCAGCGTTTCAAAGATGAAACAGCGGGCTTATTGGACCAGTGGTTGAAAGTGCCCG
AAAATCTGCTTCGTTCCGATTCGGAGAAAGTTCCCTATCGCCTGGGTTCTTTTGAGGTGTTCACCACTTATTTTCTGAGT
CACTTGCTGAAATCGGTCGATCTTGGTCCGCTGGAGCTGCATGAGTACCGTCCTGGTCGTCTGGAGCAGGCCATCGCAGA
GGGAGTCGTGGATATCGGTATCACCTATGCGCCCATCCCGAAATCCGGGGTGGACTTTACTGAAGTCACAAAAATTAAAA
TGGGAATCTTTGGTCTGAAGAAGTTCAAAGGCCTGAATTGGAGTGAGCTTCCGTTTGTTGTGCCGCTGCTTCCGACACAA
GGCACGCCATCCAAAGTACAGGGCTTGGATGGCTGGCCGGATCATGAATTCAATCGCCAGATCCTTTACCGCGTCACCAT
GATGGAGTCGGCCATGGAGCTATGCCGGCAGGGGCTGTGTGTGGCCTATCTGCCGGAGTTCGTGGTCAGCTTGCACAACA
AAGCACTGCTGCCGGATTACCGTTTGATCGAGCTGGAATCACCGCTTTCCCAAAAAGAGCGAAAGCAGAGTGTGTTTTTA
ATTCAGCGAAAAAACAATCCTGAAAGCACACTGTACCGACAGATTGCCAAGAGCCTGCGTAACTTGGGTTAA

Upstream 100 bases:

>100_bases
TAAAGTTATATATAGTTAACCTATGGATATAGGACGAGTTCGATACTTTCAGGTGTTTGCAGAAACGGGGTCGTTAGTCA
GGGCGTCGGAGGTGTTGCAC

Downstream 100 bases:

>100_bases
GGGATCACAGTGGCTCTGGTCCTGCGTAGGGCTGTGGCGAAAGCGTCGGAGCAATCCGGAAATCTTTTGGAAGTTCTCCG
GTCAGACTCTGCAGGAAGGC

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MSQPALSKALRLLEQEVGTKLLEPEGRGLRLTPAGQRFKDETAGLLDQWLKVPENLLRSDSEKVPYRLGSFEVFTTYFLS
HLLKSVDLGPLELHEYRPGRLEQAIAEGVVDIGITYAPIPKSGVDFTEVTKIKMGIFGLKKFKGLNWSELPFVVPLLPTQ
GTPSKVQGLDGWPDHEFNRQILYRVTMMESAMELCRQGLCVAYLPEFVVSLHNKALLPDYRLIELESPLSQKERKQSVFL
IQRKNNPESTLYRQIAKSLRNLG

Sequences:

>Translated_263_residues
MSQPALSKALRLLEQEVGTKLLEPEGRGLRLTPAGQRFKDETAGLLDQWLKVPENLLRSDSEKVPYRLGSFEVFTTYFLS
HLLKSVDLGPLELHEYRPGRLEQAIAEGVVDIGITYAPIPKSGVDFTEVTKIKMGIFGLKKFKGLNWSELPFVVPLLPTQ
GTPSKVQGLDGWPDHEFNRQILYRVTMMESAMELCRQGLCVAYLPEFVVSLHNKALLPDYRLIELESPLSQKERKQSVFL
IQRKNNPESTLYRQIAKSLRNLG
>Mature_262_residues
SQPALSKALRLLEQEVGTKLLEPEGRGLRLTPAGQRFKDETAGLLDQWLKVPENLLRSDSEKVPYRLGSFEVFTTYFLSH
LLKSVDLGPLELHEYRPGRLEQAIAEGVVDIGITYAPIPKSGVDFTEVTKIKMGIFGLKKFKGLNWSELPFVVPLLPTQG
TPSKVQGLDGWPDHEFNRQILYRVTMMESAMELCRQGLCVAYLPEFVVSLHNKALLPDYRLIELESPLSQKERKQSVFLI
QRKNNPESTLYRQIAKSLRNLG

Specific function: Positive Regulatory Protein For The Cyn Operon. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29823; Mature: 29692

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPALSKALRLLEQEVGTKLLEPEGRGLRLTPAGQRFKDETAGLLDQWLKVPENLLRSD
CCCHHHHHHHHHHHHHHCHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC
SEKVPYRLGSFEVFTTYFLSHLLKSVDLGPLELHEYRPGRLEQAIAEGVVDIGITYAPIP
CCCCCEECCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHCCHHHHCCEECCCC
KSGVDFTEVTKIKMGIFGLKKFKGLNWSELPFVVPLLPTQGTPSKVQGLDGWPDHEFNRQ
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHCCCCCCCCCCHHCHH
ILYRVTMMESAMELCRQGLCVAYLPEFVVSLHNKALLPDYRLIELESPLSQKERKQSVFL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHCCEEE
IQRKNNPESTLYRQIAKSLRNLG
EEECCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SQPALSKALRLLEQEVGTKLLEPEGRGLRLTPAGQRFKDETAGLLDQWLKVPENLLRSD
CCHHHHHHHHHHHHHHCHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCC
SEKVPYRLGSFEVFTTYFLSHLLKSVDLGPLELHEYRPGRLEQAIAEGVVDIGITYAPIP
CCCCCEECCCHHHHHHHHHHHHHHHCCCCCHHHHCCCCCHHHHHHHCCHHHHCCEECCCC
KSGVDFTEVTKIKMGIFGLKKFKGLNWSELPFVVPLLPTQGTPSKVQGLDGWPDHEFNRQ
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCHHCCCCCCCCCCHHCHH
ILYRVTMMESAMELCRQGLCVAYLPEFVVSLHNKALLPDYRLIELESPLSQKERKQSVFL
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHCCEEE
IQRKNNPESTLYRQIAKSLRNLG
EEECCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA