| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522463
Identifier: 42522463
GI number: 42522463
Start: 846192
End: 846707
Strand: Direct
Name: 42522463
Synonym: Bd0893
Alternate gene names: NA
Gene position: 846192-846707 (Clockwise)
Preceding gene: 42522462
Following gene: 42522464
Centisome position: 22.37
GC content: 47.48
Gene sequence:
>516_bases ATGTCCAGGGCGGATCCGGTATCAAGGTCCGCCCTTTATGTTAAAGTTTTGTGTTGCTTGTGGATCTCCACCGGTTTCTA TGGCTTCTTGGCATATTTTGGATGCAATGGTTCCCAAGGTTCGGGATCCATAGTTACATGTGGCGGGATTAACCAATGGA GGTCCATCATGAACTTCAGACATCTGTTTGTCGGTTTACTTATCAGTGCAGTAGCCTGCACGTCGCTTGCAAAAGGCGAT GACTCCTATTCCACCACGAAAAAAGACACCACCACGACAGCCACTGACCAGGGGATGAAAGAAACGGATACGATTCTGAC CCGCGCTATTCGCGAAAAGATCAACAGCGATGGTTCGGTGTCGATGATGGGAAAAAACATCACCATCGTCAGTCAGAACG GCATGGTGACATTGAAAGGGGCTGTGGCCTCGCAGAATGAAAAGAACAAGATCAGCAAGATTGCCAATGAAATTTCCGGT AACAAAGTCACAGACCAGATGACGGTCAAAAAATAG
Upstream 100 bases:
>100_bases AGGAGCGCATTGATCAGGTTGTTGAGGCGGGGGACACCGCCAGCGCTTCGGTTCGTGAAGTGCGTGGGCGTCCGTTGTGG TGTCGATTCCTTGCTAGGTA
Downstream 100 bases:
>100_bases GAGTTCCAAGATGGAAAAAGGTCACAAGTCGGTTTTTGGTATTTTTAGAAATCGGGGTCAGCTAGAAAACTGTGTGGACC GCCTTAAGGCGGAAAGCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MSRADPVSRSALYVKVLCCLWISTGFYGFLAYFGCNGSQGSGSIVTCGGINQWRSIMNFRHLFVGLLISAVACTSLAKGD DSYSTTKKDTTTTATDQGMKETDTILTRAIREKINSDGSVSMMGKNITIVSQNGMVTLKGAVASQNEKNKISKIANEISG NKVTDQMTVKK
Sequences:
>Translated_171_residues MSRADPVSRSALYVKVLCCLWISTGFYGFLAYFGCNGSQGSGSIVTCGGINQWRSIMNFRHLFVGLLISAVACTSLAKGD DSYSTTKKDTTTTATDQGMKETDTILTRAIREKINSDGSVSMMGKNITIVSQNGMVTLKGAVASQNEKNKISKIANEISG NKVTDQMTVKK >Mature_170_residues SRADPVSRSALYVKVLCCLWISTGFYGFLAYFGCNGSQGSGSIVTCGGINQWRSIMNFRHLFVGLLISAVACTSLAKGDD SYSTTKKDTTTTATDQGMKETDTILTRAIREKINSDGSVSMMGKNITIVSQNGMVTLKGAVASQNEKNKISKIANEISGN KVTDQMTVKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18386; Mature: 18255
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS50914 BON
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRADPVSRSALYVKVLCCLWISTGFYGFLAYFGCNGSQGSGSIVTCGGINQWRSIMNFR CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHH HLFVGLLISAVACTSLAKGDDSYSTTKKDTTTTATDQGMKETDTILTRAIREKINSDGSV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCE SMMGKNITIVSQNGMVTLKGAVASQNEKNKISKIANEISGNKVTDQMTVKK EEECCEEEEEECCCEEEEECCHHCCCHHHHHHHHHHHHCCCCCCCCEECCC >Mature Secondary Structure SRADPVSRSALYVKVLCCLWISTGFYGFLAYFGCNGSQGSGSIVTCGGINQWRSIMNFR CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHH HLFVGLLISAVACTSLAKGDDSYSTTKKDTTTTATDQGMKETDTILTRAIREKINSDGSV HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCE SMMGKNITIVSQNGMVTLKGAVASQNEKNKISKIANEISGNKVTDQMTVKK EEECCEEEEEECCCEEEEECCHHCCCHHHHHHHHHHHHCCCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA