Click here to switch to the map view.

The map label for this gene is pilN

Identifier: 42522436

GI number: 42522436

Start: 811505

End: 812116

Strand: Direct

Name: pilN

Synonym: Bd0864

Alternate gene names: NA

Gene position: 811505-812116 (Clockwise)

Preceding gene: 42522435

Following gene: 42522437

Centisome position: 21.45

GC content: 50.65

Gene sequence:

>612_bases
ATGATCAAGATCAATCTGGCATCACAAGCTTCTACCTCTGGCGGAGGCTCCATCGGGGCGTCACTGGGGATTTCATCAGA
CTCCTTTATGGGGGCCGATGAGATCCGCAAAGAGGCGTTGAAGCGTCTGGTGCTTTTGTTGATCGGACCTCTGGCATTGT
ACATTTATGAAAACCAGAACGTTCCGGGCAAAGTGGCCGAGCTGAACTCCAAAAACCAGATTCTGGTGGAGCTGCAGACT
TACAATGCCAAAGCCGCGGATTCCGTGGCCGAGATCAAAAAGTTTAAAGAGGACGAGGCCCTGATGGAGGCTCGTATCTC
GGCTTTGGAGAAAATTTCCAAAGACCGTCAGCGTGAGATCCGCGTATTGGATCTGCTGCAGACAGTGATTCCGGAAAAGG
CCTGGTTGACTCGCGTGCAGGTGAATCCGACACGTGTGAACATCCAGGGGCTGGCTTTGAGTGACTTTGAGGTCTCTCAG
TTCCTGGAAGCTCTGACCAAGAGTGTGTTCCTGATGGACGTAAACCTTGTCAGTTCCAGCGAAACGGTGACCGACGGGGT
CAGTTTGAAAAAGTTTGAAATCAGTTGTTTGTTGGAGAGAGCAAATGAATAA

Upstream 100 bases:

>100_bases
AGGCCAATCCGAAAAAGTTTTCTCCTGAATATCTTGATCAGATCAGCTCCTTTGCCGGGGTCGTGACGGGTCTTGCCCTG
CGTGAACAGGGGGATGCGAC

Downstream 100 bases:

>100_bases
GCTATTTGATCTGCTCGCAGTCCAGACAATTGGAAAAATTCTGGTGATCGGCCTGGGCCTGACCGCCATGTATTGGAACT
TCATGTACGATGACGGTTCC

Product: fimbrial assembly membrane protein

Products: NA

Alternate protein names: Tfp Pilus Assembly Protein PilN-Like

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MIKINLASQASTSGGGSIGASLGISSDSFMGADEIRKEALKRLVLLLIGPLALYIYENQNVPGKVAELNSKNQILVELQT
YNAKAADSVAEIKKFKEDEALMEARISALEKISKDRQREIRVLDLLQTVIPEKAWLTRVQVNPTRVNIQGLALSDFEVSQ
FLEALTKSVFLMDVNLVSSSETVTDGVSLKKFEISCLLERANE

Sequences:

>Translated_203_residues
MIKINLASQASTSGGGSIGASLGISSDSFMGADEIRKEALKRLVLLLIGPLALYIYENQNVPGKVAELNSKNQILVELQT
YNAKAADSVAEIKKFKEDEALMEARISALEKISKDRQREIRVLDLLQTVIPEKAWLTRVQVNPTRVNIQGLALSDFEVSQ
FLEALTKSVFLMDVNLVSSSETVTDGVSLKKFEISCLLERANE
>Mature_203_residues
MIKINLASQASTSGGGSIGASLGISSDSFMGADEIRKEALKRLVLLLIGPLALYIYENQNVPGKVAELNSKNQILVELQT
YNAKAADSVAEIKKFKEDEALMEARISALEKISKDRQREIRVLDLLQTVIPEKAWLTRVQVNPTRVNIQGLALSDFEVSQ
FLEALTKSVFLMDVNLVSSSETVTDGVSLKKFEISCLLERANE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22315; Mature: 22315

Theoretical pI: Translated: 4.95; Mature: 4.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKINLASQASTSGGGSIGASLGISSDSFMGADEIRKEALKRLVLLLIGPLALYIYENQN
CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCC
VPGKVAELNSKNQILVELQTYNAKAADSVAEIKKFKEDEALMEARISALEKISKDRQREI
CCCHHEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVLDLLQTVIPEKAWLTRVQVNPTRVNIQGLALSDFEVSQFLEALTKSVFLMDVNLVSSS
HHHHHHHHHCCCHHHEEEEEECCEEEEEEEEEECCHHHHHHHHHHHHHEEEEEEEEECCC
ETVTDGVSLKKFEISCLLERANE
CCHHCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKINLASQASTSGGGSIGASLGISSDSFMGADEIRKEALKRLVLLLIGPLALYIYENQN
CEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEECCCC
VPGKVAELNSKNQILVELQTYNAKAADSVAEIKKFKEDEALMEARISALEKISKDRQREI
CCCHHEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RVLDLLQTVIPEKAWLTRVQVNPTRVNIQGLALSDFEVSQFLEALTKSVFLMDVNLVSSS
HHHHHHHHHCCCHHHEEEEEECCEEEEEEEEEECCHHHHHHHHHHHHHEEEEEEEEECCC
ETVTDGVSLKKFEISCLLERANE
CCHHCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA