| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522456
Identifier: 42522456
GI number: 42522456
Start: 837945
End: 838286
Strand: Direct
Name: 42522456
Synonym: Bd0885
Alternate gene names: NA
Gene position: 837945-838286 (Clockwise)
Preceding gene: 42522455
Following gene: 42522457
Centisome position: 22.15
GC content: 46.78
Gene sequence:
>342_bases ATGCTTCCCCACATGCCACACATCAGAATGCGCGCCGTAAAAAAAGAACATGTTCAGCTGCTCAGTGACAGCCTTGCCAA AGAACTGGCTCCGGCGATGAAAACTCCGGTCGATAACTTCACTTTTGAACTGGTCCAGACACAGTTTTTCTCTGGCGGGC AGCAAACCGATTCTTATCCCTTCATTGAAGTCCTTTGGTTTGCCCGTTCTCAGGAAGTTCAGGATGAATGTGCGTCGATT ATCACCCGGCAGATCAAGTCCATCGCCGATTATGAGGATGTGGTGATTGTCTTCCAGGTTCTTGCAAAAGAAGCCTATTA TGAAAATGGGATCCATTTTTAA
Upstream 100 bases:
>100_bases TCTGCGTCGGGAAAATGCCGAACTTAAAAAACAGTTGCAGCAGCAGGCTGCGGATTTGGAACTGATCAAAACCCGTTTGG GTATCAAATAGTCCTGTGGT
Downstream 100 bases:
>100_bases ACTCTTCCTGTCAAAGTTTTAGACACCTTTTGGGCCTGCATTGCAGGGCCCTCATTGAGCTTCGCAGGGTATTTCTTTCA TAGCACCATTTCTCAAACCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 113
Protein sequence:
>113_residues MLPHMPHIRMRAVKKEHVQLLSDSLAKELAPAMKTPVDNFTFELVQTQFFSGGQQTDSYPFIEVLWFARSQEVQDECASI ITRQIKSIADYEDVVIVFQVLAKEAYYENGIHF
Sequences:
>Translated_113_residues MLPHMPHIRMRAVKKEHVQLLSDSLAKELAPAMKTPVDNFTFELVQTQFFSGGQQTDSYPFIEVLWFARSQEVQDECASI ITRQIKSIADYEDVVIVFQVLAKEAYYENGIHF >Mature_113_residues MLPHMPHIRMRAVKKEHVQLLSDSLAKELAPAMKTPVDNFTFELVQTQFFSGGQQTDSYPFIEVLWFARSQEVQDECASI ITRQIKSIADYEDVVIVFQVLAKEAYYENGIHF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13052; Mature: 13052
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPHMPHIRMRAVKKEHVQLLSDSLAKELAPAMKTPVDNFTFELVQTQFFSGGQQTDSYP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC FIEVLWFARSQEVQDECASIITRQIKSIADYEDVVIVFQVLAKEAYYENGIHF HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLPHMPHIRMRAVKKEHVQLLSDSLAKELAPAMKTPVDNFTFELVQTQFFSGGQQTDSYP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCC FIEVLWFARSQEVQDECASIITRQIKSIADYEDVVIVFQVLAKEAYYENGIHF HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA